RNA–Protein interactions for RNA: ENST00000336032.3

PNRC1-201, Transcript of proline rich nuclear receptor coactivator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNRC1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNRC1-201ENST00000336032 NISCHQ9Y2I1 1504 aa49.35■■■■■ 5.49
PNRC1-201ENST00000336032 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
PNRC1-201ENST00000336032 ZCCHC6Q5VYS8 1495 aaKnown RBP41.49■■■■■ 4.23
PNRC1-201ENST00000336032 DCAF8L2P0C7V8 631 aa40.78■■■■■ 4.12
PNRC1-201ENST00000336032 DCAF1Q9Y4B6 1507 aa40.75■■■■■ 4.11
PNRC1-201ENST00000336032 SHROOM4Q9ULL8 1493 aa40.49■■■■■ 4.07
PNRC1-201ENST00000336032 ABCC9O60706 1549 aa40.45■■■■■ 4.07
PNRC1-201ENST00000336032 MYO15BQ96JP2 1530 aa40.18■■■■■ 4.02
PNRC1-201ENST00000336032 NACADO15069 1562 aa39.9■■■■□ 3.98
PNRC1-201ENST00000336032 SCRIBQ14160 1630 aa39.54■■■■□ 3.92
PNRC1-201ENST00000336032 RB1CC1Q8TDY2 1594 aa39.51■■■■□ 3.92
PNRC1-201ENST00000336032 SUPT5HO00267 1087 aaKnown RBP39.06■■■■□ 3.84
PNRC1-201ENST00000336032 UNC13AQ9UPW8 1703 aa38.79■■■■□ 3.8
PNRC1-201ENST00000336032 RSF1Q96T23 1441 aaPredicted RBP38.39■■■■□ 3.74
PNRC1-201ENST00000336032 CECR2Q9BXF3 1484 aa38.38■■■■□ 3.73
PNRC1-201ENST00000336032 BICRAQ9NZM4 1560 aa38.37■■■■□ 3.73
PNRC1-201ENST00000336032 PABPN1Q86U42 306 aaKnown RBP eCLIP38.23■■■■□ 3.71
PNRC1-201ENST00000336032 MROH2BQ7Z745 1585 aa38.16■■■■□ 3.7
PNRC1-201ENST00000336032 BAZ1AQ9NRL2 1556 aaPredicted RBP38.07■■■■□ 3.69
PNRC1-201ENST00000336032 SMARCA4P51532 1647 aa37.89■■■■□ 3.66
PNRC1-201ENST00000336032 WIZO95785 1651 aa37.87■■■■□ 3.65
PNRC1-201ENST00000336032 CHIC1Q5VXU3 224 aa37.48■■■■□ 3.59
PNRC1-201ENST00000336032 TOP2AP11388 1531 aaKnown RBP37.44■■■■□ 3.58
PNRC1-201ENST00000336032 PEG3Q9GZU2 1588 aa37.4■■■■□ 3.58
PNRC1-201ENST00000336032 ATAD2BQ9ULI0 1458 aa37.22■■■■□ 3.55
PNRC1-201ENST00000336032 EIF4G1Q04637 1599 aaKnown RBP37.19■■■■□ 3.54
PNRC1-201ENST00000336032 SMARCA2P51531 1590 aa37.18■■■■□ 3.54
PNRC1-201ENST00000336032 CCDC88BA6NC98 1476 aa37.09■■■■□ 3.53
PNRC1-201ENST00000336032 BAZ1BQ9UIG0 1483 aaKnown RBP37.02■■■■□ 3.52
PNRC1-201ENST00000336032 NCAPD3P42695 1498 aa36.85■■■■□ 3.49
PNRC1-201ENST00000336032 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
PNRC1-201ENST00000336032 TRIM41Q8WV44 630 aa36.68■■■■□ 3.46
PNRC1-201ENST00000336032 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
PNRC1-201ENST00000336032 ABCC8Q09428 1581 aa36.41■■■■□ 3.42
PNRC1-201ENST00000336032 WRNQ14191 1432 aaPredicted RBP eCLIP36.11■■■■□ 3.37
PNRC1-201ENST00000336032 CFTRP13569 1480 aa36.11■■■■□ 3.37
PNRC1-201ENST00000336032 LOC105371045A0A1W2PR82 267 aa36.09■■■■□ 3.37
PNRC1-201ENST00000336032 FAM9AQ8IZU1 332 aaPredicted RBP36.06■■■■□ 3.36
PNRC1-201ENST00000336032 SYNJ1O43426 1573 aa35.97■■■■□ 3.35
PNRC1-201ENST00000336032 CADPSQ9ULU8 1353 aa35.94■■■■□ 3.34
PNRC1-201ENST00000336032 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
PNRC1-201ENST00000336032 TOP2BQ02880 1626 aa35.79■■■■□ 3.32
PNRC1-201ENST00000336032 SOGA1O94964 1423 aa35.77■■■■□ 3.32
PNRC1-201ENST00000336032 BIVM-ERCC5R4GMW8 1640 aa35.73■■■■□ 3.31
PNRC1-201ENST00000336032 DNAJC5BQ9UF47 199 aa35.7■■■■□ 3.31
PNRC1-201ENST00000336032 EEA1Q15075 1411 aa35.66■■■■□ 3.3
PNRC1-201ENST00000336032 CUX1P39880 1505 aa35.66■■■■□ 3.3
PNRC1-201ENST00000336032 RUSC2Q8N2Y8 1516 aa35.64■■■■□ 3.3
PNRC1-201ENST00000336032 NESP48681 1621 aa35.6■■■■□ 3.29
PNRC1-201ENST00000336032 EHMT2Q96KQ7 1210 aa35.58■■■■□ 3.29
PNRC1-201ENST00000336032 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
PNRC1-201ENST00000336032 FANCD2Q9BXW9 1451 aa35.55■■■■□ 3.28
PNRC1-201ENST00000336032 CSRNP3Q8WYN3 585 aa35.51■■■■□ 3.28
PNRC1-201ENST00000336032 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
PNRC1-201ENST00000336032 PDS5BQ9NTI5 1447 aa35.28■■■■□ 3.24
PNRC1-201ENST00000336032 DNMBPQ6XZF7 1577 aa35.25■■■■□ 3.23
PNRC1-201ENST00000336032 FGD5Q6ZNL6 1462 aa35.24■■■■□ 3.23
PNRC1-201ENST00000336032 GOLGA3Q08378 1498 aa35.21■■■■□ 3.23
PNRC1-201ENST00000336032 KIF21BO75037 1637 aa35.21■■■■□ 3.23
PNRC1-201ENST00000336032 TOPBP1Q92547 1522 aa35.19■■■■□ 3.22
PNRC1-201ENST00000336032 KIF27Q86VH2 1401 aa35.17■■■■□ 3.22
PNRC1-201ENST00000336032 TNIKQ9UKE5 1360 aa35.15■■■■□ 3.22
PNRC1-201ENST00000336032 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
PNRC1-201ENST00000336032 URB2Q14146 1524 aaKnown RBP35.1■■■■□ 3.21
PNRC1-201ENST00000336032 UBTFP17480 764 aaKnown RBP35.1■■■■□ 3.21
PNRC1-201ENST00000336032 CUX2O14529 1486 aa35.05■■■■□ 3.2
PNRC1-201ENST00000336032 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
PNRC1-201ENST00000336032 RAPGEF2Q9Y4G8 1499 aa35.03■■■■□ 3.2
PNRC1-201ENST00000336032 CEP162Q5TB80 1403 aa35■■■■□ 3.19
PNRC1-201ENST00000336032 PRXQ9BXM0 1461 aa35■■■■□ 3.19
PNRC1-201ENST00000336032 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
PNRC1-201ENST00000336032 ERICH3Q5RHP9 1530 aa34.93■■■■□ 3.18
PNRC1-201ENST00000336032 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
PNRC1-201ENST00000336032 IGF1RP08069 1367 aa34.86■■■■□ 3.17
PNRC1-201ENST00000336032 MRC2Q9UBG0 1479 aa34.82■■■■□ 3.16
PNRC1-201ENST00000336032 WDR97A6NE52 1622 aa34.77■■■■□ 3.16
PNRC1-201ENST00000336032 CARMIL1Q5VZK9 1371 aa34.69■■■■□ 3.14
PNRC1-201ENST00000336032 CLIP1P30622 1438 aa34.68■■■■□ 3.14
PNRC1-201ENST00000336032 PCGF6Q9BYE7 350 aa34.65■■■■□ 3.14
PNRC1-201ENST00000336032 ERCC6Q03468 1493 aa34.64■■■■□ 3.14
PNRC1-201ENST00000336032 TARBP1Q13395 1621 aaKnown RBP34.64■■■■□ 3.14
PNRC1-201ENST00000336032 WDR62O43379 1518 aa34.63■■■■□ 3.13
PNRC1-201ENST00000336032 ABCA5Q8WWZ7 1642 aa34.61■■■■□ 3.13
PNRC1-201ENST00000336032 TDRD9Q8NDG6 1382 aaKnown RBP34.6■■■■□ 3.13
PNRC1-201ENST00000336032 TRIM26Q12899 539 aaPredicted RBP34.55■■■■□ 3.12
PNRC1-201ENST00000336032 GAPVD1Q14C86 1478 aa34.54■■■■□ 3.12
PNRC1-201ENST00000336032 CUL7Q14999 1698 aa34.53■■■■□ 3.12
PNRC1-201ENST00000336032 RANGAP1P46060 587 aaPredicted RBP34.51■■■■□ 3.11
PNRC1-201ENST00000336032 THOC2Q8NI27 1593 aaKnown RBP34.48■■■■□ 3.11
PNRC1-201ENST00000336032 IFT140Q96RY7 1462 aa34.42■■■■□ 3.1
PNRC1-201ENST00000336032 PPARGC1BQ86YN6 1023 aaKnown RBP34.4■■■■□ 3.1
PNRC1-201ENST00000336032 VPS8Q8N3P4 1428 aa34.39■■■■□ 3.1
PNRC1-201ENST00000336032 AQRO60306 1485 aaKnown RBP eCLIP34.34■■■■□ 3.091e-8■■■■■ 53.1
PNRC1-201ENST00000336032 PBRM1Q86U86 1689 aa34.32■■■■□ 3.08
PNRC1-201ENST00000336032 ARAP1Q96P48 1450 aa34.32■■■■□ 3.08
PNRC1-201ENST00000336032 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
PNRC1-201ENST00000336032 ARHGAP35Q9NRY4 1499 aa34.27■■■■□ 3.08
PNRC1-201ENST00000336032 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
PNRC1-201ENST00000336032 CTTNBP2Q8WZ74 1663 aa34.2■■■■□ 3.06
PNRC1-201ENST00000336032 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms