RNA–Protein interactions for RNA: ENST00000366528.3

COX20-201, Transcript of cytochrome c oxidase assembly factor COX20, humanhuman

TSL 2 BASIC

Gene COX20, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX20-201ENST00000366528 NISCHQ9Y2I1 1504 aa52.11■■■■■ 5.93
COX20-201ENST00000366528 CCDC180Q9P1Z9 1646 aa46.42■■■■■ 5.02
COX20-201ENST00000366528 ABCC9O60706 1549 aa45.75■■■■■ 4.91
COX20-201ENST00000366528 RB1CC1Q8TDY2 1594 aa43.85■■■■■ 4.61
COX20-201ENST00000366528 DCAF8L2P0C7V8 631 aa43.81■■■■■ 4.6
COX20-201ENST00000366528 NACADO15069 1562 aa43.71■■■■■ 4.59
COX20-201ENST00000366528 ZCCHC6Q5VYS8 1495 aaKnown RBP43.33■■■■■ 4.53
COX20-201ENST00000366528 MYO15BQ96JP2 1530 aa43.32■■■■■ 4.52
COX20-201ENST00000366528 DCAF1Q9Y4B6 1507 aa43.05■■■■■ 4.48
COX20-201ENST00000366528 UNC13AQ9UPW8 1703 aa42.84■■■■■ 4.45
COX20-201ENST00000366528 PABPN1Q86U42 306 aaKnown RBP eCLIP42.74■■■■■ 4.43
COX20-201ENST00000366528 BICRAQ9NZM4 1560 aa42.5■■■■■ 4.39
COX20-201ENST00000366528 SCRIBQ14160 1630 aa42.42■■■■■ 4.38
COX20-201ENST00000366528 DNAJC5BQ9UF47 199 aa42.2■■■■■ 4.35
COX20-201ENST00000366528 SHROOM4Q9ULL8 1493 aa41.99■■■■■ 4.31
COX20-201ENST00000366528 EIF4G1Q04637 1599 aaKnown RBP41.42■■■■■ 4.22
COX20-201ENST00000366528 CC2D2AQ9P2K1 1620 aa41.33■■■■■ 4.21
COX20-201ENST00000366528 CECR2Q9BXF3 1484 aa41.12■■■■■ 4.17
COX20-201ENST00000366528 SMARCA4P51532 1647 aa40.49■■■■■ 4.07
COX20-201ENST00000366528 BAZ1AQ9NRL2 1556 aaPredicted RBP40.41■■■■■ 4.06
COX20-201ENST00000366528 NCAPD3P42695 1498 aa40.33■■■■■ 4.05
COX20-201ENST00000366528 ATAD2BQ9ULI0 1458 aa40.33■■■■■ 4.05
COX20-201ENST00000366528 SMARCA2P51531 1590 aa40.28■■■■■ 4.04
COX20-201ENST00000366528 MROH2BQ7Z745 1585 aa40.17■■■■■ 4.02
COX20-201ENST00000366528 HMGXB3Q12766 1538 aa40.11■■■■■ 4.01
COX20-201ENST00000366528 PEG3Q9GZU2 1588 aa40.05■■■■■ 4
COX20-201ENST00000366528 BAZ1BQ9UIG0 1483 aaKnown RBP40.03■■■■■ 4
COX20-201ENST00000366528 WIZO95785 1651 aa39.74■■■■□ 3.95
COX20-201ENST00000366528 RSF1Q96T23 1441 aaPredicted RBP39.62■■■■□ 3.93
COX20-201ENST00000366528 NESP48681 1621 aa39.5■■■■□ 3.91
COX20-201ENST00000366528 ERCC6Q03468 1493 aa39.49■■■■□ 3.91
COX20-201ENST00000366528 LAMC3Q9Y6N6 1575 aa39.33■■■■□ 3.89
COX20-201ENST00000366528 TOP2AP11388 1531 aaKnown RBP39.28■■■■□ 3.88
COX20-201ENST00000366528 CADPSQ9ULU8 1353 aa39.18■■■■□ 3.86
COX20-201ENST00000366528 PDS5BQ9NTI5 1447 aa39.11■■■■□ 3.85
COX20-201ENST00000366528 CUX2O14529 1486 aa39.07■■■■□ 3.85
COX20-201ENST00000366528 KIF21AQ7Z4S6 1674 aa39.01■■■■□ 3.84
COX20-201ENST00000366528 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
COX20-201ENST00000366528 CFTRP13569 1480 aa38.86■■■■□ 3.81
COX20-201ENST00000366528 CCDC88BA6NC98 1476 aa38.84■■■■□ 3.81
COX20-201ENST00000366528 FANCD2Q9BXW9 1451 aa38.74■■■■□ 3.79
COX20-201ENST00000366528 CEP164Q9UPV0 1460 aa38.73■■■■□ 3.79
COX20-201ENST00000366528 MRC2Q9UBG0 1479 aa38.7■■■■□ 3.79
COX20-201ENST00000366528 WDR62O43379 1518 aa38.56■■■■□ 3.76
COX20-201ENST00000366528 SUPT5HO00267 1087 aaKnown RBP38.55■■■■□ 3.76
COX20-201ENST00000366528 PRDM2Q13029 1718 aa38.55■■■■□ 3.76
COX20-201ENST00000366528 URB2Q14146 1524 aaKnown RBP38.35■■■■□ 3.73
COX20-201ENST00000366528 DNAJC5Q9H3Z4 198 aa38.21■■■■□ 3.71
COX20-201ENST00000366528 TOPBP1Q92547 1522 aa38.08■■■■□ 3.69
COX20-201ENST00000366528 ABCC8Q09428 1581 aa38.06■■■■□ 3.68
COX20-201ENST00000366528 DNMBPQ6XZF7 1577 aa38.01■■■■□ 3.67
COX20-201ENST00000366528 IFT140Q96RY7 1462 aa37.9■■■■□ 3.66
COX20-201ENST00000366528 ZNF608Q9ULD9 1512 aaPredicted RBP37.77■■■■□ 3.64
COX20-201ENST00000366528 POLA1P09884 1462 aaPredicted RBP37.74■■■■□ 3.63
COX20-201ENST00000366528 CUX1P39880 1505 aa37.7■■■■□ 3.63
COX20-201ENST00000366528 TARBP1Q13395 1621 aaKnown RBP37.66■■■■□ 3.62
COX20-201ENST00000366528 FGD5Q6ZNL6 1462 aa37.63■■■■□ 3.61
COX20-201ENST00000366528 SOGA1O94964 1423 aa37.61■■■■□ 3.61
COX20-201ENST00000366528 RAD54L2Q9Y4B4 1467 aa37.61■■■■□ 3.61
COX20-201ENST00000366528 EIF4G3O43432 1585 aaKnown RBP37.6■■■■□ 3.61
COX20-201ENST00000366528 AQRO60306 1485 aaKnown RBP eCLIP37.54■■■■□ 3.65e-7■□□□□ 8.8
COX20-201ENST00000366528 OSCARQ8IYS5 282 aa37.48■■■■□ 3.59
COX20-201ENST00000366528 TDRD9Q8NDG6 1382 aaKnown RBP37.45■■■■□ 3.59
COX20-201ENST00000366528 WRNQ14191 1432 aaPredicted RBP eCLIP37.38■■■■□ 3.57
COX20-201ENST00000366528 WDR97A6NE52 1622 aa37.32■■■■□ 3.57
COX20-201ENST00000366528 TOP2BQ02880 1626 aa37.3■■■■□ 3.56
COX20-201ENST00000366528 SYNJ1O43426 1573 aa37.29■■■■□ 3.56
COX20-201ENST00000366528 BIVM-ERCC5R4GMW8 1640 aa37.28■■■■□ 3.56
COX20-201ENST00000366528 FBLN2P98095 1184 aa37.23■■■■□ 3.55
COX20-201ENST00000366528 ABCA10Q8WWZ4 1543 aa37.22■■■■□ 3.55
COX20-201ENST00000366528 CHD1O14646 1710 aa37.19■■■■□ 3.54
COX20-201ENST00000366528 GRIN2BQ13224 1484 aa37.19■■■■□ 3.54
COX20-201ENST00000366528 SNAPC4Q5SXM2 1469 aa37.18■■■■□ 3.54
COX20-201ENST00000366528 GAPVD1Q14C86 1478 aa37.16■■■■□ 3.54
COX20-201ENST00000366528 MAGI1Q96QZ7 1491 aaPredicted RBP37.1■■■■□ 3.53
COX20-201ENST00000366528 PBRM1Q86U86 1689 aa37.09■■■■□ 3.53
COX20-201ENST00000366528 ABCA5Q8WWZ7 1642 aa37.09■■■■□ 3.53
COX20-201ENST00000366528 CHMP7Q8WUX9 453 aaPredicted RBP37.05■■■■□ 3.52
COX20-201ENST00000366528 SYNJ2O15056 1496 aa36.97■■■■□ 3.51
COX20-201ENST00000366528 TRIM41Q8WV44 630 aa36.94■■■■□ 3.5
COX20-201ENST00000366528 RIMBP3CA6NJZ7 1639 aa36.87■■■■□ 3.49
COX20-201ENST00000366528 RIMBP3BA6NNM3 1639 aa36.87■■■■□ 3.49
COX20-201ENST00000366528 RIMBP3Q9UFD9 1639 aa36.87■■■■□ 3.49
COX20-201ENST00000366528 ARHGEF11O15085 1522 aa36.83■■■■□ 3.49
COX20-201ENST00000366528 ERICH3Q5RHP9 1530 aa36.78■■■■□ 3.48
COX20-201ENST00000366528 ADAMTS12P58397 1594 aa36.77■■■■□ 3.48
COX20-201ENST00000366528 CLASP1Q7Z460 1538 aa36.75■■■■□ 3.47
COX20-201ENST00000366528 FHAD1B1AJZ9 1412 aa36.71■■■■□ 3.47
COX20-201ENST00000366528 GRIN2AQ12879 1464 aa36.7■■■■□ 3.47
COX20-201ENST00000366528 KIF27Q86VH2 1401 aa36.63■■■■□ 3.45
COX20-201ENST00000366528 CYB5RLQ6IPT4 315 aa36.58■■■■□ 3.45
COX20-201ENST00000366528 CEP170Q5SW79 1584 aa36.53■■■■□ 3.44
COX20-201ENST00000366528 NUP160Q12769 1436 aa36.51■■■■□ 3.44
COX20-201ENST00000366528 ARAP1Q96P48 1450 aa36.51■■■■□ 3.44
COX20-201ENST00000366528 IGF1RP08069 1367 aa36.5■■■■□ 3.43
COX20-201ENST00000366528 CUL7Q14999 1698 aa36.41■■■■□ 3.42
COX20-201ENST00000366528 CARMIL1Q5VZK9 1371 aa36.29■■■■□ 3.4
COX20-201ENST00000366528 SHROOM2Q13796 1616 aa36.26■■■■□ 3.4
COX20-201ENST00000366528 ERCC6L2Q5T890 1561 aa36.25■■■■□ 3.39
COX20-201ENST00000366528 RUSC2Q8N2Y8 1516 aa36.23■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms