Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC53A6NM62 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC53A6NM62 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.63■■□□□ 1.37
LRRC53A6NM62 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC53A6NM62 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC53A6NM62 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
LRRC53A6NM62 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC53A6NM62 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC53A6NM62 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC53A6NM62 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC53A6NM62 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.62■■□□□ 1.37
LRRC53A6NM62 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC53A6NM62 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
LRRC53A6NM62 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.61■■□□□ 1.37
LRRC53A6NM62 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
LRRC53A6NM62 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.61■■□□□ 1.37
LRRC53A6NM62 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.61■■□□□ 1.37
LRRC53A6NM62 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.61■■□□□ 1.37
LRRC53A6NM62 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC53A6NM62 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
LRRC53A6NM62 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC53A6NM62 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC53A6NM62 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC53A6NM62 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
LRRC53A6NM62 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC53A6NM62 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC53A6NM62 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.6■■□□□ 1.37
LRRC53A6NM62 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.6■■□□□ 1.37
LRRC53A6NM62 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.6■■□□□ 1.37
LRRC53A6NM62 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.59■■□□□ 1.37
LRRC53A6NM62 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.59■■□□□ 1.37
LRRC53A6NM62 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
LRRC53A6NM62 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC53A6NM62 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.59■■□□□ 1.37
LRRC53A6NM62 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC53A6NM62 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
LRRC53A6NM62 AL137060.1-201ENST00000618151 2648 ntBASIC23.59■■□□□ 1.37
LRRC53A6NM62 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC53A6NM62 UNC93B8-201ENST00000511903 705 ntBASIC23.59■■□□□ 1.37
LRRC53A6NM62 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC53A6NM62 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.59■■□□□ 1.37
LRRC53A6NM62 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.59■■□□□ 1.37
LRRC53A6NM62 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.58■■□□□ 1.37
LRRC53A6NM62 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
LRRC53A6NM62 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
LRRC53A6NM62 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.58■■□□□ 1.37
LRRC53A6NM62 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.58■■□□□ 1.37
LRRC53A6NM62 CA15P2-201ENST00000611168 834 ntBASIC23.58■■□□□ 1.37
LRRC53A6NM62 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
LRRC53A6NM62 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC53A6NM62 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LRRC53A6NM62 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.58■■□□□ 1.36
LRRC53A6NM62 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 AC010542.4-201ENST00000563151 1910 ntBASIC23.57■■□□□ 1.36
LRRC53A6NM62 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.57■■□□□ 1.36
LRRC53A6NM62 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.57■■□□□ 1.36
LRRC53A6NM62 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.57■■□□□ 1.36
LRRC53A6NM62 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.57■■□□□ 1.36
LRRC53A6NM62 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC53A6NM62 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC53A6NM62 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC53A6NM62 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC53A6NM62 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC53A6NM62 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.56■■□□□ 1.36
LRRC53A6NM62 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.56■■□□□ 1.36
LRRC53A6NM62 AL499627.2-201ENST00000606283 725 ntBASIC23.56■■□□□ 1.36
LRRC53A6NM62 MIR6724-1-201ENST00000616420 92 ntBASIC23.56■■□□□ 1.36
LRRC53A6NM62 MIR6724-2-201ENST00000616483 92 ntBASIC23.56■■□□□ 1.36
LRRC53A6NM62 MIR6724-4-201ENST00000617390 92 ntBASIC23.56■■□□□ 1.36
LRRC53A6NM62 MIR6724-3-201ENST00000622482 92 ntBASIC23.56■■□□□ 1.36
LRRC53A6NM62 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRC53A6NM62 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
LRRC53A6NM62 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC53A6NM62 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC53A6NM62 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC53A6NM62 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LRRC53A6NM62 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC53A6NM62 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms