RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
CHMP1B-201ENST00000526991 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
CHMP1B-201ENST00000526991 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
CHMP1B-201ENST00000526991 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
CHMP1B-201ENST00000526991 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
CHMP1B-201ENST00000526991 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
CHMP1B-201ENST00000526991 ABCC9O60706 1549 aa20.55■□□□□ 0.88
CHMP1B-201ENST00000526991 SCRIBQ14160 1630 aa20.23■□□□□ 0.83
CHMP1B-201ENST00000526991 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
CHMP1B-201ENST00000526991 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
CHMP1B-201ENST00000526991 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
CHMP1B-201ENST00000526991 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.76
CHMP1B-201ENST00000526991 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHMP1B-201ENST00000526991 NACADO15069 1562 aa19.74■□□□□ 0.75
CHMP1B-201ENST00000526991 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
CHMP1B-201ENST00000526991 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
CHMP1B-201ENST00000526991 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
CHMP1B-201ENST00000526991 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
CHMP1B-201ENST00000526991 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
CHMP1B-201ENST00000526991 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
CHMP1B-201ENST00000526991 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
CHMP1B-201ENST00000526991 HRCP23327 699 aa19.5■□□□□ 0.71
CHMP1B-201ENST00000526991 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
CHMP1B-201ENST00000526991 WIZO95785 1651 aa19.42■□□□□ 0.7
CHMP1B-201ENST00000526991 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
CHMP1B-201ENST00000526991 UNC13AQ9UPW8 1703 aa19.32■□□□□ 0.68
CHMP1B-201ENST00000526991 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
CHMP1B-201ENST00000526991 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
CHMP1B-201ENST00000526991 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
CHMP1B-201ENST00000526991 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
CHMP1B-201ENST00000526991 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
CHMP1B-201ENST00000526991 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
CHMP1B-201ENST00000526991 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
CHMP1B-201ENST00000526991 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
CHMP1B-201ENST00000526991 TTBK1Q5TCY1 1321 aaPredicted RBP18.88■□□□□ 0.61
CHMP1B-201ENST00000526991 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
CHMP1B-201ENST00000526991 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
CHMP1B-201ENST00000526991 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
CHMP1B-201ENST00000526991 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
CHMP1B-201ENST00000526991 SOGA1O94964 1423 aa18.72■□□□□ 0.59
CHMP1B-201ENST00000526991 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
CHMP1B-201ENST00000526991 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
CHMP1B-201ENST00000526991 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
CHMP1B-201ENST00000526991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
CHMP1B-201ENST00000526991 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
CHMP1B-201ENST00000526991 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
CHMP1B-201ENST00000526991 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
CHMP1B-201ENST00000526991 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
CHMP1B-201ENST00000526991 MYT1Q01538 1121 aa18.48■□□□□ 0.55
CHMP1B-201ENST00000526991 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
CHMP1B-201ENST00000526991 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
CHMP1B-201ENST00000526991 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.54
CHMP1B-201ENST00000526991 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
CHMP1B-201ENST00000526991 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
CHMP1B-201ENST00000526991 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
CHMP1B-201ENST00000526991 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
CHMP1B-201ENST00000526991 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
CHMP1B-201ENST00000526991 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.51
CHMP1B-201ENST00000526991 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
CHMP1B-201ENST00000526991 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
CHMP1B-201ENST00000526991 CUX1P39880 1505 aa18.17■□□□□ 0.5
CHMP1B-201ENST00000526991 NESP48681 1621 aa18.16■□□□□ 0.5
CHMP1B-201ENST00000526991 EEA1Q15075 1411 aa18.16■□□□□ 0.5
CHMP1B-201ENST00000526991 CFTRP13569 1480 aa18.14■□□□□ 0.49
CHMP1B-201ENST00000526991 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
CHMP1B-201ENST00000526991 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
CHMP1B-201ENST00000526991 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
CHMP1B-201ENST00000526991 CLIP1P30622 1438 aa18.1■□□□□ 0.49
CHMP1B-201ENST00000526991 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
CHMP1B-201ENST00000526991 PRKCSHP14314 528 aaPredicted RBP18.07■□□□□ 0.48
CHMP1B-201ENST00000526991 APLP2Q06481 763 aa18.05■□□□□ 0.48
CHMP1B-201ENST00000526991 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
CHMP1B-201ENST00000526991 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
CHMP1B-201ENST00000526991 CUX2O14529 1486 aa18.02■□□□□ 0.48
CHMP1B-201ENST00000526991 ATP1B4Q9UN42 357 aaPredicted RBP18■□□□□ 0.47
CHMP1B-201ENST00000526991 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
CHMP1B-201ENST00000526991 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
CHMP1B-201ENST00000526991 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
CHMP1B-201ENST00000526991 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
CHMP1B-201ENST00000526991 FGD5Q6ZNL6 1462 aa17.96■□□□□ 0.47
CHMP1B-201ENST00000526991 KIF21BO75037 1637 aa17.95■□□□□ 0.46
CHMP1B-201ENST00000526991 NEUROD1Q13562 356 aa17.92■□□□□ 0.46
CHMP1B-201ENST00000526991 ITGAEP38570 1179 aa17.9■□□□□ 0.46
CHMP1B-201ENST00000526991 KANK4Q5T7N3 995 aaPredicted RBP17.9■□□□□ 0.46
CHMP1B-201ENST00000526991 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
CHMP1B-201ENST00000526991 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
CHMP1B-201ENST00000526991 IGF1RP08069 1367 aa17.88■□□□□ 0.45
CHMP1B-201ENST00000526991 VPS8Q8N3P4 1428 aa17.86■□□□□ 0.45
CHMP1B-201ENST00000526991 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
CHMP1B-201ENST00000526991 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
CHMP1B-201ENST00000526991 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.45
CHMP1B-201ENST00000526991 ACIN1Q9UKV3 1341 aaKnown RBP17.83■□□□□ 0.44
CHMP1B-201ENST00000526991 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
CHMP1B-201ENST00000526991 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
CHMP1B-201ENST00000526991 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
CHMP1B-201ENST00000526991 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
CHMP1B-201ENST00000526991 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
CHMP1B-201ENST00000526991 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
CHMP1B-201ENST00000526991 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
CHMP1B-201ENST00000526991 CENPBP07199 599 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms