RNA–Protein interactions for RNA: ENST00000261210.9

TMPO-201, Transcript of thymopoietin, humanhuman

TSL 1 (best) BASIC

Gene TMPO, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-201ENST00000261210 NISCHQ9Y2I1 1504 aa51.49■■■■■ 5.83
TMPO-201ENST00000261210 CCDC180Q9P1Z9 1646 aa46.09■■■■■ 4.97
TMPO-201ENST00000261210 ABCC9O60706 1549 aa45.82■■■■■ 4.92
TMPO-201ENST00000261210 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
TMPO-201ENST00000261210 NACADO15069 1562 aa43.46■■■■■ 4.55
TMPO-201ENST00000261210 DCAF8L2P0C7V8 631 aa43.29■■■■■ 4.52
TMPO-201ENST00000261210 MYO15BQ96JP2 1530 aa42.93■■■■■ 4.46
TMPO-201ENST00000261210 UNC13AQ9UPW8 1703 aa42.83■■■■■ 4.45
TMPO-201ENST00000261210 ZCCHC6Q5VYS8 1495 aaKnown RBP42.76■■■■■ 4.44
TMPO-201ENST00000261210 DNAJC5BQ9UF47 199 aa42.71■■■■■ 4.43
TMPO-201ENST00000261210 PABPN1Q86U42 306 aaKnown RBP eCLIP42.68■■■■■ 4.42
TMPO-201ENST00000261210 DCAF1Q9Y4B6 1507 aa42.51■■■■■ 4.4
TMPO-201ENST00000261210 BICRAQ9NZM4 1560 aa42.48■■■■■ 4.39
TMPO-201ENST00000261210 SCRIBQ14160 1630 aa42.06■■■■■ 4.32
TMPO-201ENST00000261210 SHROOM4Q9ULL8 1493 aa41.83■■■■■ 4.29
TMPO-201ENST00000261210 CC2D2AQ9P2K1 1620 aa41.41■■■■■ 4.22
TMPO-201ENST00000261210 EIF4G1Q04637 1599 aaKnown RBP41.39■■■■■ 4.22
TMPO-201ENST00000261210 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
TMPO-201ENST00000261210 SMARCA4P51532 1647 aa40.13■■■■■ 4.02
TMPO-201ENST00000261210 NCAPD3P42695 1498 aa40.11■■■■■ 4.01
TMPO-201ENST00000261210 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4
TMPO-201ENST00000261210 SMARCA2P51531 1590 aa39.95■■■■□ 3.99
TMPO-201ENST00000261210 BAZ1AQ9NRL2 1556 aaPredicted RBP39.93■■■■□ 3.98
TMPO-201ENST00000261210 HMGXB3Q12766 1538 aa39.87■■■■□ 3.97
TMPO-201ENST00000261210 MROH2BQ7Z745 1585 aa39.72■■■■□ 3.95
TMPO-201ENST00000261210 PEG3Q9GZU2 1588 aa39.72■■■■□ 3.95
TMPO-201ENST00000261210 BAZ1BQ9UIG0 1483 aaKnown RBP39.69■■■■□ 3.94
TMPO-201ENST00000261210 ERCC6Q03468 1493 aa39.49■■■■□ 3.91
TMPO-201ENST00000261210 NESP48681 1621 aa39.47■■■■□ 3.91
TMPO-201ENST00000261210 CUX2O14529 1486 aa39.3■■■■□ 3.88
TMPO-201ENST00000261210 WIZO95785 1651 aa39.28■■■■□ 3.88
TMPO-201ENST00000261210 LAMC3Q9Y6N6 1575 aa39.18■■■■□ 3.86
TMPO-201ENST00000261210 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
TMPO-201ENST00000261210 KIF21AQ7Z4S6 1674 aa39■■■■□ 3.83
TMPO-201ENST00000261210 RSF1Q96T23 1441 aaPredicted RBP38.97■■■■□ 3.83
TMPO-201ENST00000261210 DNAJC5Q9H3Z4 198 aa38.92■■■■□ 3.82
TMPO-201ENST00000261210 PDS5BQ9NTI5 1447 aa38.9■■■■□ 3.82
TMPO-201ENST00000261210 CADPSQ9ULU8 1353 aa38.9■■■■□ 3.82
TMPO-201ENST00000261210 TOP2AP11388 1531 aaKnown RBP38.76■■■■□ 3.8
TMPO-201ENST00000261210 MRC2Q9UBG0 1479 aa38.6■■■■□ 3.77
TMPO-201ENST00000261210 CFTRP13569 1480 aa38.54■■■■□ 3.76
TMPO-201ENST00000261210 WDR62O43379 1518 aa38.52■■■■□ 3.76
TMPO-201ENST00000261210 CEP164Q9UPV0 1460 aa38.51■■■■□ 3.76
TMPO-201ENST00000261210 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
TMPO-201ENST00000261210 CCDC88BA6NC98 1476 aa38.31■■■■□ 3.72
TMPO-201ENST00000261210 PRDM2Q13029 1718 aa38.26■■■■□ 3.71
TMPO-201ENST00000261210 URB2Q14146 1524 aaKnown RBP38.2■■■■□ 3.71
TMPO-201ENST00000261210 TOPBP1Q92547 1522 aa37.82■■■■□ 3.64
TMPO-201ENST00000261210 DNMBPQ6XZF7 1577 aa37.71■■■■□ 3.63
TMPO-201ENST00000261210 IFT140Q96RY7 1462 aa37.7■■■■□ 3.63
TMPO-201ENST00000261210 ZNF608Q9ULD9 1512 aaPredicted RBP37.68■■■■□ 3.62
TMPO-201ENST00000261210 ABCC8Q09428 1581 aa37.67■■■■□ 3.62
TMPO-201ENST00000261210 OSCARQ8IYS5 282 aa37.51■■■■□ 3.6
TMPO-201ENST00000261210 EIF4G3O43432 1585 aaKnown RBP37.5■■■■□ 3.59
TMPO-201ENST00000261210 TARBP1Q13395 1621 aaKnown RBP37.48■■■■□ 3.59
TMPO-201ENST00000261210 SUPT5HO00267 1087 aaKnown RBP37.46■■■■□ 3.59
TMPO-201ENST00000261210 POLA1P09884 1462 aaPredicted RBP37.45■■■■□ 3.59
TMPO-201ENST00000261210 TRIM41Q8WV44 630 aa37.39■■■■□ 3.58
TMPO-201ENST00000261210 AQRO60306 1485 aaKnown RBP eCLIP37.35■■■■□ 3.574e-6■□□□□ 10.8
TMPO-201ENST00000261210 RAD54L2Q9Y4B4 1467 aa37.33■■■■□ 3.57
TMPO-201ENST00000261210 CUX1P39880 1505 aa37.3■■■■□ 3.56
TMPO-201ENST00000261210 FGD5Q6ZNL6 1462 aa37.26■■■■□ 3.56
TMPO-201ENST00000261210 SOGA1O94964 1423 aa37.24■■■■□ 3.55
TMPO-201ENST00000261210 CHD1O14646 1710 aa37.19■■■■□ 3.54
TMPO-201ENST00000261210 TDRD9Q8NDG6 1382 aaKnown RBP37.16■■■■□ 3.54
TMPO-201ENST00000261210 RIMBP3CA6NJZ7 1639 aa37.1■■■■□ 3.53
TMPO-201ENST00000261210 RIMBP3BA6NNM3 1639 aa37.1■■■■□ 3.53
TMPO-201ENST00000261210 RIMBP3Q9UFD9 1639 aa37.1■■■■□ 3.53
TMPO-201ENST00000261210 WDR97A6NE52 1622 aa37.05■■■■□ 3.52
TMPO-201ENST00000261210 ARHGEF11O15085 1522 aa37■■■■□ 3.51
TMPO-201ENST00000261210 FBLN2P98095 1184 aa37■■■■□ 3.51
TMPO-201ENST00000261210 SNAPC4Q5SXM2 1469 aa36.99■■■■□ 3.51
TMPO-201ENST00000261210 GRIN2BQ13224 1484 aa36.89■■■■□ 3.5
TMPO-201ENST00000261210 MAGI1Q96QZ7 1491 aaPredicted RBP36.86■■■■□ 3.49
TMPO-201ENST00000261210 PBRM1Q86U86 1689 aa36.86■■■■□ 3.49
TMPO-201ENST00000261210 ABCA10Q8WWZ4 1543 aa36.84■■■■□ 3.49
TMPO-201ENST00000261210 GAPVD1Q14C86 1478 aa36.82■■■■□ 3.48
TMPO-201ENST00000261210 ABCA5Q8WWZ7 1642 aa36.8■■■■□ 3.48
TMPO-201ENST00000261210 BIVM-ERCC5R4GMW8 1640 aa36.78■■■■□ 3.48
TMPO-201ENST00000261210 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
TMPO-201ENST00000261210 TOP2BQ02880 1626 aa36.77■■■■□ 3.48
TMPO-201ENST00000261210 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
TMPO-201ENST00000261210 WRNQ14191 1432 aaPredicted RBP eCLIP36.75■■■■□ 3.47
TMPO-201ENST00000261210 SYNJ2O15056 1496 aa36.75■■■■□ 3.47
TMPO-201ENST00000261210 CLASP1Q7Z460 1538 aa36.73■■■■□ 3.47
TMPO-201ENST00000261210 ARAP1Q96P48 1450 aa36.68■■■■□ 3.46
TMPO-201ENST00000261210 CYB5RLQ6IPT4 315 aa36.66■■■■□ 3.46
TMPO-201ENST00000261210 ADAMTS12P58397 1594 aa36.5■■■■□ 3.43
TMPO-201ENST00000261210 GRIN2AQ12879 1464 aa36.44■■■■□ 3.42
TMPO-201ENST00000261210 ERICH3Q5RHP9 1530 aa36.37■■■■□ 3.41
TMPO-201ENST00000261210 CEP170Q5SW79 1584 aa36.34■■■■□ 3.41
TMPO-201ENST00000261210 FHAD1B1AJZ9 1412 aa36.34■■■■□ 3.41
TMPO-201ENST00000261210 NUP160Q12769 1436 aa36.31■■■■□ 3.4
TMPO-201ENST00000261210 ERCC6L2Q5T890 1561 aa36.23■■■■□ 3.39
TMPO-201ENST00000261210 TRHP20396 242 aaPredicted RBP36.14■■■■□ 3.38
TMPO-201ENST00000261210 SHROOM2Q13796 1616 aa36.14■■■■□ 3.38
TMPO-201ENST00000261210 KIF27Q86VH2 1401 aa36■■■■□ 3.35
TMPO-201ENST00000261210 RUSC2Q8N2Y8 1516 aa35.99■■■■□ 3.35
TMPO-201ENST00000261210 IGF1RP08069 1367 aa35.97■■■■□ 3.35
TMPO-201ENST00000261210 PRG4Q92954 1404 aaPredicted RBP35.92■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms