RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
TSPAN6-201ENST00000373020 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
TSPAN6-201ENST00000373020 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
TSPAN6-201ENST00000373020 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
TSPAN6-201ENST00000373020 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
TSPAN6-201ENST00000373020 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
TSPAN6-201ENST00000373020 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
TSPAN6-201ENST00000373020 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
TSPAN6-201ENST00000373020 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
TSPAN6-201ENST00000373020 ABCC9O60706 1549 aa21.3■■□□□ 1
TSPAN6-201ENST00000373020 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
TSPAN6-201ENST00000373020 NACADO15069 1562 aa21.07■□□□□ 0.96
TSPAN6-201ENST00000373020 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
TSPAN6-201ENST00000373020 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
TSPAN6-201ENST00000373020 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
TSPAN6-201ENST00000373020 MROH2BQ7Z745 1585 aa20.64■□□□□ 0.9
TSPAN6-201ENST00000373020 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
TSPAN6-201ENST00000373020 WIZO95785 1651 aa20.52■□□□□ 0.88
TSPAN6-201ENST00000373020 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
TSPAN6-201ENST00000373020 HRCP23327 699 aa20.49■□□□□ 0.87
TSPAN6-201ENST00000373020 UNC13AQ9UPW8 1703 aa20.42■□□□□ 0.86
TSPAN6-201ENST00000373020 PCGF6Q9BYE7 350 aa20.4■□□□□ 0.86
TSPAN6-201ENST00000373020 TRIM41Q8WV44 630 aa20.39■□□□□ 0.86
TSPAN6-201ENST00000373020 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.86
TSPAN6-201ENST00000373020 SMARCA4P51532 1647 aa20.33■□□□□ 0.85
TSPAN6-201ENST00000373020 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
TSPAN6-201ENST00000373020 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
TSPAN6-201ENST00000373020 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
TSPAN6-201ENST00000373020 BICRAQ9NZM4 1560 aa20.15■□□□□ 0.82
TSPAN6-201ENST00000373020 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
TSPAN6-201ENST00000373020 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
TSPAN6-201ENST00000373020 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
TSPAN6-201ENST00000373020 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
TSPAN6-201ENST00000373020 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
TSPAN6-201ENST00000373020 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
TSPAN6-201ENST00000373020 EEA1Q15075 1411 aa19.8■□□□□ 0.76
TSPAN6-201ENST00000373020 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
TSPAN6-201ENST00000373020 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
TSPAN6-201ENST00000373020 SOGA1O94964 1423 aa19.74■□□□□ 0.75
TSPAN6-201ENST00000373020 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
TSPAN6-201ENST00000373020 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
TSPAN6-201ENST00000373020 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
TSPAN6-201ENST00000373020 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
TSPAN6-201ENST00000373020 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
TSPAN6-201ENST00000373020 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
TSPAN6-201ENST00000373020 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
TSPAN6-201ENST00000373020 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
TSPAN6-201ENST00000373020 GOLGA3Q08378 1498 aa19.6■□□□□ 0.73
TSPAN6-201ENST00000373020 KIF21BO75037 1637 aa19.56■□□□□ 0.72
TSPAN6-201ENST00000373020 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
TSPAN6-201ENST00000373020 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
TSPAN6-201ENST00000373020 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
TSPAN6-201ENST00000373020 NCAPD3P42695 1498 aa19.45■□□□□ 0.7
TSPAN6-201ENST00000373020 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
TSPAN6-201ENST00000373020 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
TSPAN6-201ENST00000373020 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
TSPAN6-201ENST00000373020 CLIP1P30622 1438 aa19.3■□□□□ 0.68
TSPAN6-201ENST00000373020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
TSPAN6-201ENST00000373020 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
TSPAN6-201ENST00000373020 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
TSPAN6-201ENST00000373020 CFTRP13569 1480 aa19.26■□□□□ 0.67
TSPAN6-201ENST00000373020 CUX1P39880 1505 aa19.25■□□□□ 0.67
TSPAN6-201ENST00000373020 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
TSPAN6-201ENST00000373020 CCER1Q8TC90 406 aaPredicted RBP19.23■□□□□ 0.67
TSPAN6-201ENST00000373020 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
TSPAN6-201ENST00000373020 TTBK1Q5TCY1 1321 aaPredicted RBP19.17■□□□□ 0.66
TSPAN6-201ENST00000373020 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
TSPAN6-201ENST00000373020 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
TSPAN6-201ENST00000373020 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
TSPAN6-201ENST00000373020 APLP2Q06481 763 aa18.96■□□□□ 0.63
TSPAN6-201ENST00000373020 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
TSPAN6-201ENST00000373020 ARHGAP35Q9NRY4 1499 aa18.91■□□□□ 0.62
TSPAN6-201ENST00000373020 CUX2O14529 1486 aa18.9■□□□□ 0.62
TSPAN6-201ENST00000373020 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
TSPAN6-201ENST00000373020 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
TSPAN6-201ENST00000373020 IGF1RP08069 1367 aa18.87■□□□□ 0.61
TSPAN6-201ENST00000373020 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
TSPAN6-201ENST00000373020 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.61
TSPAN6-201ENST00000373020 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
TSPAN6-201ENST00000373020 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
TSPAN6-201ENST00000373020 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
TSPAN6-201ENST00000373020 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
TSPAN6-201ENST00000373020 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
TSPAN6-201ENST00000373020 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
TSPAN6-201ENST00000373020 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.59
TSPAN6-201ENST00000373020 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
TSPAN6-201ENST00000373020 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
TSPAN6-201ENST00000373020 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
TSPAN6-201ENST00000373020 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
TSPAN6-201ENST00000373020 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
TSPAN6-201ENST00000373020 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
TSPAN6-201ENST00000373020 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
TSPAN6-201ENST00000373020 CCNB3Q8WWL7 1395 aa18.67■□□□□ 0.58
TSPAN6-201ENST00000373020 CUL7Q14999 1698 aa18.67■□□□□ 0.58
TSPAN6-201ENST00000373020 CFAP43Q8NDM7 1665 aa18.67■□□□□ 0.58
TSPAN6-201ENST00000373020 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
TSPAN6-201ENST00000373020 WDR97A6NE52 1622 aa18.66■□□□□ 0.58
TSPAN6-201ENST00000373020 NESP48681 1621 aa18.65■□□□□ 0.58
TSPAN6-201ENST00000373020 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.58
TSPAN6-201ENST00000373020 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms