RNA–Protein interactions for RNA: ENST00000281043.3

MYCN-201, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MYCN, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-201ENST00000281043 NISCHQ9Y2I1 1504 aa42.92■■■■■ 4.46
MYCN-201ENST00000281043 CCDC180Q9P1Z9 1646 aa36.62■■■■□ 3.45
MYCN-201ENST00000281043 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
MYCN-201ENST00000281043 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
MYCN-201ENST00000281043 HRCP23327 699 aa36.09■■■■□ 3.37
MYCN-201ENST00000281043 SUPT5HO00267 1087 aaKnown RBP36■■■■□ 3.35
MYCN-201ENST00000281043 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
MYCN-201ENST00000281043 MYO15BQ96JP2 1530 aa35.48■■■■□ 3.27
MYCN-201ENST00000281043 CHIC1Q5VXU3 224 aa35.37■■■■□ 3.25
MYCN-201ENST00000281043 PCGF6Q9BYE7 350 aa35.31■■■■□ 3.24
MYCN-201ENST00000281043 PPARGC1BQ86YN6 1023 aaKnown RBP35.19■■■■□ 3.22
MYCN-201ENST00000281043 DCAF1Q9Y4B6 1507 aa35.12■■■■□ 3.21
MYCN-201ENST00000281043 PELP1Q8IZL8 1130 aaKnown RBP34.81■■■■□ 3.16
MYCN-201ENST00000281043 ABCC9O60706 1549 aa34.63■■■■□ 3.13
MYCN-201ENST00000281043 LOC105371045A0A1W2PR82 267 aa34.45■■■■□ 3.1
MYCN-201ENST00000281043 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
MYCN-201ENST00000281043 TRIM26Q12899 539 aaPredicted RBP34.35■■■■□ 3.09
MYCN-201ENST00000281043 ZEB1P37275 1124 aaPredicted RBP34.05■■■■□ 3.04
MYCN-201ENST00000281043 NACADO15069 1562 aa34.04■■■■□ 3.04
MYCN-201ENST00000281043 SCAF1Q9H7N4 1312 aaKnown RBP34.04■■■■□ 3.04
MYCN-201ENST00000281043 RSF1Q96T23 1441 aaPredicted RBP33.8■■■■□ 3
MYCN-201ENST00000281043 RB1CC1Q8TDY2 1594 aa33.62■■■□□ 2.97
MYCN-201ENST00000281043 CECR2Q9BXF3 1484 aa33.61■■■□□ 2.97
MYCN-201ENST00000281043 MYT1Q01538 1121 aa33.47■■■□□ 2.95
MYCN-201ENST00000281043 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
MYCN-201ENST00000281043 MROH2BQ7Z745 1585 aa33.39■■■□□ 2.94
MYCN-201ENST00000281043 ACIN1Q9UKV3 1341 aaKnown RBP33.29■■■□□ 2.92
MYCN-201ENST00000281043 FAM9AQ8IZU1 332 aaPredicted RBP33.26■■■□□ 2.91
MYCN-201ENST00000281043 WIZO95785 1651 aa33.16■■■□□ 2.9
MYCN-201ENST00000281043 NEUROD1Q13562 356 aa33.14■■■□□ 2.9
MYCN-201ENST00000281043 UNC13AQ9UPW8 1703 aa33.1■■■□□ 2.89
MYCN-201ENST00000281043 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
MYCN-201ENST00000281043 EHMT2Q96KQ7 1210 aa33.02■■■□□ 2.88
MYCN-201ENST00000281043 BAZ1AQ9NRL2 1556 aaPredicted RBP32.97■■■□□ 2.87
MYCN-201ENST00000281043 GTF3C3Q9Y5Q9 886 aa32.96■■■□□ 2.87
MYCN-201ENST00000281043 CENPBP07199 599 aaPredicted RBP32.91■■■□□ 2.86
MYCN-201ENST00000281043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.85■■■□□ 2.85
MYCN-201ENST00000281043 CCER1Q8TC90 406 aaPredicted RBP32.82■■■□□ 2.84
MYCN-201ENST00000281043 BICRAQ9NZM4 1560 aa32.8■■■□□ 2.84
MYCN-201ENST00000281043 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
MYCN-201ENST00000281043 DIEXFQ68CQ4 756 aaKnown RBP32.74■■■□□ 2.83
MYCN-201ENST00000281043 TOP2AP11388 1531 aaKnown RBP32.58■■■□□ 2.81
MYCN-201ENST00000281043 CCDC88BA6NC98 1476 aa32.51■■■□□ 2.79
MYCN-201ENST00000281043 SMARCA2P51531 1590 aa32.42■■■□□ 2.78
MYCN-201ENST00000281043 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
MYCN-201ENST00000281043 ABCC8Q09428 1581 aa32.27■■■□□ 2.76
MYCN-201ENST00000281043 WRNQ14191 1432 aaPredicted RBP eCLIP32.22■■■□□ 2.75
MYCN-201ENST00000281043 TTBK1Q5TCY1 1321 aaPredicted RBP32.2■■■□□ 2.75
MYCN-201ENST00000281043 ZNF316A6NFI3 1004 aaPredicted RBP32.18■■■□□ 2.74
MYCN-201ENST00000281043 PEG3Q9GZU2 1588 aa32.13■■■□□ 2.73
MYCN-201ENST00000281043 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
MYCN-201ENST00000281043 YTHDC1Q96MU7 727 aaKnown RBP32.09■■■□□ 2.73
MYCN-201ENST00000281043 CEP162Q5TB80 1403 aa32.06■■■□□ 2.72
MYCN-201ENST00000281043 BAZ1BQ9UIG0 1483 aaKnown RBP31.99■■■□□ 2.71
MYCN-201ENST00000281043 TNIKQ9UKE5 1360 aa31.91■■■□□ 2.7
MYCN-201ENST00000281043 SOGA1O94964 1423 aa31.88■■■□□ 2.69
MYCN-201ENST00000281043 MIER1Q8N108 512 aa31.87■■■□□ 2.69
MYCN-201ENST00000281043 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
MYCN-201ENST00000281043 UBTFP17480 764 aaKnown RBP31.72■■■□□ 2.67
MYCN-201ENST00000281043 CSRNP3Q8WYN3 585 aa31.69■■■□□ 2.66
MYCN-201ENST00000281043 EEA1Q15075 1411 aa31.67■■■□□ 2.66
MYCN-201ENST00000281043 SYNJ1O43426 1573 aa31.62■■■□□ 2.65
MYCN-201ENST00000281043 HNRNPUL2Q1KMD3 747 aaKnown RBP31.6■■■□□ 2.65
MYCN-201ENST00000281043 NCAPD3P42695 1498 aa31.56■■■□□ 2.64
MYCN-201ENST00000281043 GOLGA3Q08378 1498 aa31.55■■■□□ 2.64
MYCN-201ENST00000281043 CLSPNQ9HAW4 1339 aa31.54■■■□□ 2.64
MYCN-201ENST00000281043 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
MYCN-201ENST00000281043 SUPT16HQ9Y5B9 1047 aaKnown RBP31.43■■■□□ 2.62
MYCN-201ENST00000281043 ANP32EQ9BTT0 268 aa31.33■■■□□ 2.61
MYCN-201ENST00000281043 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
MYCN-201ENST00000281043 TSHZ2Q9NRE2 1034 aa31.27■■■□□ 2.6
MYCN-201ENST00000281043 CLIP1P30622 1438 aa31.26■■■□□ 2.6
MYCN-201ENST00000281043 VPS8Q8N3P4 1428 aa31.23■■■□□ 2.59
MYCN-201ENST00000281043 APLP2Q06481 763 aa31.22■■■□□ 2.59
MYCN-201ENST00000281043 TOP2BQ02880 1626 aa31.21■■■□□ 2.59
MYCN-201ENST00000281043 KIF21BO75037 1637 aa31.19■■■□□ 2.58
MYCN-201ENST00000281043 CFTRP13569 1480 aa31.17■■■□□ 2.58
MYCN-201ENST00000281043 BCL11AQ9H165 835 aa31.16■■■□□ 2.58
MYCN-201ENST00000281043 RANGAP1P46060 587 aaPredicted RBP31.12■■■□□ 2.57
MYCN-201ENST00000281043 CUX1P39880 1505 aa31.11■■■□□ 2.57
MYCN-201ENST00000281043 RAPGEF2Q9Y4G8 1499 aa31.1■■■□□ 2.57
MYCN-201ENST00000281043 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
MYCN-201ENST00000281043 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
MYCN-201ENST00000281043 DHX57Q6P158 1386 aaKnown RBP31.03■■■□□ 2.56
MYCN-201ENST00000281043 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
MYCN-201ENST00000281043 PRXQ9BXM0 1461 aa30.8■■■□□ 2.52
MYCN-201ENST00000281043 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
MYCN-201ENST00000281043 PRDM2Q13029 1718 aa30.72■■■□□ 2.51
MYCN-201ENST00000281043 DNAJC5BQ9UF47 199 aa30.72■■■□□ 2.51
MYCN-201ENST00000281043 NESP48681 1621 aa30.7■■■□□ 2.51
MYCN-201ENST00000281043 CUX2O14529 1486 aa30.67■■■□□ 2.5
MYCN-201ENST00000281043 KANK4Q5T7N3 995 aaPredicted RBP30.67■■■□□ 2.5
MYCN-201ENST00000281043 ERICH3Q5RHP9 1530 aa30.66■■■□□ 2.5
MYCN-201ENST00000281043 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
MYCN-201ENST00000281043 BCANQ96GW7 911 aa30.65■■■□□ 2.5
MYCN-201ENST00000281043 FGD5Q6ZNL6 1462 aa30.65■■■□□ 2.5
MYCN-201ENST00000281043 KCNH8Q96L42 1107 aa30.64■■■□□ 2.5
MYCN-201ENST00000281043 RRBP1Q9P2E9 1410 aaKnown RBP30.63■■■□□ 2.49
MYCN-201ENST00000281043 ARAP1Q96P48 1450 aa30.62■■■□□ 2.49
MYCN-201ENST00000281043 FKBP8Q14318 412 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms