Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC34.52■■■■□ 3.12
PPARGC1BQ86YN6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
PPARGC1BQ86YN6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
PPARGC1BQ86YN6 WWC2-AS2-201ENST00000578387 2183 ntBASIC34.52■■■■□ 3.12
PPARGC1BQ86YN6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
PPARGC1BQ86YN6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
PPARGC1BQ86YN6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
PPARGC1BQ86YN6 AC110285.6-201ENST00000617652 491 ntBASIC34.51■■■■□ 3.12
PPARGC1BQ86YN6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
PPARGC1BQ86YN6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC34.51■■■■□ 3.11
PPARGC1BQ86YN6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC34.51■■■■□ 3.11
PPARGC1BQ86YN6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC34.5■■■■□ 3.11
PPARGC1BQ86YN6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
PPARGC1BQ86YN6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
PPARGC1BQ86YN6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC34.5■■■■□ 3.11
PPARGC1BQ86YN6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
PPARGC1BQ86YN6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC34.49■■■■□ 3.11
PPARGC1BQ86YN6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
PPARGC1BQ86YN6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PPARGC1BQ86YN6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PPARGC1BQ86YN6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 AC241377.3-202ENST00000626088 1088 ntBASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 AC241585.3-202ENST00000628937 1088 ntBASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 AC245100.8-202ENST00000629247 1058 ntBASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 SYT6-210ENST00000641643 1587 ntBASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
PPARGC1BQ86YN6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
PPARGC1BQ86YN6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 AC024257.2-201ENST00000549699 147 ntBASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 AC010525.1-201ENST00000585559 441 ntBASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
PPARGC1BQ86YN6 AC133637.1-201ENST00000624115 1537 ntBASIC34.45■■■■□ 3.11
PPARGC1BQ86YN6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
PPARGC1BQ86YN6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
PPARGC1BQ86YN6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
PPARGC1BQ86YN6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
PPARGC1BQ86YN6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 AL137060.1-201ENST00000618151 2648 ntBASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 AL499627.2-201ENST00000606283 725 ntBASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
PPARGC1BQ86YN6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 AL136162.1-201ENST00000607711 1078 ntBASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
PPARGC1BQ86YN6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
PPARGC1BQ86YN6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
PPARGC1BQ86YN6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
PPARGC1BQ86YN6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC34.41■■■■□ 3.1
PPARGC1BQ86YN6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC34.41■■■■□ 3.1
PPARGC1BQ86YN6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
PPARGC1BQ86YN6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
PPARGC1BQ86YN6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
PPARGC1BQ86YN6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
PPARGC1BQ86YN6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
PPARGC1BQ86YN6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 505.3 ms