Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.71■■■□□ 2.51
USP6P35125 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
USP6P35125 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
USP6P35125 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
USP6P35125 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.7■■■□□ 2.51
USP6P35125 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.7■■■□□ 2.51
USP6P35125 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
USP6P35125 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
USP6P35125 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
USP6P35125 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC30.7■■■□□ 2.5
USP6P35125 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.7■■■□□ 2.5
USP6P35125 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.7■■■□□ 2.5
USP6P35125 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
USP6P35125 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.7■■■□□ 2.5
USP6P35125 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
USP6P35125 DUX4L4-201ENST00000566884 1269 ntBASIC30.69■■■□□ 2.5
USP6P35125 AC022517.1-201ENST00000592429 346 ntBASIC30.69■■■□□ 2.5
USP6P35125 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
USP6P35125 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
USP6P35125 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
USP6P35125 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
USP6P35125 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
USP6P35125 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
USP6P35125 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP6P35125 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.68■■■□□ 2.5
USP6P35125 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.68■■■□□ 2.5
USP6P35125 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
USP6P35125 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC30.68■■■□□ 2.5
USP6P35125 AL354811.1-201ENST00000610286 706 ntBASIC30.68■■■□□ 2.5
USP6P35125 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
USP6P35125 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP6P35125 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP6P35125 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP6P35125 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
USP6P35125 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
USP6P35125 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.67■■■□□ 2.5
USP6P35125 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.67■■■□□ 2.5
USP6P35125 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.67■■■□□ 2.5
USP6P35125 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
USP6P35125 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP6P35125 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
USP6P35125 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
USP6P35125 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
USP6P35125 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USP6P35125 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USP6P35125 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.66■■■□□ 2.5
USP6P35125 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USP6P35125 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC30.66■■■□□ 2.5
USP6P35125 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
USP6P35125 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
USP6P35125 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC30.65■■■□□ 2.5
USP6P35125 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.65■■■□□ 2.5
USP6P35125 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 RARRES2P11-201ENST00000635158 484 ntBASIC30.65■■■□□ 2.5
USP6P35125 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
USP6P35125 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 AC138932.3-201ENST00000567634 1902 ntBASIC30.65■■■□□ 2.5
USP6P35125 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP6P35125 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
USP6P35125 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.64■■■□□ 2.5
USP6P35125 CCDC92B-201ENST00000575506 885 ntBASIC30.64■■■□□ 2.5
USP6P35125 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.64■■■□□ 2.5
USP6P35125 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
USP6P35125 FP325331.1-202ENST00000623531 1380 ntBASIC30.64■■■□□ 2.5
USP6P35125 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
USP6P35125 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
USP6P35125 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.49
USP6P35125 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
USP6P35125 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
USP6P35125 AC090192.1-201ENST00000517740 490 ntBASIC30.64■■■□□ 2.49
USP6P35125 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.64■■■□□ 2.49
USP6P35125 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC30.63■■■□□ 2.49
USP6P35125 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.63■■■□□ 2.49
USP6P35125 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.63■■■□□ 2.49
USP6P35125 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP6P35125 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP6P35125 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP6P35125 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
USP6P35125 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
USP6P35125 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
USP6P35125 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
USP6P35125 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
USP6P35125 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
USP6P35125 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.62■■■□□ 2.49
USP6P35125 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
USP6P35125 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
USP6P35125 AC142381.3-201ENST00000568208 1670 ntBASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms