RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
NCKAP1-202ENST00000361354 MYT1Q01538 1121 aa13.49□□□□□ -0.25
NCKAP1-202ENST00000361354 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.25
NCKAP1-202ENST00000361354 CCER1Q8TC90 406 aaPredicted RBP13.4□□□□□ -0.26
NCKAP1-202ENST00000361354 DCAF8L2P0C7V8 631 aa13.33□□□□□ -0.28
NCKAP1-202ENST00000361354 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
NCKAP1-202ENST00000361354 YTHDC1Q96MU7 727 aaKnown RBP13□□□□□ -0.33
NCKAP1-202ENST00000361354 APLP2Q06481 763 aa12.91□□□□□ -0.34
NCKAP1-202ENST00000361354 NEFLP07196 543 aa12.88□□□□□ -0.35
NCKAP1-202ENST00000361354 SUPT5HO00267 1087 aaKnown RBP12.83□□□□□ -0.36
NCKAP1-202ENST00000361354 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
NCKAP1-202ENST00000361354 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
NCKAP1-202ENST00000361354 FAM9AQ8IZU1 332 aaPredicted RBP12.7□□□□□ -0.38
NCKAP1-202ENST00000361354 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
NCKAP1-202ENST00000361354 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
NCKAP1-202ENST00000361354 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
NCKAP1-202ENST00000361354 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
NCKAP1-202ENST00000361354 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
NCKAP1-202ENST00000361354 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
NCKAP1-202ENST00000361354 CLSPNQ9HAW4 1339 aa12.16□□□□□ -0.46
NCKAP1-202ENST00000361354 GLIPR1L2Q4G1C9 344 aa12.12□□□□□ -0.47
NCKAP1-202ENST00000361354 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
NCKAP1-202ENST00000361354 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
NCKAP1-202ENST00000361354 POLR3GLQ9BT43 218 aa11.98□□□□□ -0.49
NCKAP1-202ENST00000361354 UBTFP17480 764 aaKnown RBP11.96□□□□□ -0.49
NCKAP1-202ENST00000361354 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
NCKAP1-202ENST00000361354 ANP32BQ92688 251 aaKnown RBP11.92□□□□□ -0.5
NCKAP1-202ENST00000361354 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
NCKAP1-202ENST00000361354 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
NCKAP1-202ENST00000361354 HRCP23327 699 aa11.88□□□□□ -0.51
NCKAP1-202ENST00000361354 CDK11AQ9UQ88 783 aaPredicted RBP11.85□□□□□ -0.51
NCKAP1-202ENST00000361354 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
NCKAP1-202ENST00000361354 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.51
NCKAP1-202ENST00000361354 ANP32AP39687 249 aaKnown RBP11.8□□□□□ -0.52
NCKAP1-202ENST00000361354 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
NCKAP1-202ENST00000361354 CNGB1Q14028 1251 aaPredicted RBP11.76□□□□□ -0.53
NCKAP1-202ENST00000361354 NISCHQ9Y2I1 1504 aa11.73□□□□□ -0.53
NCKAP1-202ENST00000361354 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
NCKAP1-202ENST00000361354 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
NCKAP1-202ENST00000361354 HSP90AA1P07900 732 aaKnown RBP11.67□□□□□ -0.54
NCKAP1-202ENST00000361354 BCANQ96GW7 911 aa11.66□□□□□ -0.54
NCKAP1-202ENST00000361354 ITGAEP38570 1179 aa11.65□□□□□ -0.54
NCKAP1-202ENST00000361354 TNNT2P45379 298 aaPredicted RBP11.65□□□□□ -0.54
NCKAP1-202ENST00000361354 PPARGC1BQ86YN6 1023 aaKnown RBP11.62□□□□□ -0.55
NCKAP1-202ENST00000361354 GTF3C3Q9Y5Q9 886 aa11.62□□□□□ -0.55
NCKAP1-202ENST00000361354 NEFMP07197 916 aa11.6□□□□□ -0.55
NCKAP1-202ENST00000361354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
NCKAP1-202ENST00000361354 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
NCKAP1-202ENST00000361354 UPF2Q9HAU5 1272 aaKnown RBP11.59□□□□□ -0.55
NCKAP1-202ENST00000361354 CHIC1Q5VXU3 224 aa11.58□□□□□ -0.56
NCKAP1-202ENST00000361354 ANP32CO43423 234 aa11.58□□□□□ -0.56
NCKAP1-202ENST00000361354 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
NCKAP1-202ENST00000361354 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
NCKAP1-202ENST00000361354 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
NCKAP1-202ENST00000361354 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
NCKAP1-202ENST00000361354 TRIM44Q96DX7 344 aaPredicted RBP11.45□□□□□ -0.58
NCKAP1-202ENST00000361354 NBR1Q14596 966 aa11.4□□□□□ -0.58
NCKAP1-202ENST00000361354 ARXQ96QS3 562 aa11.4□□□□□ -0.58
NCKAP1-202ENST00000361354 ANP32EQ9BTT0 268 aa11.36□□□□□ -0.59
NCKAP1-202ENST00000361354 ACIN1Q9UKV3 1341 aaKnown RBP11.33□□□□□ -0.6
NCKAP1-202ENST00000361354 TRIM52Q96A61 297 aa11.33□□□□□ -0.6
NCKAP1-202ENST00000361354 FAM50AQ14320 339 aaKnown RBP11.32□□□□□ -0.6
NCKAP1-202ENST00000361354 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
NCKAP1-202ENST00000361354 NCLP19338 710 aaKnown RBP11.31□□□□□ -0.6
NCKAP1-202ENST00000361354 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
NCKAP1-202ENST00000361354 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
NCKAP1-202ENST00000361354 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.28□□□□□ -0.6
NCKAP1-202ENST00000361354 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.61
NCKAP1-202ENST00000361354 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
NCKAP1-202ENST00000361354 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
NCKAP1-202ENST00000361354 BECN1Q14457 450 aa11.26□□□□□ -0.61
NCKAP1-202ENST00000361354 ZRSR1Q15695 479 aaKnown RBP11.25□□□□□ -0.61
NCKAP1-202ENST00000361354 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
NCKAP1-202ENST00000361354 NAP1L5Q96NT1 182 aaPredicted RBP11.23□□□□□ -0.61
NCKAP1-202ENST00000361354 FKBP8Q14318 412 aa11.22□□□□□ -0.61
NCKAP1-202ENST00000361354 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
NCKAP1-202ENST00000361354 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
NCKAP1-202ENST00000361354 GOLGA6L6A8MZA4 724 aa11.2□□□□□ -0.62
NCKAP1-202ENST00000361354 CHAF1AQ13111 956 aaPredicted RBP11.17□□□□□ -0.62
NCKAP1-202ENST00000361354 NRDCO43847 1150 aa11.17□□□□□ -0.62
NCKAP1-202ENST00000361354 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
NCKAP1-202ENST00000361354 HNRNPUQ00839 825 aaKnown RBP eCLIP11.1□□□□□ -0.63
NCKAP1-202ENST00000361354 LOC105371045A0A1W2PR82 267 aa11.1□□□□□ -0.63
NCKAP1-202ENST00000361354 L1TD1Q5T7N2 865 aaKnown RBP11.09□□□□□ -0.63
NCKAP1-202ENST00000361354 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
NCKAP1-202ENST00000361354 CALRP27797 417 aaKnown RBP11.05□□□□□ -0.64
NCKAP1-202ENST00000361354 TNNT3P45378 269 aaPredicted RBP11.05□□□□□ -0.64
NCKAP1-202ENST00000361354 PPM1GO15355 546 aaPredicted RBP11.03□□□□□ -0.64
NCKAP1-202ENST00000361354 TONSLQ96HA7 1378 aa11.02□□□□□ -0.64
NCKAP1-202ENST00000361354 MSNP26038 577 aaKnown RBP11.02□□□□□ -0.64
NCKAP1-202ENST00000361354 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
NCKAP1-202ENST00000361354 FAM9BQ8IZU0 186 aa11□□□□□ -0.65
NCKAP1-202ENST00000361354 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
NCKAP1-202ENST00000361354 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
NCKAP1-202ENST00000361354 PLCB2Q00722 1185 aa10.96□□□□□ -0.65
NCKAP1-202ENST00000361354 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.66
NCKAP1-202ENST00000361354 NOC3LQ8WTT2 800 aaKnown RBP10.96□□□□□ -0.66
NCKAP1-202ENST00000361354 KIAA2012Q0VF49 1180 aa10.95□□□□□ -0.66
NCKAP1-202ENST00000361354 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
NCKAP1-202ENST00000361354 USP35Q9P2H5 1018 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms