Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC142472.1-201ENST00000612013 1741 ntBASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 pRNA.6-201ENST00000610482 90 ntBASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 pRNA.5-201ENST00000612139 90 ntBASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 pRNA.11-201ENST00000618423 90 ntBASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 pRNA.13-201ENST00000619112 90 ntBASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSMD1Q96PZ7 GPX1P1-201ENST00000388829 606 ntBASIC19.27■□□□□ 0.67
CSMD1Q96PZ7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CSMD1Q96PZ7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 TPRG1LP1-201ENST00000598702 760 ntBASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 AL050303.2-201ENST00000619798 666 ntBASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 AP004607.4-201ENST00000530158 1459 ntBASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.26■□□□□ 0.67
CSMD1Q96PZ7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 AC004854.2-201ENST00000608450 1441 ntBASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSMD1Q96PZ7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD1Q96PZ7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 AC142086.6-201ENST00000621154 1765 ntBASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.23■□□□□ 0.67
CSMD1Q96PZ7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 AC098934.4-201ENST00000564127 592 ntBASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 AL596275.1-201ENST00000423464 877 ntBASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.22■□□□□ 0.67
CSMD1Q96PZ7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD1Q96PZ7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD1Q96PZ7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.21■□□□□ 0.67
CSMD1Q96PZ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CSMD1Q96PZ7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD1Q96PZ7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CSMD1Q96PZ7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.21■□□□□ 0.67
CSMD1Q96PZ7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.21■□□□□ 0.66
CSMD1Q96PZ7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
CSMD1Q96PZ7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.21■□□□□ 0.66
CSMD1Q96PZ7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.21■□□□□ 0.66
CSMD1Q96PZ7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD1Q96PZ7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.2■□□□□ 0.66
CSMD1Q96PZ7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.2■□□□□ 0.66
CSMD1Q96PZ7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD1Q96PZ7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD1Q96PZ7 SLC7A5P2-201ENST00000553010 536 ntBASIC19.2■□□□□ 0.66
CSMD1Q96PZ7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.2■□□□□ 0.66
CSMD1Q96PZ7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 AC011767.1-201ENST00000617410 1153 ntBASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms