RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
UBE2E3-211ENST00000602837 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
UBE2E3-211ENST00000602837 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
UBE2E3-211ENST00000602837 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
UBE2E3-211ENST00000602837 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
UBE2E3-211ENST00000602837 FOXD1Q16676 465 aa18.66■□□□□ 0.58
UBE2E3-211ENST00000602837 ADRA2BP18089 450 aa18.33■□□□□ 0.52
UBE2E3-211ENST00000602837 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
UBE2E3-211ENST00000602837 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
UBE2E3-211ENST00000602837 KCNA4P22459 653 aa17.26■□□□□ 0.35
UBE2E3-211ENST00000602837 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
UBE2E3-211ENST00000602837 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
UBE2E3-211ENST00000602837 MSH5O43196 834 aa16.95■□□□□ 0.3
UBE2E3-211ENST00000602837 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
UBE2E3-211ENST00000602837 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
UBE2E3-211ENST00000602837 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
UBE2E3-211ENST00000602837 EHMT2Q96KQ7 1210 aa16.54■□□□□ 0.24
UBE2E3-211ENST00000602837 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
UBE2E3-211ENST00000602837 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
UBE2E3-211ENST00000602837 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
UBE2E3-211ENST00000602837 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
UBE2E3-211ENST00000602837 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
UBE2E3-211ENST00000602837 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
UBE2E3-211ENST00000602837 ZBTB22O15209 634 aa15.93■□□□□ 0.14
UBE2E3-211ENST00000602837 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
UBE2E3-211ENST00000602837 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
UBE2E3-211ENST00000602837 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
UBE2E3-211ENST00000602837 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
UBE2E3-211ENST00000602837 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
UBE2E3-211ENST00000602837 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
UBE2E3-211ENST00000602837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBE2E3-211ENST00000602837 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
UBE2E3-211ENST00000602837 CCDC180Q9P1Z9 1646 aa15.05■□□□□ -0
UBE2E3-211ENST00000602837 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
UBE2E3-211ENST00000602837 POTEDQ86YR6 584 aa15□□□□□ -0.01
UBE2E3-211ENST00000602837 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
UBE2E3-211ENST00000602837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
UBE2E3-211ENST00000602837 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
UBE2E3-211ENST00000602837 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
UBE2E3-211ENST00000602837 ABCC9O60706 1549 aa14.78□□□□□ -0.04
UBE2E3-211ENST00000602837 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
UBE2E3-211ENST00000602837 APLP2Q06481 763 aa14.58□□□□□ -0.08
UBE2E3-211ENST00000602837 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
UBE2E3-211ENST00000602837 FKBP8Q14318 412 aa14.55□□□□□ -0.08
UBE2E3-211ENST00000602837 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
UBE2E3-211ENST00000602837 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
UBE2E3-211ENST00000602837 CAPN15O75808 1086 aa14.41□□□□□ -0.1
UBE2E3-211ENST00000602837 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
UBE2E3-211ENST00000602837 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
UBE2E3-211ENST00000602837 POLA2Q14181 598 aa14.31□□□□□ -0.12
UBE2E3-211ENST00000602837 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
UBE2E3-211ENST00000602837 ABCB7O75027 752 aa14.22□□□□□ -0.13
UBE2E3-211ENST00000602837 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
UBE2E3-211ENST00000602837 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
UBE2E3-211ENST00000602837 NACADO15069 1562 aa14.17□□□□□ -0.14
UBE2E3-211ENST00000602837 FBLN2P98095 1184 aa14.14□□□□□ -0.15
UBE2E3-211ENST00000602837 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
UBE2E3-211ENST00000602837 DSG3P32926 999 aa14.07□□□□□ -0.16
UBE2E3-211ENST00000602837 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
UBE2E3-211ENST00000602837 DCAF1Q9Y4B6 1507 aa14.04□□□□□ -0.16
UBE2E3-211ENST00000602837 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
UBE2E3-211ENST00000602837 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
UBE2E3-211ENST00000602837 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
UBE2E3-211ENST00000602837 PROM2Q8N271 834 aa13.91□□□□□ -0.18
UBE2E3-211ENST00000602837 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
UBE2E3-211ENST00000602837 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBE2E3-211ENST00000602837 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
UBE2E3-211ENST00000602837 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
UBE2E3-211ENST00000602837 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
UBE2E3-211ENST00000602837 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
UBE2E3-211ENST00000602837 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
UBE2E3-211ENST00000602837 BICRAQ9NZM4 1560 aa13.74□□□□□ -0.21
UBE2E3-211ENST00000602837 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
UBE2E3-211ENST00000602837 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
UBE2E3-211ENST00000602837 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
UBE2E3-211ENST00000602837 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
UBE2E3-211ENST00000602837 SHROOM4Q9ULL8 1493 aa13.66□□□□□ -0.22
UBE2E3-211ENST00000602837 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
UBE2E3-211ENST00000602837 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
UBE2E3-211ENST00000602837 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
UBE2E3-211ENST00000602837 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
UBE2E3-211ENST00000602837 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
UBE2E3-211ENST00000602837 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
UBE2E3-211ENST00000602837 MIER1Q8N108 512 aa13.34□□□□□ -0.27
UBE2E3-211ENST00000602837 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
UBE2E3-211ENST00000602837 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
UBE2E3-211ENST00000602837 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
UBE2E3-211ENST00000602837 PKD2Q13563 968 aa13.28□□□□□ -0.28
UBE2E3-211ENST00000602837 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
UBE2E3-211ENST00000602837 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
UBE2E3-211ENST00000602837 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
UBE2E3-211ENST00000602837 SMARCA4P51532 1647 aa13.2□□□□□ -0.3
UBE2E3-211ENST00000602837 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
UBE2E3-211ENST00000602837 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
UBE2E3-211ENST00000602837 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
UBE2E3-211ENST00000602837 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
UBE2E3-211ENST00000602837 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
UBE2E3-211ENST00000602837 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
UBE2E3-211ENST00000602837 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
UBE2E3-211ENST00000602837 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms