RNA–Protein interactions for RNA: ENST00000555567.5

PGF-206, Transcript of placental growth factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PGF, Length 1,927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-206ENST00000555567 NISCHQ9Y2I1 1504 aa50.26■■■■■ 5.64
PGF-206ENST00000555567 CCDC180Q9P1Z9 1646 aa44.15■■■■■ 4.66
PGF-206ENST00000555567 ABCC9O60706 1549 aa42.53■■■■■ 4.4
PGF-206ENST00000555567 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
PGF-206ENST00000555567 DCAF8L2P0C7V8 631 aa41.93■■■■■ 4.3
PGF-206ENST00000555567 DCAF1Q9Y4B6 1507 aa41.53■■■■■ 4.24
PGF-206ENST00000555567 NACADO15069 1562 aa41.31■■■■■ 4.2
PGF-206ENST00000555567 MYO15BQ96JP2 1530 aa41.27■■■■■ 4.2
PGF-206ENST00000555567 RB1CC1Q8TDY2 1594 aa41.16■■■■■ 4.18
PGF-206ENST00000555567 SHROOM4Q9ULL8 1493 aa40.95■■■■■ 4.15
PGF-206ENST00000555567 SCRIBQ14160 1630 aa40.57■■■■■ 4.09
PGF-206ENST00000555567 UNC13AQ9UPW8 1703 aa40.32■■■■■ 4.05
PGF-206ENST00000555567 PABPN1Q86U42 306 aaKnown RBP eCLIP40■■■■□ 3.99
PGF-206ENST00000555567 BICRAQ9NZM4 1560 aa39.92■■■■□ 3.98
PGF-206ENST00000555567 SUPT5HO00267 1087 aaKnown RBP39.31■■■■□ 3.88
PGF-206ENST00000555567 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
PGF-206ENST00000555567 RSF1Q96T23 1441 aaPredicted RBP38.96■■■■□ 3.83
PGF-206ENST00000555567 MROH2BQ7Z745 1585 aa38.87■■■■□ 3.81
PGF-206ENST00000555567 BAZ1AQ9NRL2 1556 aaPredicted RBP38.86■■■■□ 3.81
PGF-206ENST00000555567 SMARCA4P51532 1647 aa38.8■■■■□ 3.8
PGF-206ENST00000555567 EIF4G1Q04637 1599 aaKnown RBP38.8■■■■□ 3.8
PGF-206ENST00000555567 WIZO95785 1651 aa38.54■■■■□ 3.76
PGF-206ENST00000555567 CC2D2AQ9P2K1 1620 aa38.44■■■■□ 3.74
PGF-206ENST00000555567 ATAD2BQ9ULI0 1458 aa38.35■■■■□ 3.73
PGF-206ENST00000555567 SMARCA2P51531 1590 aa38.3■■■■□ 3.72
PGF-206ENST00000555567 PEG3Q9GZU2 1588 aa38.3■■■■□ 3.72
PGF-206ENST00000555567 DNAJC5BQ9UF47 199 aa38.22■■■■□ 3.71
PGF-206ENST00000555567 NCAPD3P42695 1498 aa38.13■■■■□ 3.69
PGF-206ENST00000555567 BAZ1BQ9UIG0 1483 aaKnown RBP38.11■■■■□ 3.69
PGF-206ENST00000555567 TOP2AP11388 1531 aaKnown RBP38.09■■■■□ 3.69
PGF-206ENST00000555567 HMGXB3Q12766 1538 aa38■■■■□ 3.67
PGF-206ENST00000555567 CCDC88BA6NC98 1476 aa37.74■■■■□ 3.63
PGF-206ENST00000555567 CHIC1Q5VXU3 224 aa37.59■■■■□ 3.61
PGF-206ENST00000555567 CADPSQ9ULU8 1353 aa37.13■■■■□ 3.53
PGF-206ENST00000555567 NESP48681 1621 aa37.09■■■■□ 3.53
PGF-206ENST00000555567 CFTRP13569 1480 aa37.08■■■■□ 3.53
PGF-206ENST00000555567 LAMC3Q9Y6N6 1575 aa36.97■■■■□ 3.51
PGF-206ENST00000555567 TRIM41Q8WV44 630 aa36.93■■■■□ 3.5
PGF-206ENST00000555567 ABCC8Q09428 1581 aa36.91■■■■□ 3.5
PGF-206ENST00000555567 PRDM2Q13029 1718 aa36.84■■■■□ 3.49
PGF-206ENST00000555567 PDS5BQ9NTI5 1447 aa36.73■■■■□ 3.47
PGF-206ENST00000555567 FANCD2Q9BXW9 1451 aa36.73■■■■□ 3.47
PGF-206ENST00000555567 WRNQ14191 1432 aaPredicted RBP eCLIP36.64■■■■□ 3.46
PGF-206ENST00000555567 KIF21AQ7Z4S6 1674 aa36.63■■■■□ 3.45
PGF-206ENST00000555567 CEP164Q9UPV0 1460 aa36.57■■■■□ 3.45
PGF-206ENST00000555567 ERCC6Q03468 1493 aa36.55■■■■□ 3.44
PGF-206ENST00000555567 SYNJ1O43426 1573 aa36.54■■■■□ 3.44
PGF-206ENST00000555567 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
PGF-206ENST00000555567 CUX1P39880 1505 aa36.34■■■■□ 3.41
PGF-206ENST00000555567 BIVM-ERCC5R4GMW8 1640 aa36.34■■■■□ 3.41
PGF-206ENST00000555567 URB2Q14146 1524 aaKnown RBP36.31■■■■□ 3.4
PGF-206ENST00000555567 FAM9AQ8IZU1 332 aaPredicted RBP36.3■■■■□ 3.4
PGF-206ENST00000555567 MRC2Q9UBG0 1479 aa36.29■■■■□ 3.4
PGF-206ENST00000555567 TOPBP1Q92547 1522 aa36.24■■■■□ 3.39
PGF-206ENST00000555567 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
PGF-206ENST00000555567 SOGA1O94964 1423 aa36.2■■■■□ 3.39
PGF-206ENST00000555567 THOC2Q8NI27 1593 aaKnown RBP36.18■■■■□ 3.38
PGF-206ENST00000555567 LOC105371045A0A1W2PR82 267 aa36.18■■■■□ 3.38
PGF-206ENST00000555567 WDR62O43379 1518 aa36.11■■■■□ 3.37
PGF-206ENST00000555567 RUSC2Q8N2Y8 1516 aa36.11■■■■□ 3.37
PGF-206ENST00000555567 FGD5Q6ZNL6 1462 aa36.08■■■■□ 3.37
PGF-206ENST00000555567 POLA1P09884 1462 aaPredicted RBP36.01■■■■□ 3.35
PGF-206ENST00000555567 EEA1Q15075 1411 aa35.99■■■■□ 3.35
PGF-206ENST00000555567 RAD54L2Q9Y4B4 1467 aa35.91■■■■□ 3.34
PGF-206ENST00000555567 CSRNP3Q8WYN3 585 aa35.87■■■■□ 3.33
PGF-206ENST00000555567 CUX2O14529 1486 aa35.85■■■■□ 3.33
PGF-206ENST00000555567 EHMT2Q96KQ7 1210 aa35.82■■■■□ 3.32
PGF-206ENST00000555567 TARBP1Q13395 1621 aaKnown RBP35.75■■■■□ 3.31
PGF-206ENST00000555567 IFT140Q96RY7 1462 aa35.73■■■■□ 3.31
PGF-206ENST00000555567 ABCA10Q8WWZ4 1543 aa35.7■■■■□ 3.31
PGF-206ENST00000555567 KIF27Q86VH2 1401 aa35.7■■■■□ 3.31
PGF-206ENST00000555567 TDRD9Q8NDG6 1382 aaKnown RBP35.66■■■■□ 3.3
PGF-206ENST00000555567 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
PGF-206ENST00000555567 ZNF608Q9ULD9 1512 aaPredicted RBP35.6■■■■□ 3.29
PGF-206ENST00000555567 KIF21BO75037 1637 aa35.58■■■■□ 3.29
PGF-206ENST00000555567 AQRO60306 1485 aaKnown RBP eCLIP35.55■■■■□ 3.286e-7■■■■□ 24.6
PGF-206ENST00000555567 GOLGA3Q08378 1498 aa35.52■■■■□ 3.28
PGF-206ENST00000555567 GAPVD1Q14C86 1478 aa35.49■■■■□ 3.27
PGF-206ENST00000555567 ABCA5Q8WWZ7 1642 aa35.48■■■■□ 3.27
PGF-206ENST00000555567 PRXQ9BXM0 1461 aa35.47■■■■□ 3.27
PGF-206ENST00000555567 IGF1RP08069 1367 aa35.47■■■■□ 3.27
PGF-206ENST00000555567 RAPGEF2Q9Y4G8 1499 aa35.45■■■■□ 3.27
PGF-206ENST00000555567 EIF4G3O43432 1585 aaKnown RBP35.44■■■■□ 3.26
PGF-206ENST00000555567 TNIKQ9UKE5 1360 aa35.41■■■■□ 3.26
PGF-206ENST00000555567 UBTFP17480 764 aaKnown RBP35.38■■■■□ 3.25
PGF-206ENST00000555567 ERICH3Q5RHP9 1530 aa35.35■■■■□ 3.25
PGF-206ENST00000555567 PBRM1Q86U86 1689 aa35.33■■■■□ 3.25
PGF-206ENST00000555567 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
PGF-206ENST00000555567 CARMIL1Q5VZK9 1371 aa35.25■■■■□ 3.23
PGF-206ENST00000555567 CEP162Q5TB80 1403 aa35.21■■■■□ 3.23
PGF-206ENST00000555567 SNAPC4Q5SXM2 1469 aa35.18■■■■□ 3.22
PGF-206ENST00000555567 CUL7Q14999 1698 aa35.14■■■■□ 3.22
PGF-206ENST00000555567 MAGI1Q96QZ7 1491 aaPredicted RBP35.08■■■■□ 3.21
PGF-206ENST00000555567 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
PGF-206ENST00000555567 FHAD1B1AJZ9 1412 aa35.07■■■■□ 3.2
PGF-206ENST00000555567 FBLN2P98095 1184 aa35.05■■■■□ 3.2
PGF-206ENST00000555567 PCGF6Q9BYE7 350 aa35.01■■■■□ 3.2
PGF-206ENST00000555567 CHMP7Q8WUX9 453 aaPredicted RBP35■■■■□ 3.19
PGF-206ENST00000555567 CLIP1P30622 1438 aa34.96■■■■□ 3.19
PGF-206ENST00000555567 SYNJ2O15056 1496 aa34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms