RNA–Protein interactions for RNA: ENST00000216037.10

XBP1-201, Transcript of X-box binding protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene XBP1, Length 1,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XBP1-201ENST00000216037 NISCHQ9Y2I1 1504 aa52.53■■■■■ 6
XBP1-201ENST00000216037 CCDC180Q9P1Z9 1646 aa46.2■■■■■ 4.99
XBP1-201ENST00000216037 ABCC9O60706 1549 aa44.27■■■■■ 4.68
XBP1-201ENST00000216037 ZCCHC6Q5VYS8 1495 aaKnown RBP43.96■■■■■ 4.63
XBP1-201ENST00000216037 DCAF8L2P0C7V8 631 aa43.51■■■■■ 4.56
XBP1-201ENST00000216037 DCAF1Q9Y4B6 1507 aa43.49■■■■■ 4.55
XBP1-201ENST00000216037 MYO15BQ96JP2 1530 aa43.29■■■■■ 4.52
XBP1-201ENST00000216037 NACADO15069 1562 aa43.21■■■■■ 4.51
XBP1-201ENST00000216037 RB1CC1Q8TDY2 1594 aa43■■■■■ 4.47
XBP1-201ENST00000216037 SCRIBQ14160 1630 aa42.27■■■■■ 4.36
XBP1-201ENST00000216037 SHROOM4Q9ULL8 1493 aa42.16■■■■■ 4.34
XBP1-201ENST00000216037 UNC13AQ9UPW8 1703 aa42.08■■■■■ 4.33
XBP1-201ENST00000216037 BICRAQ9NZM4 1560 aa41.7■■■■■ 4.27
XBP1-201ENST00000216037 PABPN1Q86U42 306 aaKnown RBP eCLIP41.58■■■■■ 4.25
XBP1-201ENST00000216037 CECR2Q9BXF3 1484 aa40.82■■■■■ 4.13
XBP1-201ENST00000216037 BAZ1AQ9NRL2 1556 aaPredicted RBP40.62■■■■■ 4.09
XBP1-201ENST00000216037 SMARCA4P51532 1647 aa40.53■■■■■ 4.08
XBP1-201ENST00000216037 MROH2BQ7Z745 1585 aa40.52■■■■■ 4.08
XBP1-201ENST00000216037 EIF4G1Q04637 1599 aaKnown RBP40.5■■■■■ 4.07
XBP1-201ENST00000216037 RSF1Q96T23 1441 aaPredicted RBP40.43■■■■■ 4.06
XBP1-201ENST00000216037 SUPT5HO00267 1087 aaKnown RBP40.2■■■■■ 4.03
XBP1-201ENST00000216037 WIZO95785 1651 aa40.13■■■■■ 4.01
XBP1-201ENST00000216037 PEG3Q9GZU2 1588 aa40.11■■■■■ 4.01
XBP1-201ENST00000216037 CC2D2AQ9P2K1 1620 aa40.08■■■■■ 4.01
XBP1-201ENST00000216037 ATAD2BQ9ULI0 1458 aa40.06■■■■■ 4
XBP1-201ENST00000216037 SMARCA2P51531 1590 aa40.04■■■■■ 4
XBP1-201ENST00000216037 NCAPD3P42695 1498 aa39.88■■■■□ 3.97
XBP1-201ENST00000216037 BAZ1BQ9UIG0 1483 aaKnown RBP39.77■■■■□ 3.96
XBP1-201ENST00000216037 DNAJC5BQ9UF47 199 aa39.76■■■■□ 3.96
XBP1-201ENST00000216037 HMGXB3Q12766 1538 aa39.75■■■■□ 3.95
XBP1-201ENST00000216037 TOP2AP11388 1531 aaKnown RBP39.73■■■■□ 3.95
XBP1-201ENST00000216037 CCDC88BA6NC98 1476 aa39.3■■■■□ 3.88
XBP1-201ENST00000216037 CADPSQ9ULU8 1353 aa38.78■■■■□ 3.8
XBP1-201ENST00000216037 CFTRP13569 1480 aa38.77■■■■□ 3.8
XBP1-201ENST00000216037 LAMC3Q9Y6N6 1575 aa38.65■■■■□ 3.78
XBP1-201ENST00000216037 NESP48681 1621 aa38.62■■■■□ 3.77
XBP1-201ENST00000216037 PRDM2Q13029 1718 aa38.53■■■■□ 3.76
XBP1-201ENST00000216037 PDS5BQ9NTI5 1447 aa38.36■■■■□ 3.73
XBP1-201ENST00000216037 FANCD2Q9BXW9 1451 aa38.33■■■■□ 3.73
XBP1-201ENST00000216037 KIF21AQ7Z4S6 1674 aa38.18■■■■□ 3.7
XBP1-201ENST00000216037 ABCC8Q09428 1581 aa38.17■■■■□ 3.7
XBP1-201ENST00000216037 CEP164Q9UPV0 1460 aa38.17■■■■□ 3.7
XBP1-201ENST00000216037 CHIC1Q5VXU3 224 aa38.13■■■■□ 3.7
XBP1-201ENST00000216037 WRNQ14191 1432 aaPredicted RBP eCLIP38.07■■■■□ 3.68
XBP1-201ENST00000216037 ERCC6Q03468 1493 aa38.05■■■■□ 3.68
XBP1-201ENST00000216037 CUX1P39880 1505 aa37.94■■■■□ 3.66
XBP1-201ENST00000216037 SYNJ1O43426 1573 aa37.92■■■■□ 3.66
XBP1-201ENST00000216037 TRIM41Q8WV44 630 aa37.91■■■■□ 3.66
XBP1-201ENST00000216037 MRC2Q9UBG0 1479 aa37.9■■■■□ 3.66
XBP1-201ENST00000216037 URB2Q14146 1524 aaKnown RBP37.89■■■■□ 3.66
XBP1-201ENST00000216037 TOP2BQ02880 1626 aa37.87■■■■□ 3.65
XBP1-201ENST00000216037 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
XBP1-201ENST00000216037 BIVM-ERCC5R4GMW8 1640 aa37.85■■■■□ 3.65
XBP1-201ENST00000216037 TOPBP1Q92547 1522 aa37.84■■■■□ 3.65
XBP1-201ENST00000216037 THOC2Q8NI27 1593 aaKnown RBP37.78■■■■□ 3.64
XBP1-201ENST00000216037 WDR62O43379 1518 aa37.74■■■■□ 3.63
XBP1-201ENST00000216037 FGD5Q6ZNL6 1462 aa37.64■■■■□ 3.62
XBP1-201ENST00000216037 POLA1P09884 1462 aaPredicted RBP37.58■■■■□ 3.61
XBP1-201ENST00000216037 SOGA1O94964 1423 aa37.46■■■■□ 3.59
XBP1-201ENST00000216037 CUX2O14529 1486 aa37.43■■■■□ 3.58
XBP1-201ENST00000216037 RAD54L2Q9Y4B4 1467 aa37.43■■■■□ 3.58
XBP1-201ENST00000216037 TARBP1Q13395 1621 aaKnown RBP37.34■■■■□ 3.57
XBP1-201ENST00000216037 IFT140Q96RY7 1462 aa37.33■■■■□ 3.57
XBP1-201ENST00000216037 ABCA10Q8WWZ4 1543 aa37.32■■■■□ 3.57
XBP1-201ENST00000216037 WDR97A6NE52 1622 aa37.26■■■■□ 3.56
XBP1-201ENST00000216037 RUSC2Q8N2Y8 1516 aa37.21■■■■□ 3.55
XBP1-201ENST00000216037 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
XBP1-201ENST00000216037 EEA1Q15075 1411 aa37.16■■■■□ 3.54
XBP1-201ENST00000216037 TDRD9Q8NDG6 1382 aaKnown RBP37.13■■■■□ 3.53
XBP1-201ENST00000216037 FAM9AQ8IZU1 332 aaPredicted RBP37.11■■■■□ 3.53
XBP1-201ENST00000216037 ZNF608Q9ULD9 1512 aaPredicted RBP37.1■■■■□ 3.53
XBP1-201ENST00000216037 ABCA5Q8WWZ7 1642 aa37.07■■■■□ 3.52
XBP1-201ENST00000216037 GAPVD1Q14C86 1478 aa37.04■■■■□ 3.52
XBP1-201ENST00000216037 AQRO60306 1485 aaKnown RBP eCLIP37.03■■■■□ 3.521e-8■■■■□ 24.7
XBP1-201ENST00000216037 CSRNP3Q8WYN3 585 aa37■■■■□ 3.51
XBP1-201ENST00000216037 EIF4G3O43432 1585 aaKnown RBP36.97■■■■□ 3.51
XBP1-201ENST00000216037 IGF1RP08069 1367 aa36.95■■■■□ 3.51
XBP1-201ENST00000216037 ERICH3Q5RHP9 1530 aa36.89■■■■□ 3.5
XBP1-201ENST00000216037 GRIN2BQ13224 1484 aa36.88■■■■□ 3.49
XBP1-201ENST00000216037 PBRM1Q86U86 1689 aa36.87■■■■□ 3.49
XBP1-201ENST00000216037 PRXQ9BXM0 1461 aa36.75■■■■□ 3.47
XBP1-201ENST00000216037 CARMIL1Q5VZK9 1371 aa36.74■■■■□ 3.47
XBP1-201ENST00000216037 CUL7Q14999 1698 aa36.74■■■■□ 3.47
XBP1-201ENST00000216037 KIF21BO75037 1637 aa36.69■■■■□ 3.46
XBP1-201ENST00000216037 SNAPC4Q5SXM2 1469 aa36.69■■■■□ 3.46
XBP1-201ENST00000216037 MAGI1Q96QZ7 1491 aaPredicted RBP36.67■■■■□ 3.46
XBP1-201ENST00000216037 FHAD1B1AJZ9 1412 aa36.64■■■■□ 3.46
XBP1-201ENST00000216037 ADAMTS12P58397 1594 aa36.63■■■■□ 3.46
XBP1-201ENST00000216037 RAPGEF2Q9Y4G8 1499 aa36.62■■■■□ 3.45
XBP1-201ENST00000216037 LOC105371045A0A1W2PR82 267 aa36.6■■■■□ 3.45
XBP1-201ENST00000216037 GOLGA3Q08378 1498 aa36.57■■■■□ 3.44
XBP1-201ENST00000216037 EHMT2Q96KQ7 1210 aa36.56■■■■□ 3.44
XBP1-201ENST00000216037 SYNJ2O15056 1496 aa36.51■■■■□ 3.44
XBP1-201ENST00000216037 CHMP7Q8WUX9 453 aaPredicted RBP36.45■■■■□ 3.43
XBP1-201ENST00000216037 GRIN2AQ12879 1464 aa36.41■■■■□ 3.42
XBP1-201ENST00000216037 UBTFP17480 764 aaKnown RBP36.41■■■■□ 3.42
XBP1-201ENST00000216037 FBLN2P98095 1184 aa36.39■■■■□ 3.42
XBP1-201ENST00000216037 TNIKQ9UKE5 1360 aa36.33■■■■□ 3.41
XBP1-201ENST00000216037 CHD1O14646 1710 aa36.32■■■■□ 3.4
XBP1-201ENST00000216037 NUP160Q12769 1436 aa36.21■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms