RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 NISCHQ9Y2I1 1504 aa44.67■■■■■ 4.74
UBE2E3-209ENST00000602710 CCDC180Q9P1Z9 1646 aa39.26■■■■□ 3.88
UBE2E3-209ENST00000602710 ABCC9O60706 1549 aa37.75■■■■□ 3.63
UBE2E3-209ENST00000602710 ZCCHC6Q5VYS8 1495 aaKnown RBP37.38■■■■□ 3.57
UBE2E3-209ENST00000602710 DCAF8L2P0C7V8 631 aa37.12■■■■□ 3.53
UBE2E3-209ENST00000602710 DCAF1Q9Y4B6 1507 aa36.91■■■■□ 3.5
UBE2E3-209ENST00000602710 NACADO15069 1562 aa36.72■■■■□ 3.47
UBE2E3-209ENST00000602710 MYO15BQ96JP2 1530 aa36.72■■■■□ 3.47
UBE2E3-209ENST00000602710 RB1CC1Q8TDY2 1594 aa36.57■■■■□ 3.44
UBE2E3-209ENST00000602710 SCRIBQ14160 1630 aa36.02■■■■□ 3.36
UBE2E3-209ENST00000602710 SHROOM4Q9ULL8 1493 aa35.98■■■■□ 3.35
UBE2E3-209ENST00000602710 UNC13AQ9UPW8 1703 aa35.84■■■■□ 3.33
UBE2E3-209ENST00000602710 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.27
UBE2E3-209ENST00000602710 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
UBE2E3-209ENST00000602710 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
UBE2E3-209ENST00000602710 BAZ1AQ9NRL2 1556 aaPredicted RBP34.53■■■■□ 3.12
UBE2E3-209ENST00000602710 MROH2BQ7Z745 1585 aa34.5■■■■□ 3.11
UBE2E3-209ENST00000602710 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
UBE2E3-209ENST00000602710 EIF4G1Q04637 1599 aaKnown RBP34.47■■■■□ 3.11
UBE2E3-209ENST00000602710 RSF1Q96T23 1441 aaPredicted RBP34.4■■■■□ 3.1
UBE2E3-209ENST00000602710 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
UBE2E3-209ENST00000602710 WIZO95785 1651 aa34.19■■■■□ 3.06
UBE2E3-209ENST00000602710 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
UBE2E3-209ENST00000602710 ATAD2BQ9ULI0 1458 aa34.09■■■■□ 3.05
UBE2E3-209ENST00000602710 PEG3Q9GZU2 1588 aa34.08■■■■□ 3.05
UBE2E3-209ENST00000602710 SMARCA2P51531 1590 aa34.03■■■■□ 3.04
UBE2E3-209ENST00000602710 DNAJC5BQ9UF47 199 aa33.94■■■■□ 3.02
UBE2E3-209ENST00000602710 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
UBE2E3-209ENST00000602710 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
UBE2E3-209ENST00000602710 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
UBE2E3-209ENST00000602710 HMGXB3Q12766 1538 aa33.79■■■■□ 3
UBE2E3-209ENST00000602710 CCDC88BA6NC98 1476 aa33.45■■■□□ 2.95
UBE2E3-209ENST00000602710 CADPSQ9ULU8 1353 aa32.98■■■□□ 2.87
UBE2E3-209ENST00000602710 CFTRP13569 1480 aa32.97■■■□□ 2.87
UBE2E3-209ENST00000602710 NESP48681 1621 aa32.94■■■□□ 2.86
UBE2E3-209ENST00000602710 LAMC3Q9Y6N6 1575 aa32.85■■■□□ 2.85
UBE2E3-209ENST00000602710 PRDM2Q13029 1718 aa32.76■■■□□ 2.83
UBE2E3-209ENST00000602710 FANCD2Q9BXW9 1451 aa32.62■■■□□ 2.81
UBE2E3-209ENST00000602710 PDS5BQ9NTI5 1447 aa32.62■■■□□ 2.81
UBE2E3-209ENST00000602710 ABCC8Q09428 1581 aa32.54■■■□□ 2.8
UBE2E3-209ENST00000602710 KIF21AQ7Z4S6 1674 aa32.54■■■□□ 2.8
UBE2E3-209ENST00000602710 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
UBE2E3-209ENST00000602710 CHIC1Q5VXU3 224 aa32.46■■■□□ 2.79
UBE2E3-209ENST00000602710 ERCC6Q03468 1493 aa32.41■■■□□ 2.78
UBE2E3-209ENST00000602710 WRNQ14191 1432 aaPredicted RBP eCLIP32.38■■■□□ 2.77
UBE2E3-209ENST00000602710 CUX1P39880 1505 aa32.3■■■□□ 2.76
UBE2E3-209ENST00000602710 SYNJ1O43426 1573 aa32.29■■■□□ 2.76
UBE2E3-209ENST00000602710 TRIM41Q8WV44 630 aa32.27■■■□□ 2.76
UBE2E3-209ENST00000602710 URB2Q14146 1524 aaKnown RBP32.26■■■□□ 2.76
UBE2E3-209ENST00000602710 MRC2Q9UBG0 1479 aa32.24■■■□□ 2.75
UBE2E3-209ENST00000602710 TOP2BQ02880 1626 aa32.2■■■□□ 2.75
UBE2E3-209ENST00000602710 DNMBPQ6XZF7 1577 aa32.2■■■□□ 2.75
UBE2E3-209ENST00000602710 TOPBP1Q92547 1522 aa32.2■■■□□ 2.75
UBE2E3-209ENST00000602710 BIVM-ERCC5R4GMW8 1640 aa32.18■■■□□ 2.74
UBE2E3-209ENST00000602710 THOC2Q8NI27 1593 aaKnown RBP32.17■■■□□ 2.74
UBE2E3-209ENST00000602710 WDR62O43379 1518 aa32.1■■■□□ 2.73
UBE2E3-209ENST00000602710 FGD5Q6ZNL6 1462 aa32.04■■■□□ 2.72
UBE2E3-209ENST00000602710 POLA1P09884 1462 aaPredicted RBP31.99■■■□□ 2.71
UBE2E3-209ENST00000602710 RAD54L2Q9Y4B4 1467 aa31.9■■■□□ 2.7
UBE2E3-209ENST00000602710 SOGA1O94964 1423 aa31.88■■■□□ 2.69
UBE2E3-209ENST00000602710 CUX2O14529 1486 aa31.87■■■□□ 2.69
UBE2E3-209ENST00000602710 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
UBE2E3-209ENST00000602710 ABCA10Q8WWZ4 1543 aa31.74■■■□□ 2.67
UBE2E3-209ENST00000602710 IFT140Q96RY7 1462 aa31.73■■■□□ 2.67
UBE2E3-209ENST00000602710 RUSC2Q8N2Y8 1516 aa31.72■■■□□ 2.67
UBE2E3-209ENST00000602710 WDR97A6NE52 1622 aa31.71■■■□□ 2.67
UBE2E3-209ENST00000602710 FAM9AQ8IZU1 332 aaPredicted RBP31.68■■■□□ 2.66
UBE2E3-209ENST00000602710 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
UBE2E3-209ENST00000602710 KIF27Q86VH2 1401 aa31.62■■■□□ 2.65
UBE2E3-209ENST00000602710 ZNF608Q9ULD9 1512 aaPredicted RBP31.61■■■□□ 2.65
UBE2E3-209ENST00000602710 AQRO60306 1485 aaKnown RBP eCLIP31.55■■■□□ 2.64
UBE2E3-209ENST00000602710 ABCA5Q8WWZ7 1642 aa31.54■■■□□ 2.64
UBE2E3-209ENST00000602710 EEA1Q15075 1411 aa31.54■■■□□ 2.64
UBE2E3-209ENST00000602710 GAPVD1Q14C86 1478 aa31.51■■■□□ 2.63
UBE2E3-209ENST00000602710 EIF4G3O43432 1585 aaKnown RBP31.48■■■□□ 2.63
UBE2E3-209ENST00000602710 CSRNP3Q8WYN3 585 aa31.47■■■□□ 2.63
UBE2E3-209ENST00000602710 IGF1RP08069 1367 aa31.44■■■□□ 2.62
UBE2E3-209ENST00000602710 PBRM1Q86U86 1689 aa31.39■■■□□ 2.62
UBE2E3-209ENST00000602710 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
UBE2E3-209ENST00000602710 ERICH3Q5RHP9 1530 aa31.35■■■□□ 2.61
UBE2E3-209ENST00000602710 EHMT2Q96KQ7 1210 aa31.27■■■□□ 2.6
UBE2E3-209ENST00000602710 CARMIL1Q5VZK9 1371 aa31.26■■■□□ 2.59
UBE2E3-209ENST00000602710 PRXQ9BXM0 1461 aa31.25■■■□□ 2.59
UBE2E3-209ENST00000602710 SNAPC4Q5SXM2 1469 aa31.24■■■□□ 2.59
UBE2E3-209ENST00000602710 CUL7Q14999 1698 aa31.22■■■□□ 2.59
UBE2E3-209ENST00000602710 LOC105371045A0A1W2PR82 267 aa31.22■■■□□ 2.59
UBE2E3-209ENST00000602710 KIF21BO75037 1637 aa31.19■■■□□ 2.58
UBE2E3-209ENST00000602710 ADAMTS12P58397 1594 aa31.17■■■□□ 2.58
UBE2E3-209ENST00000602710 MAGI1Q96QZ7 1491 aaPredicted RBP31.17■■■□□ 2.58
UBE2E3-209ENST00000602710 RAPGEF2Q9Y4G8 1499 aa31.16■■■□□ 2.58
UBE2E3-209ENST00000602710 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
UBE2E3-209ENST00000602710 GOLGA3Q08378 1498 aa31.08■■■□□ 2.57
UBE2E3-209ENST00000602710 SYNJ2O15056 1496 aa31.06■■■□□ 2.56
UBE2E3-209ENST00000602710 FBLN2P98095 1184 aa31.04■■■□□ 2.56
UBE2E3-209ENST00000602710 CHMP7Q8WUX9 453 aaPredicted RBP31.03■■■□□ 2.56
UBE2E3-209ENST00000602710 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
UBE2E3-209ENST00000602710 GRIN2AQ12879 1464 aa30.98■■■□□ 2.55
UBE2E3-209ENST00000602710 CHD1O14646 1710 aa30.94■■■□□ 2.54
UBE2E3-209ENST00000602710 TNIKQ9UKE5 1360 aa30.87■■■□□ 2.53
UBE2E3-209ENST00000602710 CEP170Q5SW79 1584 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms