Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD1Q96BP2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHCHD1Q96BP2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHCHD1Q96BP2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CHCHD1Q96BP2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHCHD1Q96BP2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.49■□□□□ 0.87
CHCHD1Q96BP2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHCHD1Q96BP2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.48■□□□□ 0.87
CHCHD1Q96BP2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHCHD1Q96BP2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHCHD1Q96BP2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.46■□□□□ 0.87
CHCHD1Q96BP2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHCHD1Q96BP2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHCHD1Q96BP2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHCHD1Q96BP2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHCHD1Q96BP2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHCHD1Q96BP2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHCHD1Q96BP2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CHCHD1Q96BP2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHCHD1Q96BP2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CHCHD1Q96BP2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHCHD1Q96BP2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHCHD1Q96BP2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHCHD1Q96BP2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHCHD1Q96BP2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHCHD1Q96BP2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHCHD1Q96BP2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.35■□□□□ 0.85
CHCHD1Q96BP2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CHCHD1Q96BP2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.34■□□□□ 0.85
CHCHD1Q96BP2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHCHD1Q96BP2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHCHD1Q96BP2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CHCHD1Q96BP2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHCHD1Q96BP2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHCHD1Q96BP2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHCHD1Q96BP2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHCHD1Q96BP2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHCHD1Q96BP2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHCHD1Q96BP2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHCHD1Q96BP2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHCHD1Q96BP2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHCHD1Q96BP2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.26■□□□□ 0.83
CHCHD1Q96BP2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHCHD1Q96BP2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.24■□□□□ 0.83
CHCHD1Q96BP2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHCHD1Q96BP2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHCHD1Q96BP2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHCHD1Q96BP2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHCHD1Q96BP2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHCHD1Q96BP2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHCHD1Q96BP2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHCHD1Q96BP2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHCHD1Q96BP2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHCHD1Q96BP2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.21■□□□□ 0.83
CHCHD1Q96BP2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CHCHD1Q96BP2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHCHD1Q96BP2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHCHD1Q96BP2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.19■□□□□ 0.82
CHCHD1Q96BP2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHCHD1Q96BP2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHCHD1Q96BP2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.18■□□□□ 0.82
CHCHD1Q96BP2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.18■□□□□ 0.82
CHCHD1Q96BP2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHCHD1Q96BP2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHCHD1Q96BP2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHCHD1Q96BP2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHCHD1Q96BP2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHCHD1Q96BP2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHCHD1Q96BP2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHCHD1Q96BP2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHCHD1Q96BP2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHCHD1Q96BP2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHCHD1Q96BP2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.11■□□□□ 0.81
CHCHD1Q96BP2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHCHD1Q96BP2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.1■□□□□ 0.81
CHCHD1Q96BP2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHCHD1Q96BP2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHCHD1Q96BP2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHCHD1Q96BP2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.09■□□□□ 0.81
CHCHD1Q96BP2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHCHD1Q96BP2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHCHD1Q96BP2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.06■□□□□ 0.8
CHCHD1Q96BP2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHCHD1Q96BP2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHCHD1Q96BP2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHCHD1Q96BP2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHCHD1Q96BP2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHCHD1Q96BP2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CHCHD1Q96BP2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHCHD1Q96BP2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.02■□□□□ 0.8
CHCHD1Q96BP2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.02■□□□□ 0.8
CHCHD1Q96BP2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CHCHD1Q96BP2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.02■□□□□ 0.79
CHCHD1Q96BP2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHCHD1Q96BP2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHCHD1Q96BP2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHCHD1Q96BP2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CHCHD1Q96BP2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CHCHD1Q96BP2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHCHD1Q96BP2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms