RNA–Protein interactions for RNA: ENST00000305921.7

PPM1D-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1D, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-201ENST00000305921 DCAF8L2P0C7V8 631 aa28.91■■■□□ 2.22
PPM1D-201ENST00000305921 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
PPM1D-201ENST00000305921 SUPT5HO00267 1087 aaKnown RBP27.54■■■□□ 2
PPM1D-201ENST00000305921 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
PPM1D-201ENST00000305921 EHMT2Q96KQ7 1210 aa26.34■■□□□ 1.81
PPM1D-201ENST00000305921 APLP2Q06481 763 aa25.95■■□□□ 1.74
PPM1D-201ENST00000305921 FAM9AQ8IZU1 332 aaPredicted RBP25.9■■□□□ 1.74
PPM1D-201ENST00000305921 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
PPM1D-201ENST00000305921 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
PPM1D-201ENST00000305921 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.66
PPM1D-201ENST00000305921 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
PPM1D-201ENST00000305921 RANGAP1P46060 587 aaPredicted RBP25.27■■□□□ 1.64
PPM1D-201ENST00000305921 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
PPM1D-201ENST00000305921 ZEB1P37275 1124 aaPredicted RBP25.14■■□□□ 1.61
PPM1D-201ENST00000305921 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
PPM1D-201ENST00000305921 ATP1B4Q9UN42 357 aaPredicted RBP25.02■■□□□ 1.6
PPM1D-201ENST00000305921 CENPBP07199 599 aaPredicted RBP24.8■■□□□ 1.56
PPM1D-201ENST00000305921 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
PPM1D-201ENST00000305921 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
PPM1D-201ENST00000305921 TRIM26Q12899 539 aaPredicted RBP24.63■■□□□ 1.53
PPM1D-201ENST00000305921 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
PPM1D-201ENST00000305921 ABCC9O60706 1549 aa24.36■■□□□ 1.49
PPM1D-201ENST00000305921 HRCP23327 699 aa24.29■■□□□ 1.48
PPM1D-201ENST00000305921 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
PPM1D-201ENST00000305921 ITGAEP38570 1179 aa24.25■■□□□ 1.47
PPM1D-201ENST00000305921 NEFLP07196 543 aa24.23■■□□□ 1.47
PPM1D-201ENST00000305921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.21■■□□□ 1.47
PPM1D-201ENST00000305921 HNRNPUL2Q1KMD3 747 aaKnown RBP24.21■■□□□ 1.47
PPM1D-201ENST00000305921 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
PPM1D-201ENST00000305921 ERICH6Q7L0X2 663 aa24.17■■□□□ 1.46
PPM1D-201ENST00000305921 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
PPM1D-201ENST00000305921 POLR3GLQ9BT43 218 aa23.83■■□□□ 1.41
PPM1D-201ENST00000305921 FAM50AQ14320 339 aaKnown RBP23.72■■□□□ 1.39
PPM1D-201ENST00000305921 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
PPM1D-201ENST00000305921 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
PPM1D-201ENST00000305921 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
PPM1D-201ENST00000305921 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
PPM1D-201ENST00000305921 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
PPM1D-201ENST00000305921 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
PPM1D-201ENST00000305921 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
PPM1D-201ENST00000305921 FBLN2P98095 1184 aa23.4■■□□□ 1.34
PPM1D-201ENST00000305921 MYT1Q01538 1121 aa23.38■■□□□ 1.33
PPM1D-201ENST00000305921 DAXXQ9UER7 740 aaPredicted RBP23.34■■□□□ 1.33
PPM1D-201ENST00000305921 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
PPM1D-201ENST00000305921 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
PPM1D-201ENST00000305921 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
PPM1D-201ENST00000305921 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
PPM1D-201ENST00000305921 ZNF316A6NFI3 1004 aaPredicted RBP23.18■■□□□ 1.3
PPM1D-201ENST00000305921 ANP32CO43423 234 aa23.16■■□□□ 1.3
PPM1D-201ENST00000305921 ARID3CA6NKF2 412 aa23.13■■□□□ 1.29
PPM1D-201ENST00000305921 CDK11AQ9UQ88 783 aaPredicted RBP23.09■■□□□ 1.29
PPM1D-201ENST00000305921 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
PPM1D-201ENST00000305921 CLSPNQ9HAW4 1339 aa23■■□□□ 1.27
PPM1D-201ENST00000305921 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
PPM1D-201ENST00000305921 GTF3C3Q9Y5Q9 886 aa22.95■■□□□ 1.26
PPM1D-201ENST00000305921 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
PPM1D-201ENST00000305921 BCANQ96GW7 911 aa22.87■■□□□ 1.25
PPM1D-201ENST00000305921 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
PPM1D-201ENST00000305921 TONSLQ96HA7 1378 aa22.8■■□□□ 1.24
PPM1D-201ENST00000305921 RTL5Q5HYW3 569 aaPredicted RBP22.8■■□□□ 1.24
PPM1D-201ENST00000305921 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
PPM1D-201ENST00000305921 NACADO15069 1562 aa22.73■■□□□ 1.23
PPM1D-201ENST00000305921 CLIP1P30622 1438 aa22.72■■□□□ 1.23
PPM1D-201ENST00000305921 EEA1Q15075 1411 aa22.7■■□□□ 1.22
PPM1D-201ENST00000305921 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
PPM1D-201ENST00000305921 NEFMP07197 916 aa22.64■■□□□ 1.21
PPM1D-201ENST00000305921 CHIC2Q9UKJ5 165 aa22.63■■□□□ 1.21
PPM1D-201ENST00000305921 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
PPM1D-201ENST00000305921 ZBTB47Q9UFB7 747 aaPredicted RBP22.61■■□□□ 1.21
PPM1D-201ENST00000305921 CANXP27824 592 aaKnown RBP22.6■■□□□ 1.21
PPM1D-201ENST00000305921 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
PPM1D-201ENST00000305921 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
PPM1D-201ENST00000305921 GOLGA3Q08378 1498 aa22.57■■□□□ 1.2
PPM1D-201ENST00000305921 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
PPM1D-201ENST00000305921 TSPY4P0CV99 314 aa22.56■■□□□ 1.2
PPM1D-201ENST00000305921 TSPY10P0CW01 314 aa22.56■■□□□ 1.2
PPM1D-201ENST00000305921 ESF1Q9H501 851 aaKnown RBP22.55■■□□□ 1.2
PPM1D-201ENST00000305921 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
PPM1D-201ENST00000305921 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
PPM1D-201ENST00000305921 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
PPM1D-201ENST00000305921 CHGAP10645 457 aaKnown RBP22.53■■□□□ 1.2
PPM1D-201ENST00000305921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.46■■□□□ 1.197e-6■□□□□ 10.8
PPM1D-201ENST00000305921 HNRNPUQ00839 825 aaKnown RBP eCLIP22.46■■□□□ 1.19
PPM1D-201ENST00000305921 STAG3Q9UJ98 1225 aa22.45■■□□□ 1.18
PPM1D-201ENST00000305921 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
PPM1D-201ENST00000305921 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
PPM1D-201ENST00000305921 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
PPM1D-201ENST00000305921 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
PPM1D-201ENST00000305921 FAM9BQ8IZU0 186 aa22.39■■□□□ 1.18
PPM1D-201ENST00000305921 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
PPM1D-201ENST00000305921 FKBP8Q14318 412 aa22.37■■□□□ 1.17
PPM1D-201ENST00000305921 CECR2Q9BXF3 1484 aa22.35■■□□□ 1.17
PPM1D-201ENST00000305921 RRP7BPQ9NSQ0 103 aa22.34■■□□□ 1.17
PPM1D-201ENST00000305921 BCL11AQ9H165 835 aa22.34■■□□□ 1.17
PPM1D-201ENST00000305921 TMC1Q8TDI8 760 aa22.33■■□□□ 1.17
PPM1D-201ENST00000305921 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.16
PPM1D-201ENST00000305921 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
PPM1D-201ENST00000305921 ANP32AP39687 249 aaKnown RBP22.31■■□□□ 1.16
PPM1D-201ENST00000305921 EIF4G2P78344 907 aaKnown RBP eCLIP22.27■■□□□ 1.16
PPM1D-201ENST00000305921 MRS2Q9HD23 443 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 453.2 ms