RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
UBE2E3-214ENST00000602970 CHIC1Q5VXU3 224 aa30.32■■■□□ 2.44
UBE2E3-214ENST00000602970 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
UBE2E3-214ENST00000602970 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
UBE2E3-214ENST00000602970 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
UBE2E3-214ENST00000602970 FOXD1Q16676 465 aa25.34■■□□□ 1.65
UBE2E3-214ENST00000602970 CCDC180Q9P1Z9 1646 aa24.55■■□□□ 1.52
UBE2E3-214ENST00000602970 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
UBE2E3-214ENST00000602970 PPP6R1Q9UPN7 881 aa23.74■■□□□ 1.39
UBE2E3-214ENST00000602970 PIAS4Q8N2W9 510 aaPredicted RBP23.72■■□□□ 1.39
UBE2E3-214ENST00000602970 MSH5O43196 834 aa23.69■■□□□ 1.38
UBE2E3-214ENST00000602970 ADRA2BP18089 450 aa23.68■■□□□ 1.38
UBE2E3-214ENST00000602970 POTEDQ86YR6 584 aa23.54■■□□□ 1.36
UBE2E3-214ENST00000602970 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
UBE2E3-214ENST00000602970 ABCC9O60706 1549 aa23.25■■□□□ 1.31
UBE2E3-214ENST00000602970 DCAF1Q9Y4B6 1507 aa23.1■■□□□ 1.29
UBE2E3-214ENST00000602970 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
UBE2E3-214ENST00000602970 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
UBE2E3-214ENST00000602970 NACADO15069 1562 aa22.84■■□□□ 1.25
UBE2E3-214ENST00000602970 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
UBE2E3-214ENST00000602970 SHROOM4Q9ULL8 1493 aa22.49■■□□□ 1.19
UBE2E3-214ENST00000602970 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
UBE2E3-214ENST00000602970 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
UBE2E3-214ENST00000602970 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
UBE2E3-214ENST00000602970 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
UBE2E3-214ENST00000602970 MAPK8IP2Q13387 824 aaPredicted RBP21.73■■□□□ 1.07
UBE2E3-214ENST00000602970 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
UBE2E3-214ENST00000602970 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.05
UBE2E3-214ENST00000602970 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.05
UBE2E3-214ENST00000602970 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
UBE2E3-214ENST00000602970 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
UBE2E3-214ENST00000602970 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
UBE2E3-214ENST00000602970 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
UBE2E3-214ENST00000602970 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
UBE2E3-214ENST00000602970 WIZO95785 1651 aa21.37■■□□□ 1.01
UBE2E3-214ENST00000602970 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
UBE2E3-214ENST00000602970 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
UBE2E3-214ENST00000602970 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
UBE2E3-214ENST00000602970 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
UBE2E3-214ENST00000602970 TOP2AP11388 1531 aaKnown RBP21.17■□□□□ 0.98
UBE2E3-214ENST00000602970 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
UBE2E3-214ENST00000602970 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
UBE2E3-214ENST00000602970 BAZ1BQ9UIG0 1483 aaKnown RBP21.06■□□□□ 0.96
UBE2E3-214ENST00000602970 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
UBE2E3-214ENST00000602970 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
UBE2E3-214ENST00000602970 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
UBE2E3-214ENST00000602970 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
UBE2E3-214ENST00000602970 HOXD11P31277 338 aaPredicted RBP20.78■□□□□ 0.92
UBE2E3-214ENST00000602970 DCAF8L1A6NGE4 600 aa20.74■□□□□ 0.91
UBE2E3-214ENST00000602970 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
UBE2E3-214ENST00000602970 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
UBE2E3-214ENST00000602970 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
UBE2E3-214ENST00000602970 CFTRP13569 1480 aa20.5■□□□□ 0.87
UBE2E3-214ENST00000602970 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
UBE2E3-214ENST00000602970 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
UBE2E3-214ENST00000602970 LAMC3Q9Y6N6 1575 aa20.41■□□□□ 0.86
UBE2E3-214ENST00000602970 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
UBE2E3-214ENST00000602970 NESP48681 1621 aa20.35■□□□□ 0.85
UBE2E3-214ENST00000602970 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
UBE2E3-214ENST00000602970 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.83
UBE2E3-214ENST00000602970 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
UBE2E3-214ENST00000602970 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
UBE2E3-214ENST00000602970 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
UBE2E3-214ENST00000602970 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
UBE2E3-214ENST00000602970 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
UBE2E3-214ENST00000602970 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
UBE2E3-214ENST00000602970 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
UBE2E3-214ENST00000602970 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
UBE2E3-214ENST00000602970 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
UBE2E3-214ENST00000602970 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
UBE2E3-214ENST00000602970 CUX1P39880 1505 aa20.16■□□□□ 0.82
UBE2E3-214ENST00000602970 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
UBE2E3-214ENST00000602970 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
UBE2E3-214ENST00000602970 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.79
UBE2E3-214ENST00000602970 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
UBE2E3-214ENST00000602970 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
UBE2E3-214ENST00000602970 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
UBE2E3-214ENST00000602970 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
UBE2E3-214ENST00000602970 C1QBPQ07021 282 aaKnown RBP19.92■□□□□ 0.78
UBE2E3-214ENST00000602970 WDR62O43379 1518 aa19.91■□□□□ 0.78
UBE2E3-214ENST00000602970 SOGA1O94964 1423 aa19.9■□□□□ 0.78
UBE2E3-214ENST00000602970 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
UBE2E3-214ENST00000602970 EEA1Q15075 1411 aa19.89■□□□□ 0.77
UBE2E3-214ENST00000602970 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
UBE2E3-214ENST00000602970 KCNA4P22459 653 aa19.85■□□□□ 0.77
UBE2E3-214ENST00000602970 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
UBE2E3-214ENST00000602970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.77
UBE2E3-214ENST00000602970 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
UBE2E3-214ENST00000602970 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
UBE2E3-214ENST00000602970 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
UBE2E3-214ENST00000602970 CUX2O14529 1486 aa19.78■□□□□ 0.76
UBE2E3-214ENST00000602970 KIF27Q86VH2 1401 aa19.77■□□□□ 0.76
UBE2E3-214ENST00000602970 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
UBE2E3-214ENST00000602970 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
UBE2E3-214ENST00000602970 KIF21BO75037 1637 aa19.69■□□□□ 0.74
UBE2E3-214ENST00000602970 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
UBE2E3-214ENST00000602970 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
UBE2E3-214ENST00000602970 PBRM1Q86U86 1689 aa19.63■□□□□ 0.73
UBE2E3-214ENST00000602970 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
UBE2E3-214ENST00000602970 GOLGA3Q08378 1498 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms