RNA–Protein interactions for RNA: ENST00000640465.1

ZC3H11A-215, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 1 (best)

Gene ZC3H11A, Length 4,365 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-215ENST00000640465 NISCHQ9Y2I1 1504 aa7.66□□□□□ -1.18
ZC3H11A-215ENST00000640465 CHIC1Q5VXU3 224 aa7.62□□□□□ -1.19
ZC3H11A-215ENST00000640465 MYO15BQ96JP2 1530 aa7.17□□□□□ -1.26
ZC3H11A-215ENST00000640465 EHMT2Q96KQ7 1210 aa7.16□□□□□ -1.26
ZC3H11A-215ENST00000640465 HRCP23327 699 aa7.16□□□□□ -1.26
ZC3H11A-215ENST00000640465 PPARGC1BQ86YN6 1023 aaKnown RBP7.16□□□□□ -1.26
ZC3H11A-215ENST00000640465 SLC24A1O60721 1099 aa7.04□□□□□ -1.28
ZC3H11A-215ENST00000640465 SCAF1Q9H7N4 1312 aaKnown RBP6.96□□□□□ -1.3
ZC3H11A-215ENST00000640465 PCGF6Q9BYE7 350 aa6.91□□□□□ -1.3
ZC3H11A-215ENST00000640465 AEBP2Q6ZN18 517 aaPredicted RBP6.88□□□□□ -1.31
ZC3H11A-215ENST00000640465 SHROOM4Q9ULL8 1493 aa6.83□□□□□ -1.32
ZC3H11A-215ENST00000640465 PELP1Q8IZL8 1130 aaKnown RBP6.78□□□□□ -1.32
ZC3H11A-215ENST00000640465 SUPT5HO00267 1087 aaKnown RBP6.76□□□□□ -1.33
ZC3H11A-215ENST00000640465 DCAF1Q9Y4B6 1507 aa6.75□□□□□ -1.33
ZC3H11A-215ENST00000640465 CCDC180Q9P1Z9 1646 aa6.75□□□□□ -1.33
ZC3H11A-215ENST00000640465 PLPPR3Q6T4P5 718 aa6.74□□□□□ -1.33
ZC3H11A-215ENST00000640465 LOC105371045A0A1W2PR82 267 aa6.71□□□□□ -1.34
ZC3H11A-215ENST00000640465 NEUROD1Q13562 356 aa6.67□□□□□ -1.34
ZC3H11A-215ENST00000640465 AMER1Q5JTC6 1135 aaPredicted RBP6.64□□□□□ -1.35
ZC3H11A-215ENST00000640465 ACIN1Q9UKV3 1341 aaKnown RBP6.59□□□□□ -1.35
ZC3H11A-215ENST00000640465 TRIM26Q12899 539 aaPredicted RBP6.59□□□□□ -1.35
ZC3H11A-215ENST00000640465 ZCCHC6Q5VYS8 1495 aaKnown RBP6.57□□□□□ -1.36
ZC3H11A-215ENST00000640465 GTF3C3Q9Y5Q9 886 aa6.55□□□□□ -1.36
ZC3H11A-215ENST00000640465 RANGAP1P46060 587 aaPredicted RBP6.55□□□□□ -1.36
ZC3H11A-215ENST00000640465 SLC4A1APQ9BWU0 796 aaKnown RBP6.51□□□□□ -1.37
ZC3H11A-215ENST00000640465 DCAF8L2P0C7V8 631 aa6.48□□□□□ -1.37
ZC3H11A-215ENST00000640465 FAM9AQ8IZU1 332 aaPredicted RBP6.45□□□□□ -1.38
ZC3H11A-215ENST00000640465 PHF23Q9BUL5 403 aaPredicted RBP6.45□□□□□ -1.38
ZC3H11A-215ENST00000640465 MYT1Q01538 1121 aa6.43□□□□□ -1.38
ZC3H11A-215ENST00000640465 ZEB1P37275 1124 aaPredicted RBP6.4□□□□□ -1.38
ZC3H11A-215ENST00000640465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.39□□□□□ -1.39
ZC3H11A-215ENST00000640465 TRIM41Q8WV44 630 aa6.39□□□□□ -1.39
ZC3H11A-215ENST00000640465 BCL11AQ9H165 835 aa6.38□□□□□ -1.39
ZC3H11A-215ENST00000640465 KCNA4P22459 653 aa6.38□□□□□ -1.39
ZC3H11A-215ENST00000640465 NCBP3Q53F19 620 aaKnown RBP6.36□□□□□ -1.39
ZC3H11A-215ENST00000640465 DIEXFQ68CQ4 756 aaKnown RBP6.36□□□□□ -1.39
ZC3H11A-215ENST00000640465 RTN4Q9NQC3 1192 aaKnown RBP6.35□□□□□ -1.39
ZC3H11A-215ENST00000640465 RB1CC1Q8TDY2 1594 aa6.32□□□□□ -1.4
ZC3H11A-215ENST00000640465 MIER1Q8N108 512 aa6.3□□□□□ -1.4
ZC3H11A-215ENST00000640465 SENP3Q9H4L4 574 aaPredicted RBP6.3□□□□□ -1.4
ZC3H11A-215ENST00000640465 CSRNP3Q8WYN3 585 aa6.29□□□□□ -1.4
ZC3H11A-215ENST00000640465 ABCC9O60706 1549 aa6.29□□□□□ -1.4
ZC3H11A-215ENST00000640465 TSHZ2Q9NRE2 1034 aa6.29□□□□□ -1.4
ZC3H11A-215ENST00000640465 ERICH6Q7L0X2 663 aa6.28□□□□□ -1.4
ZC3H11A-215ENST00000640465 PRKCSHP14314 528 aaPredicted RBP6.27□□□□□ -1.4
ZC3H11A-215ENST00000640465 HAP1P54257 671 aaPredicted RBP6.27□□□□□ -1.41
ZC3H11A-215ENST00000640465 YTHDC1Q96MU7 727 aaKnown RBP6.26□□□□□ -1.41
ZC3H11A-215ENST00000640465 BCANQ96GW7 911 aa6.26□□□□□ -1.41
ZC3H11A-215ENST00000640465 SUPT16HQ9Y5B9 1047 aaKnown RBP6.24□□□□□ -1.41
ZC3H11A-215ENST00000640465 EIF4G1Q04637 1599 aaKnown RBP6.24□□□□□ -1.41
ZC3H11A-215ENST00000640465 ANP32EQ9BTT0 268 aa6.24□□□□□ -1.41
ZC3H11A-215ENST00000640465 CENPBP07199 599 aaPredicted RBP6.23□□□□□ -1.41
ZC3H11A-215ENST00000640465 RSF1Q96T23 1441 aaPredicted RBP6.23□□□□□ -1.41
ZC3H11A-215ENST00000640465 CCER1Q8TC90 406 aaPredicted RBP6.21□□□□□ -1.42
ZC3H11A-215ENST00000640465 DAXXQ9UER7 740 aaPredicted RBP6.2□□□□□ -1.42
ZC3H11A-215ENST00000640465 ZNF316A6NFI3 1004 aaPredicted RBP6.19□□□□□ -1.42
ZC3H11A-215ENST00000640465 MSH5O43196 834 aa6.18□□□□□ -1.42
ZC3H11A-215ENST00000640465 TTBK1Q5TCY1 1321 aaPredicted RBP6.16□□□□□ -1.42
ZC3H11A-215ENST00000640465 KCNH8Q96L42 1107 aa6.16□□□□□ -1.42
ZC3H11A-215ENST00000640465 WRNQ14191 1432 aaPredicted RBP eCLIP6.16□□□□□ -1.42
ZC3H11A-215ENST00000640465 ABCC8Q09428 1581 aa6.12□□□□□ -1.43
ZC3H11A-215ENST00000640465 WIZO95785 1651 aa6.1□□□□□ -1.43
ZC3H11A-215ENST00000640465 HOMEZQ8IX15 550 aa6.09□□□□□ -1.43
ZC3H11A-215ENST00000640465 RUSC2Q8N2Y8 1516 aa6.09□□□□□ -1.43
ZC3H11A-215ENST00000640465 CCDC88BA6NC98 1476 aa6.08□□□□□ -1.44
ZC3H11A-215ENST00000640465 CECR2Q9BXF3 1484 aa6.08□□□□□ -1.44
ZC3H11A-215ENST00000640465 CEP162Q5TB80 1403 aa6.07□□□□□ -1.44
ZC3H11A-215ENST00000640465 MROH2BQ7Z745 1585 aa6.07□□□□□ -1.44
ZC3H11A-215ENST00000640465 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.06□□□□□ -1.44
ZC3H11A-215ENST00000640465 SCRIBQ14160 1630 aa6.06□□□□□ -1.44
ZC3H11A-215ENST00000640465 NACADO15069 1562 aa6.06□□□□□ -1.44
ZC3H11A-215ENST00000640465 TPRNQ4KMQ1 711 aa6.06□□□□□ -1.44
ZC3H11A-215ENST00000640465 FKBP8Q14318 412 aa6.06□□□□□ -1.44
ZC3H11A-215ENST00000640465 RBM19Q9Y4C8 960 aaKnown RBP6.06□□□□□ -1.44
ZC3H11A-215ENST00000640465 ARXQ96QS3 562 aa6.05□□□□□ -1.44
ZC3H11A-215ENST00000640465 ANO8Q9HCE9 1232 aaPredicted RBP6.05□□□□□ -1.44
ZC3H11A-215ENST00000640465 SOGA1O94964 1423 aa6.04□□□□□ -1.44
ZC3H11A-215ENST00000640465 NBR1Q14596 966 aa6.04□□□□□ -1.44
ZC3H11A-215ENST00000640465 C14orf37Q86TY3 774 aa6.01□□□□□ -1.45
ZC3H11A-215ENST00000640465 DHX57Q6P158 1386 aaKnown RBP6□□□□□ -1.45
ZC3H11A-215ENST00000640465 ITGAEP38570 1179 aa5.99□□□□□ -1.45
ZC3H11A-215ENST00000640465 APLP2Q06481 763 aa5.98□□□□□ -1.45
ZC3H11A-215ENST00000640465 TNIKQ9UKE5 1360 aa5.97□□□□□ -1.45
ZC3H11A-215ENST00000640465 TULP1O00294 542 aaPredicted RBP5.97□□□□□ -1.45
ZC3H11A-215ENST00000640465 BAZ1AQ9NRL2 1556 aaPredicted RBP5.97□□□□□ -1.45
ZC3H11A-215ENST00000640465 SALL2Q9Y467 1007 aaPredicted RBP5.97□□□□□ -1.45
ZC3H11A-215ENST00000640465 HNRNPUL2Q1KMD3 747 aaKnown RBP5.97□□□□□ -1.45
ZC3H11A-215ENST00000640465 TAOK2Q9UL54 1235 aa5.96□□□□□ -1.45
ZC3H11A-215ENST00000640465 MAPKBP1O60336 1514 aa5.96□□□□□ -1.46
ZC3H11A-215ENST00000640465 PPP4R3CPQ6ZMV5 832 aa5.95□□□□□ -1.46
ZC3H11A-215ENST00000640465 CLSPNQ9HAW4 1339 aa5.94□□□□□ -1.46
ZC3H11A-215ENST00000640465 ADRA2BP18089 450 aa5.94□□□□□ -1.46
ZC3H11A-215ENST00000640465 CLIP1P30622 1438 aa5.93□□□□□ -1.46
ZC3H11A-215ENST00000640465 WDR97A6NE52 1622 aa5.93□□□□□ -1.46
ZC3H11A-215ENST00000640465 MYT1LQ9UL68 1186 aa5.92□□□□□ -1.46
ZC3H11A-215ENST00000640465 SMARCA2P51531 1590 aa5.92□□□□□ -1.46
ZC3H11A-215ENST00000640465 PLCB2Q00722 1185 aa5.92□□□□□ -1.46
ZC3H11A-215ENST00000640465 CCDC136Q96JN2 1154 aa5.91□□□□□ -1.46
ZC3H11A-215ENST00000640465 FANCIQ9NVI1 1328 aa5.91□□□□□ -1.46
ZC3H11A-215ENST00000640465 PAK3O75914 559 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms