RNA–Protein interactions for RNA: ENST00000383698.3

VGLL3-201, Transcript of vestigial like family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VGLL3, Length 2,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-201ENST00000383698 NISCHQ9Y2I1 1504 aa44.9■■■■■ 4.78
VGLL3-201ENST00000383698 SHROOM4Q9ULL8 1493 aa38.36■■■■□ 3.73
VGLL3-201ENST00000383698 CCDC180Q9P1Z9 1646 aa38.18■■■■□ 3.7
VGLL3-201ENST00000383698 ZCCHC6Q5VYS8 1495 aaKnown RBP37.96■■■■□ 3.67
VGLL3-201ENST00000383698 SUPT5HO00267 1087 aaKnown RBP37.53■■■■□ 3.6
VGLL3-201ENST00000383698 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
VGLL3-201ENST00000383698 DCAF1Q9Y4B6 1507 aa36.76■■■■□ 3.47
VGLL3-201ENST00000383698 CHIC1Q5VXU3 224 aa36.37■■■■□ 3.41
VGLL3-201ENST00000383698 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
VGLL3-201ENST00000383698 SCRIBQ14160 1630 aa35.9■■■■□ 3.34
VGLL3-201ENST00000383698 ABCC9O60706 1549 aa35.82■■■■□ 3.32
VGLL3-201ENST00000383698 RSF1Q96T23 1441 aaPredicted RBP35.51■■■■□ 3.27
VGLL3-201ENST00000383698 LOC105371045A0A1W2PR82 267 aa35.35■■■■□ 3.25
VGLL3-201ENST00000383698 NACADO15069 1562 aa35.33■■■■□ 3.25
VGLL3-201ENST00000383698 PCGF6Q9BYE7 350 aa35.2■■■■□ 3.22
VGLL3-201ENST00000383698 RB1CC1Q8TDY2 1594 aa35.18■■■■□ 3.22
VGLL3-201ENST00000383698 CECR2Q9BXF3 1484 aa35.09■■■■□ 3.21
VGLL3-201ENST00000383698 HRCP23327 699 aa35.06■■■■□ 3.2
VGLL3-201ENST00000383698 MROH2BQ7Z745 1585 aa34.94■■■■□ 3.18
VGLL3-201ENST00000383698 TRIM41Q8WV44 630 aa34.92■■■■□ 3.18
VGLL3-201ENST00000383698 WIZO95785 1651 aa34.77■■■■□ 3.16
VGLL3-201ENST00000383698 FAM9AQ8IZU1 332 aaPredicted RBP34.72■■■■□ 3.15
VGLL3-201ENST00000383698 EHMT2Q96KQ7 1210 aa34.5■■■■□ 3.11
VGLL3-201ENST00000383698 BAZ1AQ9NRL2 1556 aaPredicted RBP34.5■■■■□ 3.11
VGLL3-201ENST00000383698 TRIM26Q12899 539 aaPredicted RBP34.47■■■■□ 3.11
VGLL3-201ENST00000383698 PPARGC1BQ86YN6 1023 aaKnown RBP34.46■■■■□ 3.11
VGLL3-201ENST00000383698 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
VGLL3-201ENST00000383698 SMARCA4P51532 1647 aa34.24■■■■□ 3.07
VGLL3-201ENST00000383698 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
VGLL3-201ENST00000383698 TOP2AP11388 1531 aaKnown RBP34.17■■■■□ 3.06
VGLL3-201ENST00000383698 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
VGLL3-201ENST00000383698 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
VGLL3-201ENST00000383698 SMARCA2P51531 1590 aa34■■■■□ 3.03
VGLL3-201ENST00000383698 ABCC8Q09428 1581 aa33.99■■■■□ 3.03
VGLL3-201ENST00000383698 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
VGLL3-201ENST00000383698 SOGA1O94964 1423 aa33.62■■■□□ 2.97
VGLL3-201ENST00000383698 ZEB1P37275 1124 aaPredicted RBP33.61■■■□□ 2.97
VGLL3-201ENST00000383698 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
VGLL3-201ENST00000383698 RUSC2Q8N2Y8 1516 aa33.48■■■□□ 2.95
VGLL3-201ENST00000383698 CEP162Q5TB80 1403 aa33.41■■■□□ 2.94
VGLL3-201ENST00000383698 CSRNP3Q8WYN3 585 aa33.38■■■□□ 2.93
VGLL3-201ENST00000383698 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
VGLL3-201ENST00000383698 WRNQ14191 1432 aaPredicted RBP eCLIP33.37■■■□□ 2.93
VGLL3-201ENST00000383698 TTBK1Q5TCY1 1321 aaPredicted RBP33.35■■■□□ 2.93
VGLL3-201ENST00000383698 EEA1Q15075 1411 aa33.32■■■□□ 2.93
VGLL3-201ENST00000383698 TNIKQ9UKE5 1360 aa33.3■■■□□ 2.92
VGLL3-201ENST00000383698 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
VGLL3-201ENST00000383698 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
VGLL3-201ENST00000383698 SYNJ1O43426 1573 aa33.24■■■□□ 2.91
VGLL3-201ENST00000383698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.22■■■□□ 2.91
VGLL3-201ENST00000383698 GOLGA3Q08378 1498 aa33.17■■■□□ 2.9
VGLL3-201ENST00000383698 CCER1Q8TC90 406 aaPredicted RBP33.09■■■□□ 2.89
VGLL3-201ENST00000383698 CEP164Q9UPV0 1460 aa32.97■■■□□ 2.87
VGLL3-201ENST00000383698 KIF21BO75037 1637 aa32.92■■■□□ 2.86
VGLL3-201ENST00000383698 RAPGEF2Q9Y4G8 1499 aa32.81■■■□□ 2.84
VGLL3-201ENST00000383698 CLIP1P30622 1438 aa32.8■■■□□ 2.84
VGLL3-201ENST00000383698 TOP2BQ02880 1626 aa32.79■■■□□ 2.84
VGLL3-201ENST00000383698 RANGAP1P46060 587 aaPredicted RBP32.77■■■□□ 2.84
VGLL3-201ENST00000383698 NCAPD3P42695 1498 aa32.69■■■□□ 2.82
VGLL3-201ENST00000383698 HMGXB3Q12766 1538 aa32.69■■■□□ 2.82
VGLL3-201ENST00000383698 BIVM-ERCC5R4GMW8 1640 aa32.67■■■□□ 2.82
VGLL3-201ENST00000383698 VPS8Q8N3P4 1428 aa32.62■■■□□ 2.81
VGLL3-201ENST00000383698 CUX1P39880 1505 aa32.54■■■□□ 2.8
VGLL3-201ENST00000383698 HNRNPUL2Q1KMD3 747 aaKnown RBP32.53■■■□□ 2.8
VGLL3-201ENST00000383698 APLP2Q06481 763 aa32.5■■■□□ 2.79
VGLL3-201ENST00000383698 PRXQ9BXM0 1461 aa32.44■■■□□ 2.78
VGLL3-201ENST00000383698 CFTRP13569 1480 aa32.43■■■□□ 2.78
VGLL3-201ENST00000383698 ERICH3Q5RHP9 1530 aa32.4■■■□□ 2.78
VGLL3-201ENST00000383698 DIEXFQ68CQ4 756 aaKnown RBP32.35■■■□□ 2.77
VGLL3-201ENST00000383698 KIF27Q86VH2 1401 aa32.33■■■□□ 2.77
VGLL3-201ENST00000383698 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
VGLL3-201ENST00000383698 SCAF1Q9H7N4 1312 aaKnown RBP32.27■■■□□ 2.76
VGLL3-201ENST00000383698 PRDM2Q13029 1718 aa32.16■■■□□ 2.74
VGLL3-201ENST00000383698 KANK4Q5T7N3 995 aaPredicted RBP32.14■■■□□ 2.73
VGLL3-201ENST00000383698 ZNF316A6NFI3 1004 aaPredicted RBP32.12■■■□□ 2.73
VGLL3-201ENST00000383698 CADPSQ9ULU8 1353 aa32.1■■■□□ 2.73
VGLL3-201ENST00000383698 CUX2O14529 1486 aa32.09■■■□□ 2.73
VGLL3-201ENST00000383698 ARHGAP35Q9NRY4 1499 aa32.03■■■□□ 2.72
VGLL3-201ENST00000383698 CC2D2AQ9P2K1 1620 aa32■■■□□ 2.71
VGLL3-201ENST00000383698 IGF1RP08069 1367 aa31.99■■■□□ 2.71
VGLL3-201ENST00000383698 NEUROD1Q13562 356 aa31.99■■■□□ 2.71
VGLL3-201ENST00000383698 FGD5Q6ZNL6 1462 aa31.98■■■□□ 2.71
VGLL3-201ENST00000383698 ACIN1Q9UKV3 1341 aaKnown RBP31.97■■■□□ 2.71
VGLL3-201ENST00000383698 CARMIL1Q5VZK9 1371 aa31.86■■■□□ 2.69
VGLL3-201ENST00000383698 FANCD2Q9BXW9 1451 aa31.83■■■□□ 2.69
VGLL3-201ENST00000383698 RRBP1Q9P2E9 1410 aaKnown RBP31.82■■■□□ 2.68
VGLL3-201ENST00000383698 DHX57Q6P158 1386 aaKnown RBP31.81■■■□□ 2.68
VGLL3-201ENST00000383698 CENPBP07199 599 aaPredicted RBP31.8■■■□□ 2.68
VGLL3-201ENST00000383698 ITGAEP38570 1179 aa31.75■■■□□ 2.67
VGLL3-201ENST00000383698 CCNB3Q8WWL7 1395 aa31.74■■■□□ 2.67
VGLL3-201ENST00000383698 RAD54L2Q9Y4B4 1467 aa31.7■■■□□ 2.67
VGLL3-201ENST00000383698 NESP48681 1621 aa31.69■■■□□ 2.66
VGLL3-201ENST00000383698 MIER1Q8N108 512 aa31.69■■■□□ 2.66
VGLL3-201ENST00000383698 YTHDC1Q96MU7 727 aaKnown RBP31.68■■■□□ 2.66
VGLL3-201ENST00000383698 P3H3Q8IVL6 736 aa31.66■■■□□ 2.66
VGLL3-201ENST00000383698 TIAM1Q13009 1591 aa31.65■■■□□ 2.66
VGLL3-201ENST00000383698 CLSPNQ9HAW4 1339 aa31.65■■■□□ 2.66
VGLL3-201ENST00000383698 GTF3C3Q9Y5Q9 886 aa31.64■■■□□ 2.66
VGLL3-201ENST00000383698 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.65
VGLL3-201ENST00000383698 TOPBP1Q92547 1522 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms