RNA–Protein interactions for RNA: ENST00000355836.9

HNRNPAB-201, Transcript of heterogeneous nuclear ribonucleoprotein A/B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPAB, Length 1,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPAB-201ENST00000355836 NISCHQ9Y2I1 1504 aa53.74■■■■■ 6.19
HNRNPAB-201ENST00000355836 CCDC180Q9P1Z9 1646 aa47.57■■■■■ 5.21
HNRNPAB-201ENST00000355836 ABCC9O60706 1549 aa46.48■■■■■ 5.03
HNRNPAB-201ENST00000355836 DCAF8L2P0C7V8 631 aa45.07■■■■■ 4.81
HNRNPAB-201ENST00000355836 ZCCHC6Q5VYS8 1495 aaKnown RBP44.81■■■■■ 4.76
HNRNPAB-201ENST00000355836 RB1CC1Q8TDY2 1594 aa44.73■■■■■ 4.75
HNRNPAB-201ENST00000355836 NACADO15069 1562 aa44.72■■■■■ 4.75
HNRNPAB-201ENST00000355836 MYO15BQ96JP2 1530 aa44.46■■■■■ 4.71
HNRNPAB-201ENST00000355836 DCAF1Q9Y4B6 1507 aa44.39■■■■■ 4.7
HNRNPAB-201ENST00000355836 UNC13AQ9UPW8 1703 aa43.63■■■■■ 4.58
HNRNPAB-201ENST00000355836 SCRIBQ14160 1630 aa43.58■■■■■ 4.57
HNRNPAB-201ENST00000355836 PABPN1Q86U42 306 aaKnown RBP eCLIP43.55■■■■■ 4.56
HNRNPAB-201ENST00000355836 BICRAQ9NZM4 1560 aa43.32■■■■■ 4.53
HNRNPAB-201ENST00000355836 SHROOM4Q9ULL8 1493 aa42.85■■■■■ 4.45
HNRNPAB-201ENST00000355836 DNAJC5BQ9UF47 199 aa42.39■■■■■ 4.38
HNRNPAB-201ENST00000355836 EIF4G1Q04637 1599 aaKnown RBP42.21■■■■■ 4.35
HNRNPAB-201ENST00000355836 CC2D2AQ9P2K1 1620 aa41.98■■■■■ 4.31
HNRNPAB-201ENST00000355836 CECR2Q9BXF3 1484 aa41.89■■■■■ 4.3
HNRNPAB-201ENST00000355836 BAZ1AQ9NRL2 1556 aaPredicted RBP41.64■■■■■ 4.26
HNRNPAB-201ENST00000355836 SMARCA4P51532 1647 aa41.63■■■■■ 4.26
HNRNPAB-201ENST00000355836 MROH2BQ7Z745 1585 aa41.45■■■■■ 4.23
HNRNPAB-201ENST00000355836 ATAD2BQ9ULI0 1458 aa41.37■■■■■ 4.21
HNRNPAB-201ENST00000355836 SMARCA2P51531 1590 aa41.31■■■■■ 4.2
HNRNPAB-201ENST00000355836 NCAPD3P42695 1498 aa41.27■■■■■ 4.2
HNRNPAB-201ENST00000355836 PEG3Q9GZU2 1588 aa41.15■■■■■ 4.18
HNRNPAB-201ENST00000355836 BAZ1BQ9UIG0 1483 aaKnown RBP41.09■■■■■ 4.17
HNRNPAB-201ENST00000355836 RSF1Q96T23 1441 aaPredicted RBP41.08■■■■■ 4.17
HNRNPAB-201ENST00000355836 HMGXB3Q12766 1538 aa41.07■■■■■ 4.17
HNRNPAB-201ENST00000355836 WIZO95785 1651 aa41.02■■■■■ 4.16
HNRNPAB-201ENST00000355836 TOP2AP11388 1531 aaKnown RBP40.57■■■■■ 4.09
HNRNPAB-201ENST00000355836 SUPT5HO00267 1087 aaKnown RBP40.44■■■■■ 4.06
HNRNPAB-201ENST00000355836 NESP48681 1621 aa40.27■■■■■ 4.04
HNRNPAB-201ENST00000355836 CADPSQ9ULU8 1353 aa40.14■■■■■ 4.02
HNRNPAB-201ENST00000355836 LAMC3Q9Y6N6 1575 aa40.14■■■■■ 4.02
HNRNPAB-201ENST00000355836 CCDC88BA6NC98 1476 aa40.13■■■■■ 4.01
HNRNPAB-201ENST00000355836 ERCC6Q03468 1493 aa40.07■■■■■ 4.01
HNRNPAB-201ENST00000355836 PDS5BQ9NTI5 1447 aa39.93■■■■□ 3.98
HNRNPAB-201ENST00000355836 CFTRP13569 1480 aa39.92■■■■□ 3.98
HNRNPAB-201ENST00000355836 KIF21AQ7Z4S6 1674 aa39.73■■■■□ 3.95
HNRNPAB-201ENST00000355836 FANCD2Q9BXW9 1451 aa39.69■■■■□ 3.94
HNRNPAB-201ENST00000355836 CEP164Q9UPV0 1460 aa39.62■■■■□ 3.93
HNRNPAB-201ENST00000355836 PRDM2Q13029 1718 aa39.53■■■■□ 3.92
HNRNPAB-201ENST00000355836 THOC2Q8NI27 1593 aaKnown RBP39.51■■■■□ 3.92
HNRNPAB-201ENST00000355836 MRC2Q9UBG0 1479 aa39.49■■■■□ 3.91
HNRNPAB-201ENST00000355836 CUX2O14529 1486 aa39.43■■■■□ 3.9
HNRNPAB-201ENST00000355836 WDR62O43379 1518 aa39.29■■■■□ 3.88
HNRNPAB-201ENST00000355836 URB2Q14146 1524 aaKnown RBP39.25■■■■□ 3.87
HNRNPAB-201ENST00000355836 TOPBP1Q92547 1522 aa39.06■■■■□ 3.84
HNRNPAB-201ENST00000355836 ABCC8Q09428 1581 aa39.05■■■■□ 3.84
HNRNPAB-201ENST00000355836 DNMBPQ6XZF7 1577 aa39.02■■■■□ 3.84
HNRNPAB-201ENST00000355836 CUX1P39880 1505 aa38.86■■■■□ 3.81
HNRNPAB-201ENST00000355836 WRNQ14191 1432 aaPredicted RBP eCLIP38.77■■■■□ 3.8
HNRNPAB-201ENST00000355836 POLA1P09884 1462 aaPredicted RBP38.75■■■■□ 3.79
HNRNPAB-201ENST00000355836 IFT140Q96RY7 1462 aa38.75■■■■□ 3.79
HNRNPAB-201ENST00000355836 FGD5Q6ZNL6 1462 aa38.72■■■■□ 3.79
HNRNPAB-201ENST00000355836 SOGA1O94964 1423 aa38.65■■■■□ 3.78
HNRNPAB-201ENST00000355836 RAD54L2Q9Y4B4 1467 aa38.63■■■■□ 3.77
HNRNPAB-201ENST00000355836 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
HNRNPAB-201ENST00000355836 ZNF608Q9ULD9 1512 aaPredicted RBP38.58■■■■□ 3.77
HNRNPAB-201ENST00000355836 TOP2BQ02880 1626 aa38.57■■■■□ 3.77
HNRNPAB-201ENST00000355836 TARBP1Q13395 1621 aaKnown RBP38.56■■■■□ 3.76
HNRNPAB-201ENST00000355836 BIVM-ERCC5R4GMW8 1640 aa38.54■■■■□ 3.76
HNRNPAB-201ENST00000355836 AQRO60306 1485 aaKnown RBP eCLIP38.43■■■■□ 3.749e-7■■■■■ 28
HNRNPAB-201ENST00000355836 TDRD9Q8NDG6 1382 aaKnown RBP38.42■■■■□ 3.74
HNRNPAB-201ENST00000355836 EIF4G3O43432 1585 aaKnown RBP38.4■■■■□ 3.74
HNRNPAB-201ENST00000355836 ABCA10Q8WWZ4 1543 aa38.31■■■■□ 3.72
HNRNPAB-201ENST00000355836 WDR97A6NE52 1622 aa38.27■■■■□ 3.72
HNRNPAB-201ENST00000355836 GAPVD1Q14C86 1478 aa38.18■■■■□ 3.7
HNRNPAB-201ENST00000355836 TRIM41Q8WV44 630 aa38.13■■■■□ 3.69
HNRNPAB-201ENST00000355836 GRIN2BQ13224 1484 aa38.13■■■■□ 3.69
HNRNPAB-201ENST00000355836 ABCA5Q8WWZ7 1642 aa38.11■■■■□ 3.69
HNRNPAB-201ENST00000355836 SNAPC4Q5SXM2 1469 aa38.07■■■■□ 3.68
HNRNPAB-201ENST00000355836 FBLN2P98095 1184 aa38.05■■■■□ 3.68
HNRNPAB-201ENST00000355836 PBRM1Q86U86 1689 aa38.02■■■■□ 3.68
HNRNPAB-201ENST00000355836 MAGI1Q96QZ7 1491 aaPredicted RBP37.97■■■■□ 3.67
HNRNPAB-201ENST00000355836 OSCARQ8IYS5 282 aa37.96■■■■□ 3.67
HNRNPAB-201ENST00000355836 DNAJC5Q9H3Z4 198 aa37.96■■■■□ 3.67
HNRNPAB-201ENST00000355836 KIF27Q86VH2 1401 aa37.94■■■■□ 3.66
HNRNPAB-201ENST00000355836 CHMP7Q8WUX9 453 aaPredicted RBP37.92■■■■□ 3.66
HNRNPAB-201ENST00000355836 ERICH3Q5RHP9 1530 aa37.85■■■■□ 3.65
HNRNPAB-201ENST00000355836 CHD1O14646 1710 aa37.85■■■■□ 3.65
HNRNPAB-201ENST00000355836 SYNJ2O15056 1496 aa37.84■■■■□ 3.65
HNRNPAB-201ENST00000355836 CHIC1Q5VXU3 224 aa37.79■■■■□ 3.64
HNRNPAB-201ENST00000355836 ADAMTS12P58397 1594 aa37.75■■■■□ 3.63
HNRNPAB-201ENST00000355836 FHAD1B1AJZ9 1412 aa37.74■■■■□ 3.63
HNRNPAB-201ENST00000355836 IGF1RP08069 1367 aa37.72■■■■□ 3.63
HNRNPAB-201ENST00000355836 RUSC2Q8N2Y8 1516 aa37.68■■■■□ 3.62
HNRNPAB-201ENST00000355836 GRIN2AQ12879 1464 aa37.63■■■■□ 3.62
HNRNPAB-201ENST00000355836 CUL7Q14999 1698 aa37.55■■■■□ 3.6
HNRNPAB-201ENST00000355836 CARMIL1Q5VZK9 1371 aa37.55■■■■□ 3.6
HNRNPAB-201ENST00000355836 CLASP1Q7Z460 1538 aa37.42■■■■□ 3.58
HNRNPAB-201ENST00000355836 FAM9AQ8IZU1 332 aaPredicted RBP37.42■■■■□ 3.58
HNRNPAB-201ENST00000355836 NUP160Q12769 1436 aa37.42■■■■□ 3.58
HNRNPAB-201ENST00000355836 CEP170Q5SW79 1584 aa37.42■■■■□ 3.58
HNRNPAB-201ENST00000355836 EEA1Q15075 1411 aa37.35■■■■□ 3.57
HNRNPAB-201ENST00000355836 CSRNP3Q8WYN3 585 aa37.34■■■■□ 3.57
HNRNPAB-201ENST00000355836 RAPGEF2Q9Y4G8 1499 aa37.33■■■■□ 3.57
HNRNPAB-201ENST00000355836 ARHGEF11O15085 1522 aa37.27■■■■□ 3.56
HNRNPAB-201ENST00000355836 RIMBP3CA6NJZ7 1639 aa37.23■■■■□ 3.55
HNRNPAB-201ENST00000355836 RIMBP3BA6NNM3 1639 aa37.23■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms