Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
EFCC1Q9HA90 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
EFCC1Q9HA90 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
EFCC1Q9HA90 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
EFCC1Q9HA90 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
EFCC1Q9HA90 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
EFCC1Q9HA90 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
EFCC1Q9HA90 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
EFCC1Q9HA90 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
EFCC1Q9HA90 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.11■■□□□ 1.77
EFCC1Q9HA90 DUSP8P4-201ENST00000399538 1761 ntBASIC26.11■■□□□ 1.77
EFCC1Q9HA90 ABHD17AP1-201ENST00000358206 933 ntBASIC26.11■■□□□ 1.77
EFCC1Q9HA90 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.11■■□□□ 1.77
EFCC1Q9HA90 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
EFCC1Q9HA90 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
EFCC1Q9HA90 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.11■■□□□ 1.77
EFCC1Q9HA90 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
EFCC1Q9HA90 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 pRNA.6-201ENST00000610482 90 ntBASIC26.1■■□□□ 1.77
EFCC1Q9HA90 pRNA.5-201ENST00000612139 90 ntBASIC26.1■■□□□ 1.77
EFCC1Q9HA90 pRNA.11-201ENST00000618423 90 ntBASIC26.1■■□□□ 1.77
EFCC1Q9HA90 pRNA.13-201ENST00000619112 90 ntBASIC26.1■■□□□ 1.77
EFCC1Q9HA90 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.1■■□□□ 1.77
EFCC1Q9HA90 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 IGHV3-19-201ENST00000521488 291 ntBASIC26.09■■□□□ 1.77
EFCC1Q9HA90 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 AC080038.1-201ENST00000611274 1154 ntBASIC26.09■■□□□ 1.77
EFCC1Q9HA90 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
EFCC1Q9HA90 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
EFCC1Q9HA90 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
EFCC1Q9HA90 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
EFCC1Q9HA90 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
EFCC1Q9HA90 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.08■■□□□ 1.77
EFCC1Q9HA90 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.08■■□□□ 1.77
EFCC1Q9HA90 TERF1P2-201ENST00000583350 1212 ntBASIC26.08■■□□□ 1.77
EFCC1Q9HA90 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.08■■□□□ 1.77
EFCC1Q9HA90 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
EFCC1Q9HA90 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
EFCC1Q9HA90 LINC02228-203ENST00000641970 1355 ntBASIC26.06■■□□□ 1.76
EFCC1Q9HA90 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
EFCC1Q9HA90 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
EFCC1Q9HA90 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms