RNA–Protein interactions for RNA: ENST00000264331.8

TOP2B-201, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TOP2B, Length 5,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-201ENST00000264331 NISCHQ9Y2I1 1504 aa13.65□□□□□ -0.22
TOP2B-201ENST00000264331 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
TOP2B-201ENST00000264331 MYO15BQ96JP2 1530 aa11.79□□□□□ -0.52
TOP2B-201ENST00000264331 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
TOP2B-201ENST00000264331 DCAF8L2P0C7V8 631 aa11.68□□□□□ -0.54
TOP2B-201ENST00000264331 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
TOP2B-201ENST00000264331 LOC105371045A0A1W2PR82 267 aa11.42□□□□□ -0.58
TOP2B-201ENST00000264331 CHIC1Q5VXU3 224 aa11.29□□□□□ -0.6
TOP2B-201ENST00000264331 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
TOP2B-201ENST00000264331 PPARGC1BQ86YN6 1023 aaKnown RBP11.24□□□□□ -0.61
TOP2B-201ENST00000264331 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
TOP2B-201ENST00000264331 ABCC9O60706 1549 aa11.21□□□□□ -0.62
TOP2B-201ENST00000264331 SCRIBQ14160 1630 aa11.14□□□□□ -0.63
TOP2B-201ENST00000264331 CCDC180Q9P1Z9 1646 aa11.14□□□□□ -0.63
TOP2B-201ENST00000264331 GOLGB1Q14789 3259 aaKnown RBP11.12□□□□□ -0.63
TOP2B-201ENST00000264331 SRCAPQ6ZRS2 3230 aa11.07□□□□□ -0.64
TOP2B-201ENST00000264331 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
TOP2B-201ENST00000264331 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
TOP2B-201ENST00000264331 MROH2BQ7Z745 1585 aa10.98□□□□□ -0.65
TOP2B-201ENST00000264331 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
TOP2B-201ENST00000264331 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
TOP2B-201ENST00000264331 WIZO95785 1651 aa10.95□□□□□ -0.66
TOP2B-201ENST00000264331 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
TOP2B-201ENST00000264331 UTRNP46939 3433 aa10.93□□□□□ -0.66
TOP2B-201ENST00000264331 UNC13AQ9UPW8 1703 aa10.91□□□□□ -0.66
TOP2B-201ENST00000264331 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
TOP2B-201ENST00000264331 RUSC2Q8N2Y8 1516 aa10.86□□□□□ -0.67
TOP2B-201ENST00000264331 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
TOP2B-201ENST00000264331 TTBK1Q5TCY1 1321 aaPredicted RBP10.74□□□□□ -0.69
TOP2B-201ENST00000264331 BICRAQ9NZM4 1560 aa10.72□□□□□ -0.69
TOP2B-201ENST00000264331 PCNTO95613 3336 aa10.71□□□□□ -0.69
TOP2B-201ENST00000264331 DCAF1Q9Y4B6 1507 aa10.71□□□□□ -0.7
TOP2B-201ENST00000264331 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
TOP2B-201ENST00000264331 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
TOP2B-201ENST00000264331 SOGA1O94964 1423 aa10.64□□□□□ -0.71
TOP2B-201ENST00000264331 NACADO15069 1562 aa10.57□□□□□ -0.72
TOP2B-201ENST00000264331 HRCP23327 699 aa10.52□□□□□ -0.72
TOP2B-201ENST00000264331 TRIM41Q8WV44 630 aa10.46□□□□□ -0.73
TOP2B-201ENST00000264331 SMARCA2P51531 1590 aa10.45□□□□□ -0.74
TOP2B-201ENST00000264331 RANGAP1P46060 587 aaPredicted RBP10.44□□□□□ -0.74
TOP2B-201ENST00000264331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.41□□□□□ -0.74
TOP2B-201ENST00000264331 SMARCA4P51532 1647 aa10.4□□□□□ -0.74
TOP2B-201ENST00000264331 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
TOP2B-201ENST00000264331 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
TOP2B-201ENST00000264331 CENPFP49454 3210 aa10.26□□□□□ -0.77
TOP2B-201ENST00000264331 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
TOP2B-201ENST00000264331 NESP48681 1621 aa10.23□□□□□ -0.77
TOP2B-201ENST00000264331 KANK4Q5T7N3 995 aaPredicted RBP10.22□□□□□ -0.77
TOP2B-201ENST00000264331 LAMA3Q16787 3333 aa10.22□□□□□ -0.77
TOP2B-201ENST00000264331 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
TOP2B-201ENST00000264331 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
TOP2B-201ENST00000264331 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
TOP2B-201ENST00000264331 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
TOP2B-201ENST00000264331 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
TOP2B-201ENST00000264331 KCNH8Q96L42 1107 aa10.11□□□□□ -0.79
TOP2B-201ENST00000264331 CUX1P39880 1505 aa10.11□□□□□ -0.79
TOP2B-201ENST00000264331 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
TOP2B-201ENST00000264331 ARAP1Q96P48 1450 aa10.07□□□□□ -0.8
TOP2B-201ENST00000264331 LAMA2P24043 3122 aaKnown RBP10.04□□□□□ -0.8
TOP2B-201ENST00000264331 PEG3Q9GZU2 1588 aa10.04□□□□□ -0.8
TOP2B-201ENST00000264331 HNRNPUL2Q1KMD3 747 aaKnown RBP10.03□□□□□ -0.8
TOP2B-201ENST00000264331 BRCA2P51587 3418 aa10.03□□□□□ -0.8
TOP2B-201ENST00000264331 WRNQ14191 1432 aaPredicted RBP eCLIP10.03□□□□□ -0.8
TOP2B-201ENST00000264331 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
TOP2B-201ENST00000264331 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
TOP2B-201ENST00000264331 RAD54L2Q9Y4B4 1467 aa10.01□□□□□ -0.81
TOP2B-201ENST00000264331 CLIP1P30622 1438 aa9.99□□□□□ -0.81
TOP2B-201ENST00000264331 EP400Q96L91 3159 aa9.99□□□□□ -0.81
TOP2B-201ENST00000264331 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
TOP2B-201ENST00000264331 LRRIQ1Q96JM4 1722 aa9.97□□□□□ -0.81
TOP2B-201ENST00000264331 NEUROD1Q13562 356 aa9.97□□□□□ -0.81
TOP2B-201ENST00000264331 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.81
TOP2B-201ENST00000264331 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
TOP2B-201ENST00000264331 KIF21BO75037 1637 aa9.95□□□□□ -0.82
TOP2B-201ENST00000264331 CC2D2AQ9P2K1 1620 aa9.92□□□□□ -0.82
TOP2B-201ENST00000264331 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
TOP2B-201ENST00000264331 CEP350Q5VT06 3117 aa9.89□□□□□ -0.83
TOP2B-201ENST00000264331 PRXQ9BXM0 1461 aa9.87□□□□□ -0.83
TOP2B-201ENST00000264331 TOP2BQ02880 1626 aa9.87□□□□□ -0.83
TOP2B-201ENST00000264331 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
TOP2B-201ENST00000264331 IGF1RP08069 1367 aa9.87□□□□□ -0.83
TOP2B-201ENST00000264331 PTPRKQ15262 1439 aa9.86□□□□□ -0.83
TOP2B-201ENST00000264331 ITGAEP38570 1179 aa9.85□□□□□ -0.83
TOP2B-201ENST00000264331 SENP3-EIF4A1A0A087X0R7 540 aa9.84□□□□□ -0.83
TOP2B-201ENST00000264331 TNIKQ9UKE5 1360 aa9.84□□□□□ -0.83
TOP2B-201ENST00000264331 AQRO60306 1485 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■■■■□ 19.4
TOP2B-201ENST00000264331 MIER1Q8N108 512 aa9.84□□□□□ -0.83
TOP2B-201ENST00000264331 TDRD9Q8NDG6 1382 aaKnown RBP9.84□□□□□ -0.83
TOP2B-201ENST00000264331 CFTRP13569 1480 aa9.83□□□□□ -0.84
TOP2B-201ENST00000264331 DENND4BO75064 1496 aaPredicted RBP9.83□□□□□ -0.84
TOP2B-201ENST00000264331 NCAPD3P42695 1498 aa9.82□□□□□ -0.84
TOP2B-201ENST00000264331 MAGI3Q5TCQ9 1506 aa9.81□□□□□ -0.84
TOP2B-201ENST00000264331 SIN3AQ96ST3 1273 aa9.81□□□□□ -0.84
TOP2B-201ENST00000264331 KDM6BO15054 1643 aa9.81□□□□□ -0.84
TOP2B-201ENST00000264331 PHLDB1Q86UU1 1377 aa9.81□□□□□ -0.84
TOP2B-201ENST00000264331 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
TOP2B-201ENST00000264331 BIVM-ERCC5R4GMW8 1640 aa9.8□□□□□ -0.84
TOP2B-201ENST00000264331 FGD5Q6ZNL6 1462 aa9.79□□□□□ -0.84
TOP2B-201ENST00000264331 VCANP13611 3396 aa9.79□□□□□ -0.84
TOP2B-201ENST00000264331 ZNF608Q9ULD9 1512 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms