RNA–Protein interactions for RNA: ENST00000611537.1

VGF-203, Transcript of VGF nerve growth factor inducible, humanhuman

TSL 5 BASIC

Gene VGF, Length 1,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGF-203ENST00000611537 NISCHQ9Y2I1 1504 aa53.75■■■■■ 6.2
VGF-203ENST00000611537 CCDC180Q9P1Z9 1646 aa47.54■■■■■ 5.2
VGF-203ENST00000611537 ABCC9O60706 1549 aa46.14■■■■■ 4.98
VGF-203ENST00000611537 ZCCHC6Q5VYS8 1495 aaKnown RBP44.86■■■■■ 4.77
VGF-203ENST00000611537 DCAF8L2P0C7V8 631 aa44.72■■■■■ 4.75
VGF-203ENST00000611537 NACADO15069 1562 aa44.64■■■■■ 4.74
VGF-203ENST00000611537 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
VGF-203ENST00000611537 MYO15BQ96JP2 1530 aa44.55■■■■■ 4.72
VGF-203ENST00000611537 DCAF1Q9Y4B6 1507 aa44.51■■■■■ 4.72
VGF-203ENST00000611537 UNC13AQ9UPW8 1703 aa43.52■■■■■ 4.56
VGF-203ENST00000611537 SCRIBQ14160 1630 aa43.42■■■■■ 4.54
VGF-203ENST00000611537 PABPN1Q86U42 306 aaKnown RBP eCLIP43.22■■■■■ 4.51
VGF-203ENST00000611537 BICRAQ9NZM4 1560 aa43.22■■■■■ 4.51
VGF-203ENST00000611537 SHROOM4Q9ULL8 1493 aa42.82■■■■■ 4.44
VGF-203ENST00000611537 EIF4G1Q04637 1599 aaKnown RBP42.04■■■■■ 4.32
VGF-203ENST00000611537 DNAJC5BQ9UF47 199 aa42.02■■■■■ 4.32
VGF-203ENST00000611537 CECR2Q9BXF3 1484 aa41.83■■■■■ 4.29
VGF-203ENST00000611537 CC2D2AQ9P2K1 1620 aa41.75■■■■■ 4.27
VGF-203ENST00000611537 BAZ1AQ9NRL2 1556 aaPredicted RBP41.62■■■■■ 4.25
VGF-203ENST00000611537 SMARCA4P51532 1647 aa41.59■■■■■ 4.25
VGF-203ENST00000611537 MROH2BQ7Z745 1585 aa41.43■■■■■ 4.22
VGF-203ENST00000611537 ATAD2BQ9ULI0 1458 aa41.29■■■■■ 4.2
VGF-203ENST00000611537 SMARCA2P51531 1590 aa41.24■■■■■ 4.19
VGF-203ENST00000611537 NCAPD3P42695 1498 aa41.22■■■■■ 4.19
VGF-203ENST00000611537 PEG3Q9GZU2 1588 aa41.2■■■■■ 4.19
VGF-203ENST00000611537 RSF1Q96T23 1441 aaPredicted RBP41.14■■■■■ 4.18
VGF-203ENST00000611537 HMGXB3Q12766 1538 aa41.03■■■■■ 4.16
VGF-203ENST00000611537 WIZO95785 1651 aa40.97■■■■■ 4.15
VGF-203ENST00000611537 BAZ1BQ9UIG0 1483 aaKnown RBP40.96■■■■■ 4.15
VGF-203ENST00000611537 TOP2AP11388 1531 aaKnown RBP40.57■■■■■ 4.09
VGF-203ENST00000611537 SUPT5HO00267 1087 aaKnown RBP40.39■■■■■ 4.06
VGF-203ENST00000611537 CCDC88BA6NC98 1476 aa40.12■■■■■ 4.01
VGF-203ENST00000611537 NESP48681 1621 aa40.06■■■■■ 4
VGF-203ENST00000611537 CADPSQ9ULU8 1353 aa40.04■■■■■ 4
VGF-203ENST00000611537 LAMC3Q9Y6N6 1575 aa40.02■■■■■ 4
VGF-203ENST00000611537 CFTRP13569 1480 aa39.89■■■■□ 3.98
VGF-203ENST00000611537 PDS5BQ9NTI5 1447 aa39.76■■■■□ 3.96
VGF-203ENST00000611537 ERCC6Q03468 1493 aa39.73■■■■□ 3.95
VGF-203ENST00000611537 FANCD2Q9BXW9 1451 aa39.55■■■■□ 3.92
VGF-203ENST00000611537 KIF21AQ7Z4S6 1674 aa39.55■■■■□ 3.92
VGF-203ENST00000611537 PRDM2Q13029 1718 aa39.52■■■■□ 3.92
VGF-203ENST00000611537 CEP164Q9UPV0 1460 aa39.45■■■■□ 3.91
VGF-203ENST00000611537 THOC2Q8NI27 1593 aaKnown RBP39.34■■■■□ 3.89
VGF-203ENST00000611537 MRC2Q9UBG0 1479 aa39.31■■■■□ 3.88
VGF-203ENST00000611537 CUX2O14529 1486 aa39.17■■■■□ 3.86
VGF-203ENST00000611537 WDR62O43379 1518 aa39.17■■■■□ 3.86
VGF-203ENST00000611537 URB2Q14146 1524 aaKnown RBP39.14■■■■□ 3.86
VGF-203ENST00000611537 ABCC8Q09428 1581 aa39■■■■□ 3.83
VGF-203ENST00000611537 TOPBP1Q92547 1522 aa38.97■■■■□ 3.83
VGF-203ENST00000611537 DNMBPQ6XZF7 1577 aa38.95■■■■□ 3.83
VGF-203ENST00000611537 CUX1P39880 1505 aa38.84■■■■□ 3.81
VGF-203ENST00000611537 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
VGF-203ENST00000611537 POLA1P09884 1462 aaPredicted RBP38.67■■■■□ 3.78
VGF-203ENST00000611537 FGD5Q6ZNL6 1462 aa38.63■■■■□ 3.77
VGF-203ENST00000611537 IFT140Q96RY7 1462 aa38.62■■■■□ 3.77
VGF-203ENST00000611537 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
VGF-203ENST00000611537 TOP2BQ02880 1626 aa38.61■■■■□ 3.77
VGF-203ENST00000611537 BIVM-ERCC5R4GMW8 1640 aa38.57■■■■□ 3.77
VGF-203ENST00000611537 SOGA1O94964 1423 aa38.53■■■■□ 3.76
VGF-203ENST00000611537 TARBP1Q13395 1621 aaKnown RBP38.5■■■■□ 3.75
VGF-203ENST00000611537 RAD54L2Q9Y4B4 1467 aa38.5■■■■□ 3.75
VGF-203ENST00000611537 ZNF608Q9ULD9 1512 aaPredicted RBP38.41■■■■□ 3.74
VGF-203ENST00000611537 ABCA10Q8WWZ4 1543 aa38.3■■■■□ 3.72
VGF-203ENST00000611537 TDRD9Q8NDG6 1382 aaKnown RBP38.27■■■■□ 3.72
VGF-203ENST00000611537 AQRO60306 1485 aaKnown RBP eCLIP38.26■■■■□ 3.72
VGF-203ENST00000611537 WDR97A6NE52 1622 aa38.25■■■■□ 3.71
VGF-203ENST00000611537 EIF4G3O43432 1585 aaKnown RBP38.24■■■■□ 3.71
VGF-203ENST00000611537 TRIM41Q8WV44 630 aa38.14■■■■□ 3.7
VGF-203ENST00000611537 GAPVD1Q14C86 1478 aa38.09■■■■□ 3.69
VGF-203ENST00000611537 ABCA5Q8WWZ7 1642 aa38.07■■■■□ 3.68
VGF-203ENST00000611537 GRIN2BQ13224 1484 aa38.02■■■■□ 3.68
VGF-203ENST00000611537 CHIC1Q5VXU3 224 aa37.98■■■■□ 3.67
VGF-203ENST00000611537 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
VGF-203ENST00000611537 PBRM1Q86U86 1689 aa37.91■■■■□ 3.66
VGF-203ENST00000611537 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
VGF-203ENST00000611537 MAGI1Q96QZ7 1491 aaPredicted RBP37.88■■■■□ 3.65
VGF-203ENST00000611537 ERICH3Q5RHP9 1530 aa37.84■■■■□ 3.65
VGF-203ENST00000611537 IGF1RP08069 1367 aa37.74■■■■□ 3.63
VGF-203ENST00000611537 SYNJ2O15056 1496 aa37.72■■■■□ 3.63
VGF-203ENST00000611537 FBLN2P98095 1184 aa37.7■■■■□ 3.63
VGF-203ENST00000611537 RUSC2Q8N2Y8 1516 aa37.7■■■■□ 3.63
VGF-203ENST00000611537 CHMP7Q8WUX9 453 aaPredicted RBP37.69■■■■□ 3.62
VGF-203ENST00000611537 ADAMTS12P58397 1594 aa37.67■■■■□ 3.62
VGF-203ENST00000611537 FHAD1B1AJZ9 1412 aa37.67■■■■□ 3.62
VGF-203ENST00000611537 OSCARQ8IYS5 282 aa37.66■■■■□ 3.62
VGF-203ENST00000611537 CHD1O14646 1710 aa37.65■■■■□ 3.62
VGF-203ENST00000611537 CUL7Q14999 1698 aa37.54■■■■□ 3.6
VGF-203ENST00000611537 GRIN2AQ12879 1464 aa37.53■■■■□ 3.6
VGF-203ENST00000611537 DNAJC5Q9H3Z4 198 aa37.51■■■■□ 3.6
VGF-203ENST00000611537 CARMIL1Q5VZK9 1371 aa37.51■■■■□ 3.59
VGF-203ENST00000611537 EEA1Q15075 1411 aa37.47■■■■□ 3.59
VGF-203ENST00000611537 CSRNP3Q8WYN3 585 aa37.38■■■■□ 3.57
VGF-203ENST00000611537 NUP160Q12769 1436 aa37.37■■■■□ 3.57
VGF-203ENST00000611537 FAM9AQ8IZU1 332 aaPredicted RBP37.32■■■■□ 3.56
VGF-203ENST00000611537 PRXQ9BXM0 1461 aa37.32■■■■□ 3.56
VGF-203ENST00000611537 RAPGEF2Q9Y4G8 1499 aa37.32■■■■□ 3.56
VGF-203ENST00000611537 CEP170Q5SW79 1584 aa37.31■■■■□ 3.56
VGF-203ENST00000611537 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
VGF-203ENST00000611537 KIAA0586Q9BVV6 1533 aa37.11■■■■□ 3.53
VGF-203ENST00000611537 KIF21BO75037 1637 aa37.02■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms