RNA–Protein interactions for RNA: ENST00000265073.8

SUB1-201, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUB1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-201ENST00000265073 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
SUB1-201ENST00000265073 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
SUB1-201ENST00000265073 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
SUB1-201ENST00000265073 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
SUB1-201ENST00000265073 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
SUB1-201ENST00000265073 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
SUB1-201ENST00000265073 ABCC9O60706 1549 aa15.7■□□□□ 0.1
SUB1-201ENST00000265073 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
SUB1-201ENST00000265073 DCAF1Q9Y4B6 1507 aa15.28■□□□□ 0.04
SUB1-201ENST00000265073 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0.01
SUB1-201ENST00000265073 NACADO15069 1562 aa15.02■□□□□ -0
SUB1-201ENST00000265073 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
SUB1-201ENST00000265073 CHIC1Q5VXU3 224 aa14.97□□□□□ -0.01
SUB1-201ENST00000265073 MYO15BQ96JP2 1530 aa14.93□□□□□ -0.02
SUB1-201ENST00000265073 RB1CC1Q8TDY2 1594 aa14.93□□□□□ -0.02
SUB1-201ENST00000265073 RSF1Q96T23 1441 aaPredicted RBP14.9□□□□□ -0.02
SUB1-201ENST00000265073 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
SUB1-201ENST00000265073 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
SUB1-201ENST00000265073 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
SUB1-201ENST00000265073 LOC105371045A0A1W2PR82 267 aa14.72□□□□□ -0.05
SUB1-201ENST00000265073 UNC13AQ9UPW8 1703 aa14.71□□□□□ -0.05
SUB1-201ENST00000265073 WIZO95785 1651 aa14.7□□□□□ -0.06
SUB1-201ENST00000265073 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
SUB1-201ENST00000265073 BICRAQ9NZM4 1560 aa14.57□□□□□ -0.08
SUB1-201ENST00000265073 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
SUB1-201ENST00000265073 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
SUB1-201ENST00000265073 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
SUB1-201ENST00000265073 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
SUB1-201ENST00000265073 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
SUB1-201ENST00000265073 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
SUB1-201ENST00000265073 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
SUB1-201ENST00000265073 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
SUB1-201ENST00000265073 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
SUB1-201ENST00000265073 BAZ1BQ9UIG0 1483 aaKnown RBP14.24□□□□□ -0.13
SUB1-201ENST00000265073 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
SUB1-201ENST00000265073 RANGAP1P46060 587 aaPredicted RBP14.16□□□□□ -0.14
SUB1-201ENST00000265073 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
SUB1-201ENST00000265073 SOGA1O94964 1423 aa14.12□□□□□ -0.15
SUB1-201ENST00000265073 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
SUB1-201ENST00000265073 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
SUB1-201ENST00000265073 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
SUB1-201ENST00000265073 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
SUB1-201ENST00000265073 WRNQ14191 1432 aaPredicted RBP eCLIP14.03□□□□□ -0.16
SUB1-201ENST00000265073 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
SUB1-201ENST00000265073 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
SUB1-201ENST00000265073 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
SUB1-201ENST00000265073 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
SUB1-201ENST00000265073 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
SUB1-201ENST00000265073 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
SUB1-201ENST00000265073 NESP48681 1621 aa13.84□□□□□ -0.19
SUB1-201ENST00000265073 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
SUB1-201ENST00000265073 CEP162Q5TB80 1403 aa13.78□□□□□ -0.2
SUB1-201ENST00000265073 CFTRP13569 1480 aa13.78□□□□□ -0.2
SUB1-201ENST00000265073 HRCP23327 699 aa13.76□□□□□ -0.21
SUB1-201ENST00000265073 CUX1P39880 1505 aa13.76□□□□□ -0.21
SUB1-201ENST00000265073 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
SUB1-201ENST00000265073 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
SUB1-201ENST00000265073 GOLGA3Q08378 1498 aa13.69□□□□□ -0.22
SUB1-201ENST00000265073 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
SUB1-201ENST00000265073 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
SUB1-201ENST00000265073 EEA1Q15075 1411 aa13.67□□□□□ -0.22
SUB1-201ENST00000265073 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
SUB1-201ENST00000265073 CUX2O14529 1486 aa13.65□□□□□ -0.22
SUB1-201ENST00000265073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
SUB1-201ENST00000265073 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
SUB1-201ENST00000265073 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
SUB1-201ENST00000265073 CLIP1P30622 1438 aa13.62□□□□□ -0.23
SUB1-201ENST00000265073 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
SUB1-201ENST00000265073 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
SUB1-201ENST00000265073 ATP1B4Q9UN42 357 aaPredicted RBP13.6□□□□□ -0.23
SUB1-201ENST00000265073 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
SUB1-201ENST00000265073 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
SUB1-201ENST00000265073 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
SUB1-201ENST00000265073 APLP2Q06481 763 aa13.57□□□□□ -0.24
SUB1-201ENST00000265073 IGF1RP08069 1367 aa13.54□□□□□ -0.24
SUB1-201ENST00000265073 KIF21BO75037 1637 aa13.51□□□□□ -0.25
SUB1-201ENST00000265073 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
SUB1-201ENST00000265073 TOPBP1Q92547 1522 aa13.5□□□□□ -0.25
SUB1-201ENST00000265073 PRXQ9BXM0 1461 aa13.5□□□□□ -0.25
SUB1-201ENST00000265073 CCER1Q8TC90 406 aaPredicted RBP13.5□□□□□ -0.25
SUB1-201ENST00000265073 POLA1P09884 1462 aaPredicted RBP13.5□□□□□ -0.25
SUB1-201ENST00000265073 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
SUB1-201ENST00000265073 KANK4Q5T7N3 995 aaPredicted RBP13.48□□□□□ -0.25
SUB1-201ENST00000265073 ITGAEP38570 1179 aa13.47□□□□□ -0.25
SUB1-201ENST00000265073 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
SUB1-201ENST00000265073 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
SUB1-201ENST00000265073 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
SUB1-201ENST00000265073 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
SUB1-201ENST00000265073 KIF21AQ7Z4S6 1674 aa13.42□□□□□ -0.26
SUB1-201ENST00000265073 VPS8Q8N3P4 1428 aa13.42□□□□□ -0.26
SUB1-201ENST00000265073 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
SUB1-201ENST00000265073 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
SUB1-201ENST00000265073 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.275e-10■■■■■ 39.2
SUB1-201ENST00000265073 FBLN2P98095 1184 aa13.38□□□□□ -0.27
SUB1-201ENST00000265073 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
SUB1-201ENST00000265073 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
SUB1-201ENST00000265073 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
SUB1-201ENST00000265073 FHOD3Q2V2M9 1422 aa13.33□□□□□ -0.28
SUB1-201ENST00000265073 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
SUB1-201ENST00000265073 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms