RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
SPTBN1-204ENST00000467371 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
SPTBN1-204ENST00000467371 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
SPTBN1-204ENST00000467371 DAXXQ9UER7 740 aaPredicted RBP14.64□□□□□ -0.07
SPTBN1-204ENST00000467371 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
SPTBN1-204ENST00000467371 PLPPR3Q6T4P5 718 aa14.43□□□□□ -0.1
SPTBN1-204ENST00000467371 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
SPTBN1-204ENST00000467371 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
SPTBN1-204ENST00000467371 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-204ENST00000467371 TTBK1Q5TCY1 1321 aaPredicted RBP14.05□□□□□ -0.16
SPTBN1-204ENST00000467371 APLP2Q06481 763 aa14□□□□□ -0.17
SPTBN1-204ENST00000467371 KCNA4P22459 653 aa13.9□□□□□ -0.18
SPTBN1-204ENST00000467371 MYT1Q01538 1121 aa13.88□□□□□ -0.19
SPTBN1-204ENST00000467371 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
SPTBN1-204ENST00000467371 ARXQ96QS3 562 aa13.84□□□□□ -0.19
SPTBN1-204ENST00000467371 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
SPTBN1-204ENST00000467371 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
SPTBN1-204ENST00000467371 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-204ENST00000467371 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
SPTBN1-204ENST00000467371 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
SPTBN1-204ENST00000467371 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
SPTBN1-204ENST00000467371 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
SPTBN1-204ENST00000467371 HOMEZQ8IX15 550 aa13.29□□□□□ -0.28
SPTBN1-204ENST00000467371 RANGAP1P46060 587 aaPredicted RBP13.23□□□□□ -0.29
SPTBN1-204ENST00000467371 BCANQ96GW7 911 aa13.21□□□□□ -0.3
SPTBN1-204ENST00000467371 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
SPTBN1-204ENST00000467371 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
SPTBN1-204ENST00000467371 KLHL34Q8N239 644 aa13.07□□□□□ -0.32
SPTBN1-204ENST00000467371 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
SPTBN1-204ENST00000467371 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
SPTBN1-204ENST00000467371 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.34
SPTBN1-204ENST00000467371 PODXL2Q9NZ53 605 aa12.93□□□□□ -0.34
SPTBN1-204ENST00000467371 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-204ENST00000467371 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.38
SPTBN1-204ENST00000467371 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
SPTBN1-204ENST00000467371 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-204ENST00000467371 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
SPTBN1-204ENST00000467371 ZBTB22O15209 634 aa12.61□□□□□ -0.39
SPTBN1-204ENST00000467371 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
SPTBN1-204ENST00000467371 ADRA2BP18089 450 aa12.49□□□□□ -0.41
SPTBN1-204ENST00000467371 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
SPTBN1-204ENST00000467371 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
SPTBN1-204ENST00000467371 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
SPTBN1-204ENST00000467371 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
SPTBN1-204ENST00000467371 HRCP23327 699 aa12.34□□□□□ -0.43
SPTBN1-204ENST00000467371 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
SPTBN1-204ENST00000467371 FKBP8Q14318 412 aa12.24□□□□□ -0.45
SPTBN1-204ENST00000467371 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-204ENST00000467371 FBLN2P98095 1184 aa12.22□□□□□ -0.45
SPTBN1-204ENST00000467371 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
SPTBN1-204ENST00000467371 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
SPTBN1-204ENST00000467371 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-204ENST00000467371 BCL11AQ9H165 835 aa12.02□□□□□ -0.49
SPTBN1-204ENST00000467371 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-204ENST00000467371 SHROOM4Q9ULL8 1493 aa12.01□□□□□ -0.49
SPTBN1-204ENST00000467371 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
SPTBN1-204ENST00000467371 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
SPTBN1-204ENST00000467371 CHMP4AQ9BY43 222 aa11.97□□□□□ -0.49
SPTBN1-204ENST00000467371 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-204ENST00000467371 UBE2Q2Q8WVN8 375 aa11.92□□□□□ -0.5
SPTBN1-204ENST00000467371 IGSF3O75054 1194 aa11.88□□□□□ -0.51
SPTBN1-204ENST00000467371 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-204ENST00000467371 CDK11BP21127 795 aaKnown RBP11.85□□□□□ -0.51
SPTBN1-204ENST00000467371 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
SPTBN1-204ENST00000467371 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-204ENST00000467371 HSP90B1P14625 803 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-204ENST00000467371 BRD2P25440 801 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-204ENST00000467371 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-204ENST00000467371 NBR1Q14596 966 aa11.75□□□□□ -0.53
SPTBN1-204ENST00000467371 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-204ENST00000467371 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-204ENST00000467371 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
SPTBN1-204ENST00000467371 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-204ENST00000467371 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
SPTBN1-204ENST00000467371 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-204ENST00000467371 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
SPTBN1-204ENST00000467371 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
SPTBN1-204ENST00000467371 DHX37Q8IY37 1157 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-204ENST00000467371 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-204ENST00000467371 PDE4CQ08493 712 aa11.66□□□□□ -0.54
SPTBN1-204ENST00000467371 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
SPTBN1-204ENST00000467371 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
SPTBN1-204ENST00000467371 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
SPTBN1-204ENST00000467371 NECTIN2Q92692 538 aa11.59□□□□□ -0.55
SPTBN1-204ENST00000467371 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.55
SPTBN1-204ENST00000467371 PKD2Q13563 968 aa11.57□□□□□ -0.56
SPTBN1-204ENST00000467371 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
SPTBN1-204ENST00000467371 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
SPTBN1-204ENST00000467371 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-204ENST00000467371 PCGF6Q9BYE7 350 aa11.48□□□□□ -0.57
SPTBN1-204ENST00000467371 MYO15BQ96JP2 1530 aa11.47□□□□□ -0.57
SPTBN1-204ENST00000467371 NEFLP07196 543 aa11.47□□□□□ -0.57
SPTBN1-204ENST00000467371 C1orf115Q9H7X2 142 aa11.45□□□□□ -0.58
SPTBN1-204ENST00000467371 SENP3Q9H4L4 574 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-204ENST00000467371 ZMYND15Q9H091 742 aa11.41□□□□□ -0.58
SPTBN1-204ENST00000467371 CCDC180Q9P1Z9 1646 aa11.4□□□□□ -0.58
SPTBN1-204ENST00000467371 RGS22Q8NE09 1264 aa11.38□□□□□ -0.59
SPTBN1-204ENST00000467371 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
SPTBN1-204ENST00000467371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPTBN1-204ENST00000467371 ARID3AQ99856 593 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms