RNA–Protein interactions for RNA: ENST00000406323.3

ZNRF3-202, Transcript of zinc and ring finger 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNRF3, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3-202ENST00000406323 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
ZNRF3-202ENST00000406323 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
ZNRF3-202ENST00000406323 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
ZNRF3-202ENST00000406323 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
ZNRF3-202ENST00000406323 PELP1Q8IZL8 1130 aaKnown RBP23.79■■□□□ 1.4
ZNRF3-202ENST00000406323 ZCCHC6Q5VYS8 1495 aaKnown RBP23.78■■□□□ 1.4
ZNRF3-202ENST00000406323 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
ZNRF3-202ENST00000406323 MYO15BQ96JP2 1530 aa23.68■■□□□ 1.38
ZNRF3-202ENST00000406323 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
ZNRF3-202ENST00000406323 PCGF6Q9BYE7 350 aa23.48■■□□□ 1.35
ZNRF3-202ENST00000406323 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
ZNRF3-202ENST00000406323 HRCP23327 699 aa23.4■■□□□ 1.34
ZNRF3-202ENST00000406323 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.34
ZNRF3-202ENST00000406323 ABCC9O60706 1549 aa23.35■■□□□ 1.33
ZNRF3-202ENST00000406323 MYT1Q01538 1121 aa23.28■■□□□ 1.32
ZNRF3-202ENST00000406323 LOC105371045A0A1W2PR82 267 aa23.22■■□□□ 1.31
ZNRF3-202ENST00000406323 NACADO15069 1562 aa22.98■■□□□ 1.27
ZNRF3-202ENST00000406323 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
ZNRF3-202ENST00000406323 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
ZNRF3-202ENST00000406323 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
ZNRF3-202ENST00000406323 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
ZNRF3-202ENST00000406323 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
ZNRF3-202ENST00000406323 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
ZNRF3-202ENST00000406323 PRKCSHP14314 528 aaPredicted RBP22.36■■□□□ 1.17
ZNRF3-202ENST00000406323 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
ZNRF3-202ENST00000406323 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
ZNRF3-202ENST00000406323 RSF1Q96T23 1441 aaPredicted RBP22.2■■□□□ 1.15
ZNRF3-202ENST00000406323 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
ZNRF3-202ENST00000406323 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
ZNRF3-202ENST00000406323 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
ZNRF3-202ENST00000406323 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
ZNRF3-202ENST00000406323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
ZNRF3-202ENST00000406323 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
ZNRF3-202ENST00000406323 BCL11AQ9H165 835 aa21.88■■□□□ 1.09
ZNRF3-202ENST00000406323 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
ZNRF3-202ENST00000406323 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
ZNRF3-202ENST00000406323 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
ZNRF3-202ENST00000406323 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
ZNRF3-202ENST00000406323 WIZO95785 1651 aa21.7■■□□□ 1.06
ZNRF3-202ENST00000406323 NEUROD1Q13562 356 aa21.65■■□□□ 1.06
ZNRF3-202ENST00000406323 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
ZNRF3-202ENST00000406323 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.03
ZNRF3-202ENST00000406323 APLP2Q06481 763 aa21.5■■□□□ 1.03
ZNRF3-202ENST00000406323 ABCC8Q09428 1581 aa21.5■■□□□ 1.03
ZNRF3-202ENST00000406323 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
ZNRF3-202ENST00000406323 DIEXFQ68CQ4 756 aaKnown RBP21.48■■□□□ 1.03
ZNRF3-202ENST00000406323 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
ZNRF3-202ENST00000406323 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
ZNRF3-202ENST00000406323 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
ZNRF3-202ENST00000406323 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
ZNRF3-202ENST00000406323 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
ZNRF3-202ENST00000406323 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.02
ZNRF3-202ENST00000406323 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
ZNRF3-202ENST00000406323 SOGA1O94964 1423 aa21.37■■□□□ 1.01
ZNRF3-202ENST00000406323 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
ZNRF3-202ENST00000406323 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
ZNRF3-202ENST00000406323 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
ZNRF3-202ENST00000406323 CEP162Q5TB80 1403 aa21.29■■□□□ 1
ZNRF3-202ENST00000406323 HNRNPUL2Q1KMD3 747 aaKnown RBP21.26■□□□□ 0.99
ZNRF3-202ENST00000406323 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
ZNRF3-202ENST00000406323 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
ZNRF3-202ENST00000406323 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
ZNRF3-202ENST00000406323 HMGXB3Q12766 1538 aa21.2■□□□□ 0.99
ZNRF3-202ENST00000406323 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
ZNRF3-202ENST00000406323 CENPBP07199 599 aaPredicted RBP21.15■□□□□ 0.98
ZNRF3-202ENST00000406323 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
ZNRF3-202ENST00000406323 MIER1Q8N108 512 aa21.09■□□□□ 0.97
ZNRF3-202ENST00000406323 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.97
ZNRF3-202ENST00000406323 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.969e-6■■■■■ 50.1
ZNRF3-202ENST00000406323 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
ZNRF3-202ENST00000406323 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
ZNRF3-202ENST00000406323 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
ZNRF3-202ENST00000406323 CLIP1P30622 1438 aa20.79■□□□□ 0.92
ZNRF3-202ENST00000406323 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
ZNRF3-202ENST00000406323 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
ZNRF3-202ENST00000406323 CFTRP13569 1480 aa20.74■□□□□ 0.91
ZNRF3-202ENST00000406323 EEA1Q15075 1411 aa20.7■□□□□ 0.9
ZNRF3-202ENST00000406323 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
ZNRF3-202ENST00000406323 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
ZNRF3-202ENST00000406323 ITGAEP38570 1179 aa20.68■□□□□ 0.9
ZNRF3-202ENST00000406323 KANK4Q5T7N3 995 aaPredicted RBP20.65■□□□□ 0.9
ZNRF3-202ENST00000406323 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
ZNRF3-202ENST00000406323 CADPSQ9ULU8 1353 aa20.64■□□□□ 0.89
ZNRF3-202ENST00000406323 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
ZNRF3-202ENST00000406323 KCNH8Q96L42 1107 aa20.57■□□□□ 0.88
ZNRF3-202ENST00000406323 KIF21BO75037 1637 aa20.55■□□□□ 0.88
ZNRF3-202ENST00000406323 NESP48681 1621 aa20.52■□□□□ 0.87
ZNRF3-202ENST00000406323 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
ZNRF3-202ENST00000406323 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
ZNRF3-202ENST00000406323 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
ZNRF3-202ENST00000406323 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
ZNRF3-202ENST00000406323 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
ZNRF3-202ENST00000406323 CUX1P39880 1505 aa20.45■□□□□ 0.86
ZNRF3-202ENST00000406323 EIF5BO60841 1220 aaKnown RBP20.44■□□□□ 0.86
ZNRF3-202ENST00000406323 ANO8Q9HCE9 1232 aaPredicted RBP20.44■□□□□ 0.86
ZNRF3-202ENST00000406323 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
ZNRF3-202ENST00000406323 BCANQ96GW7 911 aa20.42■□□□□ 0.86
ZNRF3-202ENST00000406323 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
ZNRF3-202ENST00000406323 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
ZNRF3-202ENST00000406323 DAXXQ9UER7 740 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms