RNA–Protein interactions for RNA: ENST00000393761.6

CD8B-205, Transcript of CD8b molecule, humanhuman

TSL 1 (best) BASIC

Gene CD8B, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD8B-205ENST00000393761 NISCHQ9Y2I1 1504 aa51.79■■■■■ 5.88
CD8B-205ENST00000393761 CCDC180Q9P1Z9 1646 aa46.36■■■■■ 5.01
CD8B-205ENST00000393761 ABCC9O60706 1549 aa45.76■■■■■ 4.92
CD8B-205ENST00000393761 RB1CC1Q8TDY2 1594 aa43.76■■■■■ 4.6
CD8B-205ENST00000393761 NACADO15069 1562 aa43.6■■■■■ 4.57
CD8B-205ENST00000393761 MYO15BQ96JP2 1530 aa43.22■■■■■ 4.51
CD8B-205ENST00000393761 ZCCHC6Q5VYS8 1495 aaKnown RBP43.09■■■■■ 4.49
CD8B-205ENST00000393761 UNC13AQ9UPW8 1703 aa43.08■■■■■ 4.49
CD8B-205ENST00000393761 DCAF8L2P0C7V8 631 aa43.03■■■■■ 4.48
CD8B-205ENST00000393761 DCAF1Q9Y4B6 1507 aa42.84■■■■■ 4.45
CD8B-205ENST00000393761 BICRAQ9NZM4 1560 aa42.71■■■■■ 4.43
CD8B-205ENST00000393761 DNAJC5BQ9UF47 199 aa42.59■■■■■ 4.41
CD8B-205ENST00000393761 PABPN1Q86U42 306 aaKnown RBP eCLIP42.55■■■■■ 4.4
CD8B-205ENST00000393761 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
CD8B-205ENST00000393761 SHROOM4Q9ULL8 1493 aa42■■■■■ 4.31
CD8B-205ENST00000393761 EIF4G1Q04637 1599 aaKnown RBP41.49■■■■■ 4.23
CD8B-205ENST00000393761 CC2D2AQ9P2K1 1620 aa41.46■■■■■ 4.23
CD8B-205ENST00000393761 CECR2Q9BXF3 1484 aa41.15■■■■■ 4.18
CD8B-205ENST00000393761 SMARCA4P51532 1647 aa40.35■■■■■ 4.05
CD8B-205ENST00000393761 NCAPD3P42695 1498 aa40.24■■■■■ 4.03
CD8B-205ENST00000393761 ATAD2BQ9ULI0 1458 aa40.2■■■■■ 4.03
CD8B-205ENST00000393761 BAZ1AQ9NRL2 1556 aaPredicted RBP40.11■■■■■ 4.01
CD8B-205ENST00000393761 SMARCA2P51531 1590 aa40.06■■■■■ 4
CD8B-205ENST00000393761 HMGXB3Q12766 1538 aa40.06■■■■■ 4
CD8B-205ENST00000393761 PEG3Q9GZU2 1588 aa40.01■■■■□ 3.99
CD8B-205ENST00000393761 MROH2BQ7Z745 1585 aa39.95■■■■□ 3.99
CD8B-205ENST00000393761 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
CD8B-205ENST00000393761 NESP48681 1621 aa39.54■■■■□ 3.92
CD8B-205ENST00000393761 WIZO95785 1651 aa39.51■■■■□ 3.92
CD8B-205ENST00000393761 ERCC6Q03468 1493 aa39.33■■■■□ 3.89
CD8B-205ENST00000393761 LAMC3Q9Y6N6 1575 aa39.28■■■■□ 3.88
CD8B-205ENST00000393761 CUX2O14529 1486 aa39.25■■■■□ 3.87
CD8B-205ENST00000393761 RSF1Q96T23 1441 aaPredicted RBP39.21■■■■□ 3.87
CD8B-205ENST00000393761 THOC2Q8NI27 1593 aaKnown RBP39.16■■■■□ 3.86
CD8B-205ENST00000393761 KIF21AQ7Z4S6 1674 aa39.13■■■■□ 3.85
CD8B-205ENST00000393761 TOP2AP11388 1531 aaKnown RBP39■■■■□ 3.83
CD8B-205ENST00000393761 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
CD8B-205ENST00000393761 PDS5BQ9NTI5 1447 aa38.86■■■■□ 3.81
CD8B-205ENST00000393761 CFTRP13569 1480 aa38.71■■■■□ 3.79
CD8B-205ENST00000393761 WDR62O43379 1518 aa38.64■■■■□ 3.78
CD8B-205ENST00000393761 MRC2Q9UBG0 1479 aa38.64■■■■□ 3.78
CD8B-205ENST00000393761 DNAJC5Q9H3Z4 198 aa38.62■■■■□ 3.77
CD8B-205ENST00000393761 FANCD2Q9BXW9 1451 aa38.55■■■■□ 3.76
CD8B-205ENST00000393761 CEP164Q9UPV0 1460 aa38.54■■■■□ 3.76
CD8B-205ENST00000393761 PRDM2Q13029 1718 aa38.52■■■■□ 3.76
CD8B-205ENST00000393761 CCDC88BA6NC98 1476 aa38.49■■■■□ 3.75
CD8B-205ENST00000393761 URB2Q14146 1524 aaKnown RBP38.33■■■■□ 3.73
CD8B-205ENST00000393761 TOPBP1Q92547 1522 aa37.94■■■■□ 3.66
CD8B-205ENST00000393761 DNMBPQ6XZF7 1577 aa37.85■■■■□ 3.65
CD8B-205ENST00000393761 ZNF608Q9ULD9 1512 aaPredicted RBP37.77■■■■□ 3.64
CD8B-205ENST00000393761 IFT140Q96RY7 1462 aa37.76■■■■□ 3.63
CD8B-205ENST00000393761 ABCC8Q09428 1581 aa37.72■■■■□ 3.63
CD8B-205ENST00000393761 TARBP1Q13395 1621 aaKnown RBP37.68■■■■□ 3.62
CD8B-205ENST00000393761 EIF4G3O43432 1585 aaKnown RBP37.63■■■■□ 3.61
CD8B-205ENST00000393761 POLA1P09884 1462 aaPredicted RBP37.59■■■■□ 3.61
CD8B-205ENST00000393761 CUX1P39880 1505 aa37.51■■■■□ 3.59
CD8B-205ENST00000393761 SUPT5HO00267 1087 aaKnown RBP37.49■■■■□ 3.59
CD8B-205ENST00000393761 RAD54L2Q9Y4B4 1467 aa37.42■■■■□ 3.58
CD8B-205ENST00000393761 FGD5Q6ZNL6 1462 aa37.4■■■■□ 3.58
CD8B-205ENST00000393761 AQRO60306 1485 aaKnown RBP eCLIP37.37■■■■□ 3.57
CD8B-205ENST00000393761 WDR97A6NE52 1622 aa37.33■■■■□ 3.57
CD8B-205ENST00000393761 OSCARQ8IYS5 282 aa37.3■■■■□ 3.56
CD8B-205ENST00000393761 CHD1O14646 1710 aa37.29■■■■□ 3.56
CD8B-205ENST00000393761 SOGA1O94964 1423 aa37.27■■■■□ 3.56
CD8B-205ENST00000393761 TDRD9Q8NDG6 1382 aaKnown RBP37.16■■■■□ 3.54
CD8B-205ENST00000393761 RIMBP3CA6NJZ7 1639 aa37.11■■■■□ 3.53
CD8B-205ENST00000393761 RIMBP3BA6NNM3 1639 aa37.11■■■■□ 3.53
CD8B-205ENST00000393761 RIMBP3Q9UFD9 1639 aa37.11■■■■□ 3.53
CD8B-205ENST00000393761 BIVM-ERCC5R4GMW8 1640 aa37.08■■■■□ 3.53
CD8B-205ENST00000393761 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
CD8B-205ENST00000393761 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
CD8B-205ENST00000393761 ABCA5Q8WWZ7 1642 aa37.04■■■■□ 3.52
CD8B-205ENST00000393761 PBRM1Q86U86 1689 aa37.03■■■■□ 3.52
CD8B-205ENST00000393761 ABCA10Q8WWZ4 1543 aa37.01■■■■□ 3.52
CD8B-205ENST00000393761 TOP2BQ02880 1626 aa37.01■■■■□ 3.52
CD8B-205ENST00000393761 ARHGEF11O15085 1522 aa36.99■■■■□ 3.51
CD8B-205ENST00000393761 TRIM41Q8WV44 630 aa36.96■■■■□ 3.51
CD8B-205ENST00000393761 GRIN2BQ13224 1484 aa36.95■■■■□ 3.51
CD8B-205ENST00000393761 MAGI1Q96QZ7 1491 aaPredicted RBP36.94■■■■□ 3.5
CD8B-205ENST00000393761 WRNQ14191 1432 aaPredicted RBP eCLIP36.9■■■■□ 3.5
CD8B-205ENST00000393761 CLASP1Q7Z460 1538 aa36.88■■■■□ 3.49
CD8B-205ENST00000393761 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.49
CD8B-205ENST00000393761 SYNJ2O15056 1496 aa36.81■■■■□ 3.48
CD8B-205ENST00000393761 FBLN2P98095 1184 aa36.74■■■■□ 3.47
CD8B-205ENST00000393761 ARAP1Q96P48 1450 aa36.7■■■■□ 3.47
CD8B-205ENST00000393761 ADAMTS12P58397 1594 aa36.7■■■■□ 3.46
CD8B-205ENST00000393761 CHMP7Q8WUX9 453 aaPredicted RBP36.59■■■■□ 3.45
CD8B-205ENST00000393761 GRIN2AQ12879 1464 aa36.54■■■■□ 3.44
CD8B-205ENST00000393761 ERICH3Q5RHP9 1530 aa36.53■■■■□ 3.44
CD8B-205ENST00000393761 CEP170Q5SW79 1584 aa36.5■■■■□ 3.43
CD8B-205ENST00000393761 NUP160Q12769 1436 aa36.45■■■■□ 3.43
CD8B-205ENST00000393761 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
CD8B-205ENST00000393761 CYB5RLQ6IPT4 315 aa36.41■■■■□ 3.42
CD8B-205ENST00000393761 ERCC6L2Q5T890 1561 aa36.36■■■■□ 3.41
CD8B-205ENST00000393761 SHROOM2Q13796 1616 aa36.34■■■■□ 3.41
CD8B-205ENST00000393761 RUSC2Q8N2Y8 1516 aa36.19■■■■□ 3.38
CD8B-205ENST00000393761 CUL7Q14999 1698 aa36.11■■■■□ 3.37
CD8B-205ENST00000393761 IGF1RP08069 1367 aa36.1■■■■□ 3.37
CD8B-205ENST00000393761 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
CD8B-205ENST00000393761 PRG4Q92954 1404 aaPredicted RBP35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms