RNA–Protein interactions for RNA: ENST00000504449.1

PCP4L1-201, Transcript of Purkinje cell protein 4 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCP4L1, Length 1,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1-201ENST00000504449 NISCHQ9Y2I1 1504 aa53.94■■■■■ 6.22
PCP4L1-201ENST00000504449 CCDC180Q9P1Z9 1646 aa47.76■■■■■ 5.24
PCP4L1-201ENST00000504449 ABCC9O60706 1549 aa46.53■■■■■ 5.04
PCP4L1-201ENST00000504449 DCAF8L2P0C7V8 631 aa45■■■■■ 4.79
PCP4L1-201ENST00000504449 ZCCHC6Q5VYS8 1495 aaKnown RBP44.98■■■■■ 4.79
PCP4L1-201ENST00000504449 NACADO15069 1562 aa44.84■■■■■ 4.77
PCP4L1-201ENST00000504449 RB1CC1Q8TDY2 1594 aa44.83■■■■■ 4.77
PCP4L1-201ENST00000504449 MYO15BQ96JP2 1530 aa44.66■■■■■ 4.74
PCP4L1-201ENST00000504449 DCAF1Q9Y4B6 1507 aa44.6■■■■■ 4.73
PCP4L1-201ENST00000504449 UNC13AQ9UPW8 1703 aa43.87■■■■■ 4.61
PCP4L1-201ENST00000504449 SCRIBQ14160 1630 aa43.67■■■■■ 4.58
PCP4L1-201ENST00000504449 PABPN1Q86U42 306 aaKnown RBP eCLIP43.56■■■■■ 4.56
PCP4L1-201ENST00000504449 BICRAQ9NZM4 1560 aa43.52■■■■■ 4.56
PCP4L1-201ENST00000504449 SHROOM4Q9ULL8 1493 aa42.97■■■■■ 4.47
PCP4L1-201ENST00000504449 DNAJC5BQ9UF47 199 aa42.51■■■■■ 4.4
PCP4L1-201ENST00000504449 EIF4G1Q04637 1599 aaKnown RBP42.32■■■■■ 4.37
PCP4L1-201ENST00000504449 CC2D2AQ9P2K1 1620 aa42.09■■■■■ 4.33
PCP4L1-201ENST00000504449 CECR2Q9BXF3 1484 aa42.04■■■■■ 4.32
PCP4L1-201ENST00000504449 SMARCA4P51532 1647 aa41.78■■■■■ 4.28
PCP4L1-201ENST00000504449 BAZ1AQ9NRL2 1556 aaPredicted RBP41.75■■■■■ 4.27
PCP4L1-201ENST00000504449 MROH2BQ7Z745 1585 aa41.6■■■■■ 4.25
PCP4L1-201ENST00000504449 ATAD2BQ9ULI0 1458 aa41.49■■■■■ 4.23
PCP4L1-201ENST00000504449 SMARCA2P51531 1590 aa41.41■■■■■ 4.22
PCP4L1-201ENST00000504449 NCAPD3P42695 1498 aa41.41■■■■■ 4.22
PCP4L1-201ENST00000504449 PEG3Q9GZU2 1588 aa41.35■■■■■ 4.21
PCP4L1-201ENST00000504449 RSF1Q96T23 1441 aaPredicted RBP41.23■■■■■ 4.19
PCP4L1-201ENST00000504449 HMGXB3Q12766 1538 aa41.2■■■■■ 4.19
PCP4L1-201ENST00000504449 WIZO95785 1651 aa41.17■■■■■ 4.18
PCP4L1-201ENST00000504449 BAZ1BQ9UIG0 1483 aaKnown RBP41.15■■■■■ 4.18
PCP4L1-201ENST00000504449 TOP2AP11388 1531 aaKnown RBP40.7■■■■■ 4.11
PCP4L1-201ENST00000504449 SUPT5HO00267 1087 aaKnown RBP40.45■■■■■ 4.07
PCP4L1-201ENST00000504449 NESP48681 1621 aa40.38■■■■■ 4.05
PCP4L1-201ENST00000504449 CCDC88BA6NC98 1476 aa40.27■■■■■ 4.04
PCP4L1-201ENST00000504449 LAMC3Q9Y6N6 1575 aa40.24■■■■■ 4.03
PCP4L1-201ENST00000504449 CADPSQ9ULU8 1353 aa40.22■■■■■ 4.03
PCP4L1-201ENST00000504449 CFTRP13569 1480 aa40.05■■■■■ 4
PCP4L1-201ENST00000504449 ERCC6Q03468 1493 aa40.04■■■■■ 4
PCP4L1-201ENST00000504449 PDS5BQ9NTI5 1447 aa39.96■■■■□ 3.99
PCP4L1-201ENST00000504449 KIF21AQ7Z4S6 1674 aa39.88■■■■□ 3.97
PCP4L1-201ENST00000504449 FANCD2Q9BXW9 1451 aa39.76■■■■□ 3.96
PCP4L1-201ENST00000504449 PRDM2Q13029 1718 aa39.73■■■■□ 3.95
PCP4L1-201ENST00000504449 CEP164Q9UPV0 1460 aa39.66■■■■□ 3.94
PCP4L1-201ENST00000504449 THOC2Q8NI27 1593 aaKnown RBP39.66■■■■□ 3.94
PCP4L1-201ENST00000504449 MRC2Q9UBG0 1479 aa39.54■■■■□ 3.92
PCP4L1-201ENST00000504449 CUX2O14529 1486 aa39.48■■■■□ 3.91
PCP4L1-201ENST00000504449 WDR62O43379 1518 aa39.42■■■■□ 3.9
PCP4L1-201ENST00000504449 URB2Q14146 1524 aaKnown RBP39.37■■■■□ 3.89
PCP4L1-201ENST00000504449 TOPBP1Q92547 1522 aa39.17■■■■□ 3.86
PCP4L1-201ENST00000504449 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
PCP4L1-201ENST00000504449 DNMBPQ6XZF7 1577 aa39.12■■■■□ 3.85
PCP4L1-201ENST00000504449 CUX1P39880 1505 aa39■■■■□ 3.83
PCP4L1-201ENST00000504449 POLA1P09884 1462 aaPredicted RBP38.86■■■■□ 3.81
PCP4L1-201ENST00000504449 WRNQ14191 1432 aaPredicted RBP eCLIP38.84■■■■□ 3.81
PCP4L1-201ENST00000504449 IFT140Q96RY7 1462 aa38.82■■■■□ 3.8
PCP4L1-201ENST00000504449 FGD5Q6ZNL6 1462 aa38.81■■■■□ 3.8
PCP4L1-201ENST00000504449 SYNJ1O43426 1573 aa38.76■■■■□ 3.8
PCP4L1-201ENST00000504449 RAD54L2Q9Y4B4 1467 aa38.73■■■■□ 3.79
PCP4L1-201ENST00000504449 TARBP1Q13395 1621 aaKnown RBP38.72■■■■□ 3.79
PCP4L1-201ENST00000504449 TOP2BQ02880 1626 aa38.72■■■■□ 3.79
PCP4L1-201ENST00000504449 SOGA1O94964 1423 aa38.71■■■■□ 3.79
PCP4L1-201ENST00000504449 BIVM-ERCC5R4GMW8 1640 aa38.7■■■■□ 3.79
PCP4L1-201ENST00000504449 ZNF608Q9ULD9 1512 aaPredicted RBP38.68■■■■□ 3.78
PCP4L1-201ENST00000504449 AQRO60306 1485 aaKnown RBP eCLIP38.5■■■■□ 3.75
PCP4L1-201ENST00000504449 EIF4G3O43432 1585 aaKnown RBP38.5■■■■□ 3.75
PCP4L1-201ENST00000504449 TDRD9Q8NDG6 1382 aaKnown RBP38.48■■■■□ 3.75
PCP4L1-201ENST00000504449 WDR97A6NE52 1622 aa38.46■■■■□ 3.75
PCP4L1-201ENST00000504449 ABCA10Q8WWZ4 1543 aa38.44■■■■□ 3.74
PCP4L1-201ENST00000504449 ABCA5Q8WWZ7 1642 aa38.25■■■■□ 3.71
PCP4L1-201ENST00000504449 GAPVD1Q14C86 1478 aa38.25■■■■□ 3.71
PCP4L1-201ENST00000504449 GRIN2BQ13224 1484 aa38.19■■■■□ 3.7
PCP4L1-201ENST00000504449 TRIM41Q8WV44 630 aa38.15■■■■□ 3.7
PCP4L1-201ENST00000504449 PBRM1Q86U86 1689 aa38.14■■■■□ 3.7
PCP4L1-201ENST00000504449 SNAPC4Q5SXM2 1469 aa38.12■■■■□ 3.69
PCP4L1-201ENST00000504449 MAGI1Q96QZ7 1491 aaPredicted RBP38.04■■■■□ 3.68
PCP4L1-201ENST00000504449 KIF27Q86VH2 1401 aa37.99■■■■□ 3.67
PCP4L1-201ENST00000504449 DNAJC5Q9H3Z4 198 aa37.98■■■■□ 3.67
PCP4L1-201ENST00000504449 FBLN2P98095 1184 aa37.97■■■■□ 3.67
PCP4L1-201ENST00000504449 ERICH3Q5RHP9 1530 aa37.96■■■■□ 3.67
PCP4L1-201ENST00000504449 CHD1O14646 1710 aa37.96■■■■□ 3.67
PCP4L1-201ENST00000504449 OSCARQ8IYS5 282 aa37.95■■■■□ 3.67
PCP4L1-201ENST00000504449 CHIC1Q5VXU3 224 aa37.92■■■■□ 3.66
PCP4L1-201ENST00000504449 SYNJ2O15056 1496 aa37.91■■■■□ 3.66
PCP4L1-201ENST00000504449 CHMP7Q8WUX9 453 aaPredicted RBP37.89■■■■□ 3.66
PCP4L1-201ENST00000504449 ADAMTS12P58397 1594 aa37.86■■■■□ 3.65
PCP4L1-201ENST00000504449 IGF1RP08069 1367 aa37.85■■■■□ 3.65
PCP4L1-201ENST00000504449 RUSC2Q8N2Y8 1516 aa37.83■■■■□ 3.65
PCP4L1-201ENST00000504449 FHAD1B1AJZ9 1412 aa37.81■■■■□ 3.64
PCP4L1-201ENST00000504449 GRIN2AQ12879 1464 aa37.71■■■■□ 3.63
PCP4L1-201ENST00000504449 CUL7Q14999 1698 aa37.66■■■■□ 3.62
PCP4L1-201ENST00000504449 CARMIL1Q5VZK9 1371 aa37.61■■■■□ 3.61
PCP4L1-201ENST00000504449 CLASP1Q7Z460 1538 aa37.55■■■■□ 3.6
PCP4L1-201ENST00000504449 CEP170Q5SW79 1584 aa37.53■■■■□ 3.6
PCP4L1-201ENST00000504449 NUP160Q12769 1436 aa37.53■■■■□ 3.6
PCP4L1-201ENST00000504449 EEA1Q15075 1411 aa37.43■■■■□ 3.58
PCP4L1-201ENST00000504449 CSRNP3Q8WYN3 585 aa37.41■■■■□ 3.58
PCP4L1-201ENST00000504449 RAPGEF2Q9Y4G8 1499 aa37.4■■■■□ 3.58
PCP4L1-201ENST00000504449 FAM9AQ8IZU1 332 aaPredicted RBP37.4■■■■□ 3.58
PCP4L1-201ENST00000504449 PRXQ9BXM0 1461 aa37.36■■■■□ 3.57
PCP4L1-201ENST00000504449 ARHGEF11O15085 1522 aa37.33■■■■□ 3.57
PCP4L1-201ENST00000504449 RIMBP3CA6NJZ7 1639 aa37.31■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms