RNA–Protein interactions for RNA: ENST00000356545.6

RSPO1-201, Transcript of R-spondin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO1, Length 2,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-201ENST00000356545 NISCHQ9Y2I1 1504 aa42.05■■■■■ 4.32
RSPO1-201ENST00000356545 SHROOM4Q9ULL8 1493 aa36.46■■■■□ 3.43
RSPO1-201ENST00000356545 SUPT5HO00267 1087 aaKnown RBP36.01■■■■□ 3.35
RSPO1-201ENST00000356545 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
RSPO1-201ENST00000356545 CCDC180Q9P1Z9 1646 aa35.31■■■■□ 3.24
RSPO1-201ENST00000356545 MYO15BQ96JP2 1530 aa35.29■■■■□ 3.24
RSPO1-201ENST00000356545 CHIC1Q5VXU3 224 aa35.25■■■■□ 3.23
RSPO1-201ENST00000356545 HRCP23327 699 aa35.09■■■■□ 3.21
RSPO1-201ENST00000356545 DCAF8L2P0C7V8 631 aa34.9■■■■□ 3.18
RSPO1-201ENST00000356545 PCGF6Q9BYE7 350 aa34.75■■■■□ 3.15
RSPO1-201ENST00000356545 PPARGC1BQ86YN6 1023 aaKnown RBP34.4■■■■□ 3.1
RSPO1-201ENST00000356545 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
RSPO1-201ENST00000356545 LOC105371045A0A1W2PR82 267 aa34.32■■■■□ 3.08
RSPO1-201ENST00000356545 TRIM26Q12899 539 aaPredicted RBP33.87■■■■□ 3.01
RSPO1-201ENST00000356545 ABCC9O60706 1549 aa33.74■■■□□ 2.99
RSPO1-201ENST00000356545 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
RSPO1-201ENST00000356545 TRIM41Q8WV44 630 aa33.42■■■□□ 2.94
RSPO1-201ENST00000356545 SCRIBQ14160 1630 aa33.39■■■□□ 2.94
RSPO1-201ENST00000356545 ZEB1P37275 1124 aaPredicted RBP33.28■■■□□ 2.92
RSPO1-201ENST00000356545 FAM9AQ8IZU1 332 aaPredicted RBP33.28■■■□□ 2.92
RSPO1-201ENST00000356545 RB1CC1Q8TDY2 1594 aa33.28■■■□□ 2.92
RSPO1-201ENST00000356545 EHMT2Q96KQ7 1210 aa33.05■■■□□ 2.88
RSPO1-201ENST00000356545 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.86
RSPO1-201ENST00000356545 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
RSPO1-201ENST00000356545 SCAF1Q9H7N4 1312 aaKnown RBP32.74■■■□□ 2.83
RSPO1-201ENST00000356545 WIZO95785 1651 aa32.61■■■□□ 2.81
RSPO1-201ENST00000356545 NACADO15069 1562 aa32.59■■■□□ 2.81
RSPO1-201ENST00000356545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.51■■■□□ 2.79
RSPO1-201ENST00000356545 PELP1Q8IZL8 1130 aaKnown RBP32.5■■■□□ 2.79
RSPO1-201ENST00000356545 CCER1Q8TC90 406 aaPredicted RBP32.38■■■□□ 2.77
RSPO1-201ENST00000356545 EIF4G1Q04637 1599 aaKnown RBP32.38■■■□□ 2.77
RSPO1-201ENST00000356545 BAZ1AQ9NRL2 1556 aaPredicted RBP32.37■■■□□ 2.77
RSPO1-201ENST00000356545 ACIN1Q9UKV3 1341 aaKnown RBP32.17■■■□□ 2.74
RSPO1-201ENST00000356545 NEUROD1Q13562 356 aa32.15■■■□□ 2.74
RSPO1-201ENST00000356545 CCDC88BA6NC98 1476 aa32.15■■■□□ 2.74
RSPO1-201ENST00000356545 ABCC8Q09428 1581 aa32.14■■■□□ 2.74
RSPO1-201ENST00000356545 WRNQ14191 1432 aaPredicted RBP eCLIP32.12■■■□□ 2.73
RSPO1-201ENST00000356545 TTBK1Q5TCY1 1321 aaPredicted RBP32.11■■■□□ 2.73
RSPO1-201ENST00000356545 DIEXFQ68CQ4 756 aaKnown RBP32.07■■■□□ 2.72
RSPO1-201ENST00000356545 CEP162Q5TB80 1403 aa32.05■■■□□ 2.72
RSPO1-201ENST00000356545 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
RSPO1-201ENST00000356545 SOGA1O94964 1423 aa31.99■■■□□ 2.71
RSPO1-201ENST00000356545 TNIKQ9UKE5 1360 aa31.93■■■□□ 2.7
RSPO1-201ENST00000356545 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
RSPO1-201ENST00000356545 SMARCA4P51532 1647 aa31.88■■■□□ 2.69
RSPO1-201ENST00000356545 GTF3C3Q9Y5Q9 886 aa31.85■■■□□ 2.69
RSPO1-201ENST00000356545 RUSC2Q8N2Y8 1516 aa31.83■■■□□ 2.69
RSPO1-201ENST00000356545 CSRNP3Q8WYN3 585 aa31.82■■■□□ 2.68
RSPO1-201ENST00000356545 CENPBP07199 599 aaPredicted RBP31.81■■■□□ 2.68
RSPO1-201ENST00000356545 UBTFP17480 764 aaKnown RBP31.77■■■□□ 2.68
RSPO1-201ENST00000356545 EEA1Q15075 1411 aa31.73■■■□□ 2.67
RSPO1-201ENST00000356545 ZNF316A6NFI3 1004 aaPredicted RBP31.66■■■□□ 2.66
RSPO1-201ENST00000356545 GOLGA3Q08378 1498 aa31.61■■■□□ 2.65
RSPO1-201ENST00000356545 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
RSPO1-201ENST00000356545 HNRNPUL2Q1KMD3 747 aaKnown RBP31.45■■■□□ 2.62
RSPO1-201ENST00000356545 YTHDC1Q96MU7 727 aaKnown RBP31.4■■■□□ 2.62
RSPO1-201ENST00000356545 CEP164Q9UPV0 1460 aa31.36■■■□□ 2.61
RSPO1-201ENST00000356545 MIER1Q8N108 512 aa31.36■■■□□ 2.61
RSPO1-201ENST00000356545 CLIP1P30622 1438 aa31.33■■■□□ 2.61
RSPO1-201ENST00000356545 SYNJ1O43426 1573 aa31.31■■■□□ 2.6
RSPO1-201ENST00000356545 PABPN1Q86U42 306 aaKnown RBP eCLIP31.31■■■□□ 2.6
RSPO1-201ENST00000356545 KIF21BO75037 1637 aa31.28■■■□□ 2.6
RSPO1-201ENST00000356545 VPS8Q8N3P4 1428 aa31.24■■■□□ 2.59
RSPO1-201ENST00000356545 PEG3Q9GZU2 1588 aa31.2■■■□□ 2.58
RSPO1-201ENST00000356545 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
RSPO1-201ENST00000356545 RAPGEF2Q9Y4G8 1499 aa31.15■■■□□ 2.58
RSPO1-201ENST00000356545 APLP2Q06481 763 aa31.1■■■□□ 2.57
RSPO1-201ENST00000356545 BAZ1BQ9UIG0 1483 aaKnown RBP31.1■■■□□ 2.57
RSPO1-201ENST00000356545 RANGAP1P46060 587 aaPredicted RBP31.09■■■□□ 2.57
RSPO1-201ENST00000356545 ATAD2BQ9ULI0 1458 aa30.99■■■□□ 2.55
RSPO1-201ENST00000356545 MYT1Q01538 1121 aa30.94■■■□□ 2.54
RSPO1-201ENST00000356545 DHX57Q6P158 1386 aaKnown RBP30.87■■■□□ 2.53
RSPO1-201ENST00000356545 CLSPNQ9HAW4 1339 aa30.82■■■□□ 2.52
RSPO1-201ENST00000356545 TOP2BQ02880 1626 aa30.81■■■□□ 2.52
RSPO1-201ENST00000356545 KANK4Q5T7N3 995 aaPredicted RBP30.78■■■□□ 2.52
RSPO1-201ENST00000356545 ARAP1Q96P48 1450 aa30.76■■■□□ 2.51
RSPO1-201ENST00000356545 PRXQ9BXM0 1461 aa30.73■■■□□ 2.51
RSPO1-201ENST00000356545 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
RSPO1-201ENST00000356545 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
RSPO1-201ENST00000356545 RRBP1Q9P2E9 1410 aaKnown RBP30.6■■■□□ 2.49
RSPO1-201ENST00000356545 SUPT16HQ9Y5B9 1047 aaKnown RBP30.55■■■□□ 2.48
RSPO1-201ENST00000356545 CUX2O14529 1486 aa30.49■■■□□ 2.47
RSPO1-201ENST00000356545 CUX1P39880 1505 aa30.46■■■□□ 2.47
RSPO1-201ENST00000356545 CCNB3Q8WWL7 1395 aa30.46■■■□□ 2.47
RSPO1-201ENST00000356545 KIF27Q86VH2 1401 aa30.43■■■□□ 2.46
RSPO1-201ENST00000356545 ARHGAP35Q9NRY4 1499 aa30.41■■■□□ 2.46
RSPO1-201ENST00000356545 ITGAEP38570 1179 aa30.41■■■□□ 2.46
RSPO1-201ENST00000356545 KCNH8Q96L42 1107 aa30.31■■■□□ 2.44
RSPO1-201ENST00000356545 RAB3GAP2Q9H2M9 1393 aa30.29■■■□□ 2.44
RSPO1-201ENST00000356545 MAPKBP1O60336 1514 aa30.25■■■□□ 2.43
RSPO1-201ENST00000356545 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
RSPO1-201ENST00000356545 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
RSPO1-201ENST00000356545 TSHZ2Q9NRE2 1034 aa30.2■■■□□ 2.43
RSPO1-201ENST00000356545 CFTRP13569 1480 aa30.19■■■□□ 2.42
RSPO1-201ENST00000356545 IGF1RP08069 1367 aa30.13■■■□□ 2.41
RSPO1-201ENST00000356545 TIAM1Q13009 1591 aa30.11■■■□□ 2.41
RSPO1-201ENST00000356545 SETD5Q9C0A6 1442 aa30.1■■■□□ 2.41
RSPO1-201ENST00000356545 SIN3AQ96ST3 1273 aa30.08■■■□□ 2.41
RSPO1-201ENST00000356545 PHLDB1Q86UU1 1377 aa30.07■■■□□ 2.4
RSPO1-201ENST00000356545 MAP3K1Q13233 1512 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms