Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.83■■■□□ 2.53
PCDHA11Q9Y5I1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHA11Q9Y5I1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA11Q9Y5I1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA11Q9Y5I1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCDHA11Q9Y5I1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.79■■■□□ 2.52
PCDHA11Q9Y5I1 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.78■■■□□ 2.52
PCDHA11Q9Y5I1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
PCDHA11Q9Y5I1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHA11Q9Y5I1 MIR7108-201ENST00000614319 87 ntBASIC30.75■■■□□ 2.51
PCDHA11Q9Y5I1 ABHD17AP4-201ENST00000411545 909 ntBASIC30.73■■■□□ 2.51
PCDHA11Q9Y5I1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.72■■■□□ 2.51
PCDHA11Q9Y5I1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHA11Q9Y5I1 AC145285.7-201ENST00000614819 1539 ntBASIC30.7■■■□□ 2.51
PCDHA11Q9Y5I1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
PCDHA11Q9Y5I1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.7■■■□□ 2.51
PCDHA11Q9Y5I1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA11Q9Y5I1 AL133380.1-201ENST00000506013 324 ntBASIC30.68■■■□□ 2.5
PCDHA11Q9Y5I1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
PCDHA11Q9Y5I1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.66■■■□□ 2.5
PCDHA11Q9Y5I1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA11Q9Y5I1 MIR3665-201ENST00000578708 105 ntBASIC30.66■■■□□ 2.5
PCDHA11Q9Y5I1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHA11Q9Y5I1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHA11Q9Y5I1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.63■■■□□ 2.49
PCDHA11Q9Y5I1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.62■■■□□ 2.49
PCDHA11Q9Y5I1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.6■■■□□ 2.49
PCDHA11Q9Y5I1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.57■■■□□ 2.48
PCDHA11Q9Y5I1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.57■■■□□ 2.48
PCDHA11Q9Y5I1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.57■■■□□ 2.48
PCDHA11Q9Y5I1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHA11Q9Y5I1 AC087741.3-201ENST00000624270 1347 ntBASIC30.52■■■□□ 2.48
PCDHA11Q9Y5I1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA11Q9Y5I1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA11Q9Y5I1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
PCDHA11Q9Y5I1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCDHA11Q9Y5I1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
PCDHA11Q9Y5I1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA11Q9Y5I1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA11Q9Y5I1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PCDHA11Q9Y5I1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.47■■■□□ 2.47
PCDHA11Q9Y5I1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PCDHA11Q9Y5I1 HLA-V-202ENST00000446817 847 ntBASIC30.46■■■□□ 2.47
PCDHA11Q9Y5I1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
PCDHA11Q9Y5I1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.45■■■□□ 2.47
PCDHA11Q9Y5I1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.44■■■□□ 2.46
PCDHA11Q9Y5I1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.44■■■□□ 2.46
PCDHA11Q9Y5I1 DUX4L28-201ENST00000623687 678 ntBASIC30.44■■■□□ 2.46
PCDHA11Q9Y5I1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
PCDHA11Q9Y5I1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHA11Q9Y5I1 AC044849.2-201ENST00000606596 710 ntBASIC30.41■■■□□ 2.46
PCDHA11Q9Y5I1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.39■■■□□ 2.45
PCDHA11Q9Y5I1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.39■■■□□ 2.45
PCDHA11Q9Y5I1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.38■■■□□ 2.45
PCDHA11Q9Y5I1 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.38■■■□□ 2.45
PCDHA11Q9Y5I1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PCDHA11Q9Y5I1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.35■■■□□ 2.45
PCDHA11Q9Y5I1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
PCDHA11Q9Y5I1 MIR762-201ENST00000390236 83 ntBASIC30.31■■■□□ 2.44
PCDHA11Q9Y5I1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.31■■■□□ 2.44
PCDHA11Q9Y5I1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.31■■■□□ 2.44
PCDHA11Q9Y5I1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.3■■■□□ 2.44
PCDHA11Q9Y5I1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
PCDHA11Q9Y5I1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
PCDHA11Q9Y5I1 AC005559.1-201ENST00000589661 871 ntBASIC30.28■■■□□ 2.44
PCDHA11Q9Y5I1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCDHA11Q9Y5I1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCDHA11Q9Y5I1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.24■■■□□ 2.43
PCDHA11Q9Y5I1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.24■■■□□ 2.43
PCDHA11Q9Y5I1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA11Q9Y5I1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.23■■■□□ 2.43
PCDHA11Q9Y5I1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHA11Q9Y5I1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDHA11Q9Y5I1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHA11Q9Y5I1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCDHA11Q9Y5I1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCDHA11Q9Y5I1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.18■■■□□ 2.42
PCDHA11Q9Y5I1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.18■■■□□ 2.42
PCDHA11Q9Y5I1 ZNRF2P2-203ENST00000454624 420 ntBASIC30.17■■■□□ 2.42
PCDHA11Q9Y5I1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.16■■■□□ 2.42
PCDHA11Q9Y5I1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.16■■■□□ 2.42
PCDHA11Q9Y5I1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.15■■■□□ 2.42
PCDHA11Q9Y5I1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.15■■■□□ 2.42
PCDHA11Q9Y5I1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHA11Q9Y5I1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.14■■■□□ 2.42
PCDHA11Q9Y5I1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDHA11Q9Y5I1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PCDHA11Q9Y5I1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PCDHA11Q9Y5I1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.12■■■□□ 2.41
PCDHA11Q9Y5I1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHA11Q9Y5I1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.09■■■□□ 2.41
PCDHA11Q9Y5I1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHA11Q9Y5I1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PCDHA11Q9Y5I1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PCDHA11Q9Y5I1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.01■■■□□ 2.39
PCDHA11Q9Y5I1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
PCDHA11Q9Y5I1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.01■■■□□ 2.39
PCDHA11Q9Y5I1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCDHA11Q9Y5I1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PCDHA11Q9Y5I1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms