RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 NISCHQ9Y2I1 1504 aa49.21■■■■■ 5.47
TOP1MT-201ENST00000329245 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
TOP1MT-201ENST00000329245 ZCCHC6Q5VYS8 1495 aaKnown RBP41.28■■■■■ 4.2
TOP1MT-201ENST00000329245 DCAF8L2P0C7V8 631 aa40.93■■■■■ 4.14
TOP1MT-201ENST00000329245 ABCC9O60706 1549 aa40.81■■■■■ 4.12
TOP1MT-201ENST00000329245 DCAF1Q9Y4B6 1507 aa40.63■■■■■ 4.09
TOP1MT-201ENST00000329245 SHROOM4Q9ULL8 1493 aa40.21■■■■■ 4.03
TOP1MT-201ENST00000329245 MYO15BQ96JP2 1530 aa40.19■■■■■ 4.02
TOP1MT-201ENST00000329245 NACADO15069 1562 aa40.03■■■■■ 4
TOP1MT-201ENST00000329245 RB1CC1Q8TDY2 1594 aa39.73■■■■□ 3.95
TOP1MT-201ENST00000329245 SCRIBQ14160 1630 aa39.52■■■■□ 3.92
TOP1MT-201ENST00000329245 UNC13AQ9UPW8 1703 aa38.84■■■■□ 3.81
TOP1MT-201ENST00000329245 SUPT5HO00267 1087 aaKnown RBP38.68■■■■□ 3.78
TOP1MT-201ENST00000329245 PABPN1Q86U42 306 aaKnown RBP eCLIP38.54■■■■□ 3.76
TOP1MT-201ENST00000329245 BICRAQ9NZM4 1560 aa38.49■■■■□ 3.75
TOP1MT-201ENST00000329245 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
TOP1MT-201ENST00000329245 RSF1Q96T23 1441 aaPredicted RBP38.16■■■■□ 3.7
TOP1MT-201ENST00000329245 MROH2BQ7Z745 1585 aa38.03■■■■□ 3.68
TOP1MT-201ENST00000329245 BAZ1AQ9NRL2 1556 aaPredicted RBP38.01■■■■□ 3.68
TOP1MT-201ENST00000329245 SMARCA4P51532 1647 aa37.83■■■■□ 3.65
TOP1MT-201ENST00000329245 WIZO95785 1651 aa37.71■■■■□ 3.63
TOP1MT-201ENST00000329245 EIF4G1Q04637 1599 aaKnown RBP37.38■■■■□ 3.57
TOP1MT-201ENST00000329245 PEG3Q9GZU2 1588 aa37.33■■■■□ 3.57
TOP1MT-201ENST00000329245 TOP2AP11388 1531 aaKnown RBP37.29■■■■□ 3.56
TOP1MT-201ENST00000329245 ATAD2BQ9ULI0 1458 aa37.28■■■■□ 3.56
TOP1MT-201ENST00000329245 SMARCA2P51531 1590 aa37.24■■■■□ 3.55
TOP1MT-201ENST00000329245 BAZ1BQ9UIG0 1483 aaKnown RBP37.09■■■■□ 3.53
TOP1MT-201ENST00000329245 NCAPD3P42695 1498 aa36.97■■■■□ 3.51
TOP1MT-201ENST00000329245 CCDC88BA6NC98 1476 aa36.96■■■■□ 3.51
TOP1MT-201ENST00000329245 CHIC1Q5VXU3 224 aa36.88■■■■□ 3.49
TOP1MT-201ENST00000329245 CC2D2AQ9P2K1 1620 aa36.87■■■■□ 3.49
TOP1MT-201ENST00000329245 HMGXB3Q12766 1538 aa36.86■■■■□ 3.49
TOP1MT-201ENST00000329245 TRIM41Q8WV44 630 aa36.36■■■■□ 3.41
TOP1MT-201ENST00000329245 ABCC8Q09428 1581 aa36.14■■■■□ 3.38
TOP1MT-201ENST00000329245 CFTRP13569 1480 aa36.12■■■■□ 3.37
TOP1MT-201ENST00000329245 DNAJC5BQ9UF47 199 aa36.12■■■■□ 3.37
TOP1MT-201ENST00000329245 CADPSQ9ULU8 1353 aa36.06■■■■□ 3.36
TOP1MT-201ENST00000329245 WRNQ14191 1432 aaPredicted RBP eCLIP35.95■■■■□ 3.34
TOP1MT-201ENST00000329245 PRDM2Q13029 1718 aa35.81■■■■□ 3.32
TOP1MT-201ENST00000329245 NESP48681 1621 aa35.77■■■■□ 3.32
TOP1MT-201ENST00000329245 SYNJ1O43426 1573 aa35.75■■■■□ 3.31
TOP1MT-201ENST00000329245 FAM9AQ8IZU1 332 aaPredicted RBP35.72■■■■□ 3.31
TOP1MT-201ENST00000329245 LAMC3Q9Y6N6 1575 aa35.71■■■■□ 3.31
TOP1MT-201ENST00000329245 FANCD2Q9BXW9 1451 aa35.65■■■■□ 3.3
TOP1MT-201ENST00000329245 TOP2BQ02880 1626 aa35.6■■■■□ 3.29
TOP1MT-201ENST00000329245 CUX1P39880 1505 aa35.55■■■■□ 3.28
TOP1MT-201ENST00000329245 BIVM-ERCC5R4GMW8 1640 aa35.53■■■■□ 3.28
TOP1MT-201ENST00000329245 LOC105371045A0A1W2PR82 267 aa35.53■■■■□ 3.28
TOP1MT-201ENST00000329245 PDS5BQ9NTI5 1447 aa35.51■■■■□ 3.28
TOP1MT-201ENST00000329245 SOGA1O94964 1423 aa35.48■■■■□ 3.27
TOP1MT-201ENST00000329245 CEP164Q9UPV0 1460 aa35.43■■■■□ 3.26
TOP1MT-201ENST00000329245 EEA1Q15075 1411 aa35.34■■■■□ 3.25
TOP1MT-201ENST00000329245 RUSC2Q8N2Y8 1516 aa35.34■■■■□ 3.25
TOP1MT-201ENST00000329245 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
TOP1MT-201ENST00000329245 EHMT2Q96KQ7 1210 aa35.27■■■■□ 3.24
TOP1MT-201ENST00000329245 DNMBPQ6XZF7 1577 aa35.26■■■■□ 3.24
TOP1MT-201ENST00000329245 CSRNP3Q8WYN3 585 aa35.25■■■■□ 3.23
TOP1MT-201ENST00000329245 TOPBP1Q92547 1522 aa35.23■■■■□ 3.23
TOP1MT-201ENST00000329245 FGD5Q6ZNL6 1462 aa35.21■■■■□ 3.23
TOP1MT-201ENST00000329245 URB2Q14146 1524 aaKnown RBP35.18■■■■□ 3.22
TOP1MT-201ENST00000329245 KIF27Q86VH2 1401 aa35.06■■■■□ 3.2
TOP1MT-201ENST00000329245 POLA1P09884 1462 aaPredicted RBP35.06■■■■□ 3.2
TOP1MT-201ENST00000329245 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
TOP1MT-201ENST00000329245 MRC2Q9UBG0 1479 aa35.02■■■■□ 3.2
TOP1MT-201ENST00000329245 CUX2O14529 1486 aa34.99■■■■□ 3.19
TOP1MT-201ENST00000329245 RAD54L2Q9Y4B4 1467 aa34.98■■■■□ 3.19
TOP1MT-201ENST00000329245 ABCA10Q8WWZ4 1543 aa34.87■■■■□ 3.17
TOP1MT-201ENST00000329245 GOLGA3Q08378 1498 aa34.87■■■■□ 3.17
TOP1MT-201ENST00000329245 UBTFP17480 764 aaKnown RBP34.85■■■■□ 3.17
TOP1MT-201ENST00000329245 KIF21BO75037 1637 aa34.84■■■■□ 3.17
TOP1MT-201ENST00000329245 WDR62O43379 1518 aa34.8■■■■□ 3.16
TOP1MT-201ENST00000329245 IGF1RP08069 1367 aa34.76■■■■□ 3.16
TOP1MT-201ENST00000329245 TNIKQ9UKE5 1360 aa34.74■■■■□ 3.15
TOP1MT-201ENST00000329245 PRXQ9BXM0 1461 aa34.74■■■■□ 3.15
TOP1MT-201ENST00000329245 RAPGEF2Q9Y4G8 1499 aa34.74■■■■□ 3.15
TOP1MT-201ENST00000329245 THOC2Q8NI27 1593 aaKnown RBP34.7■■■■□ 3.14
TOP1MT-201ENST00000329245 TDRD9Q8NDG6 1382 aaKnown RBP34.68■■■■□ 3.14
TOP1MT-201ENST00000329245 WDR97A6NE52 1622 aa34.68■■■■□ 3.14
TOP1MT-201ENST00000329245 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
TOP1MT-201ENST00000329245 ERICH3Q5RHP9 1530 aa34.64■■■■□ 3.14
TOP1MT-201ENST00000329245 CARMIL1Q5VZK9 1371 aa34.6■■■■□ 3.13
TOP1MT-201ENST00000329245 IFT140Q96RY7 1462 aa34.59■■■■□ 3.13
TOP1MT-201ENST00000329245 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
TOP1MT-201ENST00000329245 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
TOP1MT-201ENST00000329245 CEP162Q5TB80 1403 aa34.55■■■■□ 3.12
TOP1MT-201ENST00000329245 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.115e-15■■■■■ 69.3
TOP1MT-201ENST00000329245 CUL7Q14999 1698 aa34.42■■■■□ 3.1
TOP1MT-201ENST00000329245 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
TOP1MT-201ENST00000329245 RANGAP1P46060 587 aaPredicted RBP34.38■■■■□ 3.09
TOP1MT-201ENST00000329245 CLIP1P30622 1438 aa34.33■■■■□ 3.09
TOP1MT-201ENST00000329245 GRIN2BQ13224 1484 aa34.32■■■■□ 3.08
TOP1MT-201ENST00000329245 PBRM1Q86U86 1689 aa34.3■■■■□ 3.08
TOP1MT-201ENST00000329245 EIF4G3O43432 1585 aaKnown RBP34.24■■■■□ 3.07
TOP1MT-201ENST00000329245 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
TOP1MT-201ENST00000329245 ADAMTS12P58397 1594 aa34.13■■■■□ 3.05
TOP1MT-201ENST00000329245 SNAPC4Q5SXM2 1469 aa34.11■■■■□ 3.05
TOP1MT-201ENST00000329245 MAGI1Q96QZ7 1491 aaPredicted RBP34.01■■■■□ 3.04
TOP1MT-201ENST00000329245 CTTNBP2Q8WZ74 1663 aa34■■■■□ 3.03
TOP1MT-201ENST00000329245 VPS8Q8N3P4 1428 aa33.99■■■■□ 3.03
TOP1MT-201ENST00000329245 ARHGAP35Q9NRY4 1499 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms