Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
LCE3DQ9BYE3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
LCE3DQ9BYE3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LCE3DQ9BYE3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
LCE3DQ9BYE3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC7.52□□□□□ -1.21
LCE3DQ9BYE3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC7.51□□□□□ -1.21
LCE3DQ9BYE3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LCE3DQ9BYE3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LCE3DQ9BYE3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LCE3DQ9BYE3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LCE3DQ9BYE3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
LCE3DQ9BYE3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LCE3DQ9BYE3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LCE3DQ9BYE3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LCE3DQ9BYE3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCE3DQ9BYE3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC7.48□□□□□ -1.21
LCE3DQ9BYE3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCE3DQ9BYE3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCE3DQ9BYE3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCE3DQ9BYE3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCE3DQ9BYE3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LCE3DQ9BYE3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCE3DQ9BYE3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC7.47□□□□□ -1.21
LCE3DQ9BYE3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCE3DQ9BYE3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCE3DQ9BYE3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LCE3DQ9BYE3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
LCE3DQ9BYE3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
LCE3DQ9BYE3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LCE3DQ9BYE3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LCE3DQ9BYE3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
LCE3DQ9BYE3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LCE3DQ9BYE3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LCE3DQ9BYE3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LCE3DQ9BYE3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LCE3DQ9BYE3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
LCE3DQ9BYE3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LCE3DQ9BYE3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LCE3DQ9BYE3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LCE3DQ9BYE3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LCE3DQ9BYE3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC7.44□□□□□ -1.22
LCE3DQ9BYE3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LCE3DQ9BYE3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC7.44□□□□□ -1.22
LCE3DQ9BYE3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LCE3DQ9BYE3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LCE3DQ9BYE3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LCE3DQ9BYE3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LCE3DQ9BYE3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LCE3DQ9BYE3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LCE3DQ9BYE3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LCE3DQ9BYE3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LCE3DQ9BYE3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LCE3DQ9BYE3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 AL161658.1-201ENST00000623641 1967 ntBASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LCE3DQ9BYE3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
LCE3DQ9BYE3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LCE3DQ9BYE3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
LCE3DQ9BYE3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LCE3DQ9BYE3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
LCE3DQ9BYE3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LCE3DQ9BYE3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
LCE3DQ9BYE3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LCE3DQ9BYE3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LCE3DQ9BYE3 ABCB10P1-201ENST00000614297 2181 ntBASIC7.39□□□□□ -1.23
LCE3DQ9BYE3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LCE3DQ9BYE3 ABCB10P3-201ENST00000561950 2166 ntBASIC7.38□□□□□ -1.23
LCE3DQ9BYE3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LCE3DQ9BYE3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LCE3DQ9BYE3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC7.38□□□□□ -1.23
LCE3DQ9BYE3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
LCE3DQ9BYE3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC7.36□□□□□ -1.23
LCE3DQ9BYE3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
LCE3DQ9BYE3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LCE3DQ9BYE3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LCE3DQ9BYE3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LCE3DQ9BYE3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
LCE3DQ9BYE3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms