Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
RTCBQ9Y3I0 AL133380.1-201ENST00000506013 324 ntBASIC36.21■■■■□ 3.39
RTCBQ9Y3I0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
RTCBQ9Y3I0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
RTCBQ9Y3I0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.18■■■■□ 3.38
RTCBQ9Y3I0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
RTCBQ9Y3I0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC36.16■■■■□ 3.38
RTCBQ9Y3I0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC36.16■■■■□ 3.38
RTCBQ9Y3I0 HNRNPLP2-201ENST00000568980 1570 ntBASIC36.13■■■■□ 3.37
RTCBQ9Y3I0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
RTCBQ9Y3I0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
RTCBQ9Y3I0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
RTCBQ9Y3I0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.02■■■■□ 3.36
RTCBQ9Y3I0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.02■■■■□ 3.36
RTCBQ9Y3I0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.01■■■■□ 3.36
RTCBQ9Y3I0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.01■■■■□ 3.36
RTCBQ9Y3I0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36■■■■□ 3.35
RTCBQ9Y3I0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36■■■■□ 3.35
RTCBQ9Y3I0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
RTCBQ9Y3I0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC35.97■■■■□ 3.35
RTCBQ9Y3I0 MIR3665-201ENST00000578708 105 ntBASIC35.97■■■■□ 3.35
RTCBQ9Y3I0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC35.95■■■■□ 3.35
RTCBQ9Y3I0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC35.94■■■■□ 3.34
RTCBQ9Y3I0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC35.94■■■■□ 3.34
RTCBQ9Y3I0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
RTCBQ9Y3I0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
RTCBQ9Y3I0 ABHD17AP4-201ENST00000411545 909 ntBASIC35.91■■■■□ 3.34
RTCBQ9Y3I0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
RTCBQ9Y3I0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.9■■■■□ 3.34
RTCBQ9Y3I0 MIR7108-201ENST00000614319 87 ntBASIC35.89■■■■□ 3.34
RTCBQ9Y3I0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.89■■■■□ 3.34
RTCBQ9Y3I0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
RTCBQ9Y3I0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
RTCBQ9Y3I0 AC087741.3-201ENST00000624270 1347 ntBASIC35.83■■■■□ 3.33
RTCBQ9Y3I0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
RTCBQ9Y3I0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
RTCBQ9Y3I0 DUX4L28-201ENST00000623687 678 ntBASIC35.79■■■■□ 3.32
RTCBQ9Y3I0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
RTCBQ9Y3I0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC35.76■■■■□ 3.32
RTCBQ9Y3I0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC35.74■■■■□ 3.31
RTCBQ9Y3I0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
RTCBQ9Y3I0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC35.73■■■■□ 3.31
RTCBQ9Y3I0 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.73■■■■□ 3.31
RTCBQ9Y3I0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC35.71■■■■□ 3.31
RTCBQ9Y3I0 MIR762-201ENST00000390236 83 ntBASIC35.69■■■■□ 3.3
RTCBQ9Y3I0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.69■■■■□ 3.3
RTCBQ9Y3I0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
RTCBQ9Y3I0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
RTCBQ9Y3I0 AC044849.2-201ENST00000606596 710 ntBASIC35.67■■■■□ 3.3
RTCBQ9Y3I0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.67■■■■□ 3.3
RTCBQ9Y3I0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
RTCBQ9Y3I0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC35.66■■■■□ 3.3
RTCBQ9Y3I0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.63■■■■□ 3.29
RTCBQ9Y3I0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC35.63■■■■□ 3.29
RTCBQ9Y3I0 AC005559.1-201ENST00000589661 871 ntBASIC35.62■■■■□ 3.29
RTCBQ9Y3I0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.61■■■■□ 3.29
RTCBQ9Y3I0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
RTCBQ9Y3I0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.56■■■■□ 3.28
RTCBQ9Y3I0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC35.56■■■■□ 3.28
RTCBQ9Y3I0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
RTCBQ9Y3I0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
RTCBQ9Y3I0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.55■■■■□ 3.28
RTCBQ9Y3I0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
RTCBQ9Y3I0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.54■■■■□ 3.28
RTCBQ9Y3I0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC35.52■■■■□ 3.28
RTCBQ9Y3I0 HLA-V-202ENST00000446817 847 ntBASIC35.51■■■■□ 3.28
RTCBQ9Y3I0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC35.51■■■■□ 3.28
RTCBQ9Y3I0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC35.51■■■■□ 3.28
RTCBQ9Y3I0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
RTCBQ9Y3I0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.51■■■■□ 3.28
RTCBQ9Y3I0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.51■■■■□ 3.28
RTCBQ9Y3I0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
RTCBQ9Y3I0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
RTCBQ9Y3I0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.49■■■■□ 3.27
RTCBQ9Y3I0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC35.49■■■■□ 3.27
RTCBQ9Y3I0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
RTCBQ9Y3I0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
RTCBQ9Y3I0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.45■■■■□ 3.27
RTCBQ9Y3I0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
RTCBQ9Y3I0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
RTCBQ9Y3I0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.4■■■■□ 3.26
RTCBQ9Y3I0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
RTCBQ9Y3I0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
RTCBQ9Y3I0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC35.38■■■■□ 3.25
RTCBQ9Y3I0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC35.38■■■■□ 3.25
RTCBQ9Y3I0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.38■■■■□ 3.25
RTCBQ9Y3I0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC35.37■■■■□ 3.25
RTCBQ9Y3I0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
RTCBQ9Y3I0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC35.36■■■■□ 3.25
RTCBQ9Y3I0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC35.35■■■■□ 3.25
RTCBQ9Y3I0 ZNRF2P2-203ENST00000454624 420 ntBASIC35.35■■■■□ 3.25
RTCBQ9Y3I0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.35■■■■□ 3.25
RTCBQ9Y3I0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
RTCBQ9Y3I0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
RTCBQ9Y3I0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
RTCBQ9Y3I0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.3■■■■□ 3.24
RTCBQ9Y3I0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.28■■■■□ 3.24
RTCBQ9Y3I0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35.24■■■■□ 3.23
RTCBQ9Y3I0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
RTCBQ9Y3I0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.23■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms