RNA–Protein interactions for RNA: ENST00000611537.1

VGF-203, Transcript of VGF nerve growth factor inducible, humanhuman

TSL 5 BASIC

Gene VGF, Length 1,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGF-203ENST00000611537 NISCHQ9Y2I1 1504 aa53.75■■■■■ 6.2
VGF-203ENST00000611537 CCDC180Q9P1Z9 1646 aa47.54■■■■■ 5.2
VGF-203ENST00000611537 ABCC9O60706 1549 aa46.14■■■■■ 4.98
VGF-203ENST00000611537 ZCCHC6Q5VYS8 1495 aaKnown RBP44.86■■■■■ 4.77
VGF-203ENST00000611537 DCAF8L2P0C7V8 631 aa44.72■■■■■ 4.75
VGF-203ENST00000611537 NACADO15069 1562 aa44.64■■■■■ 4.74
VGF-203ENST00000611537 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
VGF-203ENST00000611537 MYO15BQ96JP2 1530 aa44.55■■■■■ 4.72
VGF-203ENST00000611537 DCAF1Q9Y4B6 1507 aa44.51■■■■■ 4.72
VGF-203ENST00000611537 UNC13AQ9UPW8 1703 aa43.52■■■■■ 4.56
VGF-203ENST00000611537 SCRIBQ14160 1630 aa43.42■■■■■ 4.54
VGF-203ENST00000611537 PABPN1Q86U42 306 aaKnown RBP eCLIP43.22■■■■■ 4.51
VGF-203ENST00000611537 BICRAQ9NZM4 1560 aa43.22■■■■■ 4.51
VGF-203ENST00000611537 SHROOM4Q9ULL8 1493 aa42.82■■■■■ 4.44
VGF-203ENST00000611537 EIF4G1Q04637 1599 aaKnown RBP42.04■■■■■ 4.32
VGF-203ENST00000611537 DNAJC5BQ9UF47 199 aa42.02■■■■■ 4.32
VGF-203ENST00000611537 CECR2Q9BXF3 1484 aa41.83■■■■■ 4.29
VGF-203ENST00000611537 CC2D2AQ9P2K1 1620 aa41.75■■■■■ 4.27
VGF-203ENST00000611537 BAZ1AQ9NRL2 1556 aaPredicted RBP41.62■■■■■ 4.25
VGF-203ENST00000611537 SMARCA4P51532 1647 aa41.59■■■■■ 4.25
VGF-203ENST00000611537 MROH2BQ7Z745 1585 aa41.43■■■■■ 4.22
VGF-203ENST00000611537 ATAD2BQ9ULI0 1458 aa41.29■■■■■ 4.2
VGF-203ENST00000611537 SMARCA2P51531 1590 aa41.24■■■■■ 4.19
VGF-203ENST00000611537 NCAPD3P42695 1498 aa41.22■■■■■ 4.19
VGF-203ENST00000611537 PEG3Q9GZU2 1588 aa41.2■■■■■ 4.19
VGF-203ENST00000611537 RSF1Q96T23 1441 aaPredicted RBP41.14■■■■■ 4.18
VGF-203ENST00000611537 HMGXB3Q12766 1538 aa41.03■■■■■ 4.16
VGF-203ENST00000611537 WIZO95785 1651 aa40.97■■■■■ 4.15
VGF-203ENST00000611537 BAZ1BQ9UIG0 1483 aaKnown RBP40.96■■■■■ 4.15
VGF-203ENST00000611537 TOP2AP11388 1531 aaKnown RBP40.57■■■■■ 4.09
VGF-203ENST00000611537 SUPT5HO00267 1087 aaKnown RBP40.39■■■■■ 4.06
VGF-203ENST00000611537 CCDC88BA6NC98 1476 aa40.12■■■■■ 4.01
VGF-203ENST00000611537 NESP48681 1621 aa40.06■■■■■ 4
VGF-203ENST00000611537 CADPSQ9ULU8 1353 aa40.04■■■■■ 4
VGF-203ENST00000611537 LAMC3Q9Y6N6 1575 aa40.02■■■■■ 4
VGF-203ENST00000611537 CFTRP13569 1480 aa39.89■■■■□ 3.98
VGF-203ENST00000611537 PDS5BQ9NTI5 1447 aa39.76■■■■□ 3.96
VGF-203ENST00000611537 ERCC6Q03468 1493 aa39.73■■■■□ 3.95
VGF-203ENST00000611537 FANCD2Q9BXW9 1451 aa39.55■■■■□ 3.92
VGF-203ENST00000611537 KIF21AQ7Z4S6 1674 aa39.55■■■■□ 3.92
VGF-203ENST00000611537 PRDM2Q13029 1718 aa39.52■■■■□ 3.92
VGF-203ENST00000611537 CEP164Q9UPV0 1460 aa39.45■■■■□ 3.91
VGF-203ENST00000611537 THOC2Q8NI27 1593 aaKnown RBP39.34■■■■□ 3.89
VGF-203ENST00000611537 MRC2Q9UBG0 1479 aa39.31■■■■□ 3.88
VGF-203ENST00000611537 CUX2O14529 1486 aa39.17■■■■□ 3.86
VGF-203ENST00000611537 WDR62O43379 1518 aa39.17■■■■□ 3.86
VGF-203ENST00000611537 URB2Q14146 1524 aaKnown RBP39.14■■■■□ 3.86
VGF-203ENST00000611537 ABCC8Q09428 1581 aa39■■■■□ 3.83
VGF-203ENST00000611537 TOPBP1Q92547 1522 aa38.97■■■■□ 3.83
VGF-203ENST00000611537 DNMBPQ6XZF7 1577 aa38.95■■■■□ 3.83
VGF-203ENST00000611537 CUX1P39880 1505 aa38.84■■■■□ 3.81
VGF-203ENST00000611537 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
VGF-203ENST00000611537 POLA1P09884 1462 aaPredicted RBP38.67■■■■□ 3.78
VGF-203ENST00000611537 FGD5Q6ZNL6 1462 aa38.63■■■■□ 3.77
VGF-203ENST00000611537 IFT140Q96RY7 1462 aa38.62■■■■□ 3.77
VGF-203ENST00000611537 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
VGF-203ENST00000611537 TOP2BQ02880 1626 aa38.61■■■■□ 3.77
VGF-203ENST00000611537 BIVM-ERCC5R4GMW8 1640 aa38.57■■■■□ 3.77
VGF-203ENST00000611537 SOGA1O94964 1423 aa38.53■■■■□ 3.76
VGF-203ENST00000611537 TARBP1Q13395 1621 aaKnown RBP38.5■■■■□ 3.75
VGF-203ENST00000611537 RAD54L2Q9Y4B4 1467 aa38.5■■■■□ 3.75
VGF-203ENST00000611537 ZNF608Q9ULD9 1512 aaPredicted RBP38.41■■■■□ 3.74
VGF-203ENST00000611537 ABCA10Q8WWZ4 1543 aa38.3■■■■□ 3.72
VGF-203ENST00000611537 TDRD9Q8NDG6 1382 aaKnown RBP38.27■■■■□ 3.72
VGF-203ENST00000611537 AQRO60306 1485 aaKnown RBP eCLIP38.26■■■■□ 3.72
VGF-203ENST00000611537 WDR97A6NE52 1622 aa38.25■■■■□ 3.71
VGF-203ENST00000611537 EIF4G3O43432 1585 aaKnown RBP38.24■■■■□ 3.71
VGF-203ENST00000611537 TRIM41Q8WV44 630 aa38.14■■■■□ 3.7
VGF-203ENST00000611537 GAPVD1Q14C86 1478 aa38.09■■■■□ 3.69
VGF-203ENST00000611537 ABCA5Q8WWZ7 1642 aa38.07■■■■□ 3.68
VGF-203ENST00000611537 GRIN2BQ13224 1484 aa38.02■■■■□ 3.68
VGF-203ENST00000611537 CHIC1Q5VXU3 224 aa37.98■■■■□ 3.67
VGF-203ENST00000611537 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
VGF-203ENST00000611537 PBRM1Q86U86 1689 aa37.91■■■■□ 3.66
VGF-203ENST00000611537 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
VGF-203ENST00000611537 MAGI1Q96QZ7 1491 aaPredicted RBP37.88■■■■□ 3.65
VGF-203ENST00000611537 ERICH3Q5RHP9 1530 aa37.84■■■■□ 3.65
VGF-203ENST00000611537 IGF1RP08069 1367 aa37.74■■■■□ 3.63
VGF-203ENST00000611537 SYNJ2O15056 1496 aa37.72■■■■□ 3.63
VGF-203ENST00000611537 FBLN2P98095 1184 aa37.7■■■■□ 3.63
VGF-203ENST00000611537 RUSC2Q8N2Y8 1516 aa37.7■■■■□ 3.63
VGF-203ENST00000611537 CHMP7Q8WUX9 453 aaPredicted RBP37.69■■■■□ 3.62
VGF-203ENST00000611537 ADAMTS12P58397 1594 aa37.67■■■■□ 3.62
VGF-203ENST00000611537 FHAD1B1AJZ9 1412 aa37.67■■■■□ 3.62
VGF-203ENST00000611537 OSCARQ8IYS5 282 aa37.66■■■■□ 3.62
VGF-203ENST00000611537 CHD1O14646 1710 aa37.65■■■■□ 3.62
VGF-203ENST00000611537 CUL7Q14999 1698 aa37.54■■■■□ 3.6
VGF-203ENST00000611537 GRIN2AQ12879 1464 aa37.53■■■■□ 3.6
VGF-203ENST00000611537 DNAJC5Q9H3Z4 198 aa37.51■■■■□ 3.6
VGF-203ENST00000611537 CARMIL1Q5VZK9 1371 aa37.51■■■■□ 3.59
VGF-203ENST00000611537 EEA1Q15075 1411 aa37.47■■■■□ 3.59
VGF-203ENST00000611537 CSRNP3Q8WYN3 585 aa37.38■■■■□ 3.57
VGF-203ENST00000611537 NUP160Q12769 1436 aa37.37■■■■□ 3.57
VGF-203ENST00000611537 FAM9AQ8IZU1 332 aaPredicted RBP37.32■■■■□ 3.56
VGF-203ENST00000611537 PRXQ9BXM0 1461 aa37.32■■■■□ 3.56
VGF-203ENST00000611537 RAPGEF2Q9Y4G8 1499 aa37.32■■■■□ 3.56
VGF-203ENST00000611537 CEP170Q5SW79 1584 aa37.31■■■■□ 3.56
VGF-203ENST00000611537 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
VGF-203ENST00000611537 KIAA0586Q9BVV6 1533 aa37.11■■■■□ 3.53
VGF-203ENST00000611537 KIF21BO75037 1637 aa37.02■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms