RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
SPTBN1-207ENST00000615901 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
SPTBN1-207ENST00000615901 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
SPTBN1-207ENST00000615901 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
SPTBN1-207ENST00000615901 APLP2Q06481 763 aa14.34□□□□□ -0.11
SPTBN1-207ENST00000615901 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
SPTBN1-207ENST00000615901 FAM9AQ8IZU1 332 aaPredicted RBP14.19□□□□□ -0.14
SPTBN1-207ENST00000615901 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
SPTBN1-207ENST00000615901 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
SPTBN1-207ENST00000615901 ZEB1P37275 1124 aaPredicted RBP13.98□□□□□ -0.17
SPTBN1-207ENST00000615901 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
SPTBN1-207ENST00000615901 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
SPTBN1-207ENST00000615901 TTBK1Q5TCY1 1321 aaPredicted RBP13.8□□□□□ -0.2
SPTBN1-207ENST00000615901 CCER1Q8TC90 406 aaPredicted RBP13.74□□□□□ -0.21
SPTBN1-207ENST00000615901 RANGAP1P46060 587 aaPredicted RBP13.73□□□□□ -0.21
SPTBN1-207ENST00000615901 CENPBP07199 599 aaPredicted RBP13.72□□□□□ -0.21
SPTBN1-207ENST00000615901 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.22
SPTBN1-207ENST00000615901 MYT1Q01538 1121 aa13.64□□□□□ -0.23
SPTBN1-207ENST00000615901 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
SPTBN1-207ENST00000615901 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
SPTBN1-207ENST00000615901 ABCC9O60706 1549 aa13.57□□□□□ -0.24
SPTBN1-207ENST00000615901 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
SPTBN1-207ENST00000615901 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
SPTBN1-207ENST00000615901 NEFLP07196 543 aa13.41□□□□□ -0.26
SPTBN1-207ENST00000615901 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
SPTBN1-207ENST00000615901 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
SPTBN1-207ENST00000615901 HRCP23327 699 aa13.34□□□□□ -0.27
SPTBN1-207ENST00000615901 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-207ENST00000615901 LOC105371045A0A1W2PR82 267 aa13.27□□□□□ -0.28
SPTBN1-207ENST00000615901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
SPTBN1-207ENST00000615901 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
SPTBN1-207ENST00000615901 YTHDC1Q96MU7 727 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-207ENST00000615901 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPTBN1-207ENST00000615901 ITGAEP38570 1179 aa13.19□□□□□ -0.3
SPTBN1-207ENST00000615901 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
SPTBN1-207ENST00000615901 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
SPTBN1-207ENST00000615901 NACADO15069 1562 aa13.07□□□□□ -0.32
SPTBN1-207ENST00000615901 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
SPTBN1-207ENST00000615901 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
SPTBN1-207ENST00000615901 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
SPTBN1-207ENST00000615901 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.34
SPTBN1-207ENST00000615901 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
SPTBN1-207ENST00000615901 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
SPTBN1-207ENST00000615901 TRIM52Q96A61 297 aa12.91□□□□□ -0.34
SPTBN1-207ENST00000615901 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-207ENST00000615901 EEA1Q15075 1411 aa12.82□□□□□ -0.36
SPTBN1-207ENST00000615901 FBLN2P98095 1184 aa12.8□□□□□ -0.36
SPTBN1-207ENST00000615901 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
SPTBN1-207ENST00000615901 BAZ1AQ9NRL2 1556 aaPredicted RBP12.78□□□□□ -0.36
SPTBN1-207ENST00000615901 ANP32CO43423 234 aa12.78□□□□□ -0.36
SPTBN1-207ENST00000615901 SLC4A1APQ9BWU0 796 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-207ENST00000615901 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-207ENST00000615901 RSF1Q96T23 1441 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-207ENST00000615901 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
SPTBN1-207ENST00000615901 GOLGA3Q08378 1498 aa12.71□□□□□ -0.38
SPTBN1-207ENST00000615901 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.38
SPTBN1-207ENST00000615901 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
SPTBN1-207ENST00000615901 CLIP1P30622 1438 aa12.7□□□□□ -0.38
SPTBN1-207ENST00000615901 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
SPTBN1-207ENST00000615901 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
SPTBN1-207ENST00000615901 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
SPTBN1-207ENST00000615901 WRNQ14191 1432 aaPredicted RBP eCLIP12.64□□□□□ -0.39
SPTBN1-207ENST00000615901 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
SPTBN1-207ENST00000615901 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
SPTBN1-207ENST00000615901 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
SPTBN1-207ENST00000615901 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-207ENST00000615901 ACIN1Q9UKV3 1341 aaKnown RBP12.59□□□□□ -0.39
SPTBN1-207ENST00000615901 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
SPTBN1-207ENST00000615901 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
SPTBN1-207ENST00000615901 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
SPTBN1-207ENST00000615901 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
SPTBN1-207ENST00000615901 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
SPTBN1-207ENST00000615901 NEFMP07197 916 aa12.54□□□□□ -0.4
SPTBN1-207ENST00000615901 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
SPTBN1-207ENST00000615901 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
SPTBN1-207ENST00000615901 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-207ENST00000615901 TNIKQ9UKE5 1360 aa12.51□□□□□ -0.41
SPTBN1-207ENST00000615901 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPTBN1-207ENST00000615901 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-207ENST00000615901 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
SPTBN1-207ENST00000615901 TOP2AP11388 1531 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-207ENST00000615901 BCANQ96GW7 911 aa12.45□□□□□ -0.42
SPTBN1-207ENST00000615901 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
SPTBN1-207ENST00000615901 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
SPTBN1-207ENST00000615901 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
SPTBN1-207ENST00000615901 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
SPTBN1-207ENST00000615901 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
SPTBN1-207ENST00000615901 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
SPTBN1-207ENST00000615901 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
SPTBN1-207ENST00000615901 ANP32AP39687 249 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-207ENST00000615901 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
SPTBN1-207ENST00000615901 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
SPTBN1-207ENST00000615901 WIZO95785 1651 aa12.35□□□□□ -0.43
SPTBN1-207ENST00000615901 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
SPTBN1-207ENST00000615901 CUX2O14529 1486 aa12.31□□□□□ -0.44
SPTBN1-207ENST00000615901 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
SPTBN1-207ENST00000615901 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
SPTBN1-207ENST00000615901 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-207ENST00000615901 HNRNPUQ00839 825 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPTBN1-207ENST00000615901 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms