RNA–Protein interactions for RNA: ENST00000395389.2

SPN-202, Transcript of sialophorin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPN, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-202ENST00000395389 NISCHQ9Y2I1 1504 aa47.58■■■■■ 5.21
SPN-202ENST00000395389 CCDC180Q9P1Z9 1646 aa41.21■■■■■ 4.19
SPN-202ENST00000395389 ZCCHC6Q5VYS8 1495 aaKnown RBP40.03■■■■■ 4
SPN-202ENST00000395389 DCAF8L2P0C7V8 631 aa39.44■■■■□ 3.9
SPN-202ENST00000395389 DCAF1Q9Y4B6 1507 aa39.28■■■■□ 3.88
SPN-202ENST00000395389 SHROOM4Q9ULL8 1493 aa39.26■■■■□ 3.88
SPN-202ENST00000395389 ABCC9O60706 1549 aa38.81■■■■□ 3.8
SPN-202ENST00000395389 MYO15BQ96JP2 1530 aa38.66■■■■□ 3.78
SPN-202ENST00000395389 NACADO15069 1562 aa38.36■■■■□ 3.73
SPN-202ENST00000395389 SCRIBQ14160 1630 aa38.08■■■■□ 3.69
SPN-202ENST00000395389 SUPT5HO00267 1087 aaKnown RBP38.02■■■■□ 3.68
SPN-202ENST00000395389 RB1CC1Q8TDY2 1594 aa37.96■■■■□ 3.67
SPN-202ENST00000395389 UNC13AQ9UPW8 1703 aa37.14■■■■□ 3.54
SPN-202ENST00000395389 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
SPN-202ENST00000395389 CECR2Q9BXF3 1484 aa37■■■■□ 3.51
SPN-202ENST00000395389 MROH2BQ7Z745 1585 aa36.8■■■■□ 3.48
SPN-202ENST00000395389 BICRAQ9NZM4 1560 aa36.78■■■■□ 3.48
SPN-202ENST00000395389 PABPN1Q86U42 306 aaKnown RBP eCLIP36.77■■■■□ 3.48
SPN-202ENST00000395389 BAZ1AQ9NRL2 1556 aaPredicted RBP36.71■■■■□ 3.47
SPN-202ENST00000395389 CHIC1Q5VXU3 224 aa36.51■■■■□ 3.44
SPN-202ENST00000395389 WIZO95785 1651 aa36.51■■■■□ 3.43
SPN-202ENST00000395389 SMARCA4P51532 1647 aa36.47■■■■□ 3.43
SPN-202ENST00000395389 TOP2AP11388 1531 aaKnown RBP36.11■■■■□ 3.37
SPN-202ENST00000395389 PEG3Q9GZU2 1588 aa35.97■■■■□ 3.35
SPN-202ENST00000395389 ATAD2BQ9ULI0 1458 aa35.83■■■■□ 3.33
SPN-202ENST00000395389 CCDC88BA6NC98 1476 aa35.81■■■■□ 3.32
SPN-202ENST00000395389 SMARCA2P51531 1590 aa35.79■■■■□ 3.32
SPN-202ENST00000395389 TRIM41Q8WV44 630 aa35.69■■■■□ 3.3
SPN-202ENST00000395389 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
SPN-202ENST00000395389 BAZ1BQ9UIG0 1483 aaKnown RBP35.67■■■■□ 3.3
SPN-202ENST00000395389 NCAPD3P42695 1498 aa35.44■■■■□ 3.26
SPN-202ENST00000395389 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
SPN-202ENST00000395389 LOC105371045A0A1W2PR82 267 aa35.2■■■■□ 3.22
SPN-202ENST00000395389 ABCC8Q09428 1581 aa35.18■■■■□ 3.22
SPN-202ENST00000395389 FAM9AQ8IZU1 332 aaPredicted RBP35.09■■■■□ 3.21
SPN-202ENST00000395389 CC2D2AQ9P2K1 1620 aa35.06■■■■□ 3.2
SPN-202ENST00000395389 WRNQ14191 1432 aaPredicted RBP eCLIP34.93■■■■□ 3.181e-6■□□□□ 9.9
SPN-202ENST00000395389 CFTRP13569 1480 aa34.76■■■■□ 3.16
SPN-202ENST00000395389 SYNJ1O43426 1573 aa34.71■■■■□ 3.15
SPN-202ENST00000395389 SOGA1O94964 1423 aa34.64■■■■□ 3.14
SPN-202ENST00000395389 EHMT2Q96KQ7 1210 aa34.63■■■■□ 3.13
SPN-202ENST00000395389 CADPSQ9ULU8 1353 aa34.61■■■■□ 3.13
SPN-202ENST00000395389 EEA1Q15075 1411 aa34.61■■■■□ 3.13
SPN-202ENST00000395389 TOP2BQ02880 1626 aa34.53■■■■□ 3.12
SPN-202ENST00000395389 CSRNP3Q8WYN3 585 aa34.48■■■■□ 3.11
SPN-202ENST00000395389 PRDM2Q13029 1718 aa34.48■■■■□ 3.11
SPN-202ENST00000395389 RUSC2Q8N2Y8 1516 aa34.48■■■■□ 3.11
SPN-202ENST00000395389 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
SPN-202ENST00000395389 CUX1P39880 1505 aa34.37■■■■□ 3.09
SPN-202ENST00000395389 FANCD2Q9BXW9 1451 aa34.21■■■■□ 3.07
SPN-202ENST00000395389 DNAJC5BQ9UF47 199 aa34.18■■■■□ 3.06
SPN-202ENST00000395389 NESP48681 1621 aa34.17■■■■□ 3.06
SPN-202ENST00000395389 GOLGA3Q08378 1498 aa34.16■■■■□ 3.06
SPN-202ENST00000395389 TNIKQ9UKE5 1360 aa34.15■■■■□ 3.06
SPN-202ENST00000395389 UBTFP17480 764 aaKnown RBP34.14■■■■□ 3.06
SPN-202ENST00000395389 LAMC3Q9Y6N6 1575 aa34.14■■■■□ 3.06
SPN-202ENST00000395389 CEP164Q9UPV0 1460 aa34.13■■■■□ 3.05
SPN-202ENST00000395389 KIF21BO75037 1637 aa34.08■■■■□ 3.05
SPN-202ENST00000395389 KIF27Q86VH2 1401 aa34.03■■■■□ 3.04
SPN-202ENST00000395389 PCGF6Q9BYE7 350 aa34.02■■■■□ 3.04
SPN-202ENST00000395389 CEP162Q5TB80 1403 aa34■■■■□ 3.03
SPN-202ENST00000395389 FGD5Q6ZNL6 1462 aa33.96■■■■□ 3.03
SPN-202ENST00000395389 PDS5BQ9NTI5 1447 aa33.95■■■■□ 3.03
SPN-202ENST00000395389 DNMBPQ6XZF7 1577 aa33.92■■■■□ 3.02
SPN-202ENST00000395389 RAPGEF2Q9Y4G8 1499 aa33.91■■■■□ 3.02
SPN-202ENST00000395389 TRIM26Q12899 539 aaPredicted RBP33.87■■■■□ 3.01
SPN-202ENST00000395389 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
SPN-202ENST00000395389 CUX2O14529 1486 aa33.85■■■■□ 3.01
SPN-202ENST00000395389 PRXQ9BXM0 1461 aa33.85■■■■□ 3.01
SPN-202ENST00000395389 ERICH3Q5RHP9 1530 aa33.8■■■■□ 3
SPN-202ENST00000395389 URB2Q14146 1524 aaKnown RBP33.74■■■□□ 2.99
SPN-202ENST00000395389 POLA1P09884 1462 aaPredicted RBP33.74■■■□□ 2.99
SPN-202ENST00000395389 IGF1RP08069 1367 aa33.69■■■□□ 2.98
SPN-202ENST00000395389 KIF21AQ7Z4S6 1674 aa33.68■■■□□ 2.98
SPN-202ENST00000395389 RAD54L2Q9Y4B4 1467 aa33.67■■■□□ 2.98
SPN-202ENST00000395389 CLIP1P30622 1438 aa33.67■■■□□ 2.98
SPN-202ENST00000395389 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
SPN-202ENST00000395389 PPARGC1BQ86YN6 1023 aaKnown RBP33.55■■■□□ 2.96
SPN-202ENST00000395389 CARMIL1Q5VZK9 1371 aa33.55■■■□□ 2.96
SPN-202ENST00000395389 RANGAP1P46060 587 aaPredicted RBP33.52■■■□□ 2.96
SPN-202ENST00000395389 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
SPN-202ENST00000395389 VPS8Q8N3P4 1428 aa33.4■■■□□ 2.94
SPN-202ENST00000395389 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
SPN-202ENST00000395389 TDRD9Q8NDG6 1382 aaKnown RBP33.36■■■□□ 2.93
SPN-202ENST00000395389 GAPVD1Q14C86 1478 aa33.3■■■□□ 2.92
SPN-202ENST00000395389 CUL7Q14999 1698 aa33.3■■■□□ 2.92
SPN-202ENST00000395389 ABCA5Q8WWZ7 1642 aa33.29■■■□□ 2.92
SPN-202ENST00000395389 HRCP23327 699 aa33.28■■■□□ 2.92
SPN-202ENST00000395389 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
SPN-202ENST00000395389 ERCC6Q03468 1493 aa33.26■■■□□ 2.91
SPN-202ENST00000395389 TTBK1Q5TCY1 1321 aaPredicted RBP33.23■■■□□ 2.91
SPN-202ENST00000395389 ARAP1Q96P48 1450 aa33.22■■■□□ 2.91
SPN-202ENST00000395389 APLP2Q06481 763 aa33.22■■■□□ 2.91
SPN-202ENST00000395389 WDR62O43379 1518 aa33.21■■■□□ 2.91
SPN-202ENST00000395389 ARHGAP35Q9NRY4 1499 aa33.17■■■□□ 2.9
SPN-202ENST00000395389 IFT140Q96RY7 1462 aa33.1■■■□□ 2.89
SPN-202ENST00000395389 AQRO60306 1485 aaKnown RBP eCLIP33.06■■■□□ 2.883e-7■■■■■ 36.6
SPN-202ENST00000395389 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
SPN-202ENST00000395389 PBRM1Q86U86 1689 aa32.98■■■□□ 2.87
SPN-202ENST00000395389 CTTNBP2Q8WZ74 1663 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms