Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00304Q8N9R0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00304Q8N9R0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LINC00304Q8N9R0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00304Q8N9R0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.21■□□□□ 0.19
LINC00304Q8N9R0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00304Q8N9R0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LINC00304Q8N9R0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
LINC00304Q8N9R0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00304Q8N9R0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LINC00304Q8N9R0 SETD8P1-201ENST00000623146 1180 ntBASIC16.18■□□□□ 0.18
LINC00304Q8N9R0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00304Q8N9R0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00304Q8N9R0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00304Q8N9R0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00304Q8N9R0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00304Q8N9R0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00304Q8N9R0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00304Q8N9R0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00304Q8N9R0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00304Q8N9R0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00304Q8N9R0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00304Q8N9R0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00304Q8N9R0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00304Q8N9R0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00304Q8N9R0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LINC00304Q8N9R0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00304Q8N9R0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00304Q8N9R0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00304Q8N9R0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00304Q8N9R0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00304Q8N9R0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINC00304Q8N9R0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00304Q8N9R0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00304Q8N9R0 AC097358.2-201ENST00000607541 1159 ntBASIC16.09■□□□□ 0.17
LINC00304Q8N9R0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LINC00304Q8N9R0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC00304Q8N9R0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00304Q8N9R0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00304Q8N9R0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LINC00304Q8N9R0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00304Q8N9R0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00304Q8N9R0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00304Q8N9R0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC16.05■□□□□ 0.16
LINC00304Q8N9R0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC16.05■□□□□ 0.16
LINC00304Q8N9R0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00304Q8N9R0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00304Q8N9R0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00304Q8N9R0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00304Q8N9R0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00304Q8N9R0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00304Q8N9R0 AL133380.1-201ENST00000506013 324 ntBASIC16.02■□□□□ 0.16
LINC00304Q8N9R0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.02■□□□□ 0.16
LINC00304Q8N9R0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00304Q8N9R0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00304Q8N9R0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00304Q8N9R0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LINC00304Q8N9R0 AC136428.2-201ENST00000563187 214 ntBASIC16.01■□□□□ 0.15
LINC00304Q8N9R0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LINC00304Q8N9R0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC00304Q8N9R0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC16■□□□□ 0.15
LINC00304Q8N9R0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00304Q8N9R0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC00304Q8N9R0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00304Q8N9R0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00304Q8N9R0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00304Q8N9R0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC00304Q8N9R0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00304Q8N9R0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC00304Q8N9R0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00304Q8N9R0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00304Q8N9R0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LINC00304Q8N9R0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC00304Q8N9R0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00304Q8N9R0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00304Q8N9R0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00304Q8N9R0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC15.94■□□□□ 0.14
LINC00304Q8N9R0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00304Q8N9R0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC00304Q8N9R0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00304Q8N9R0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00304Q8N9R0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00304Q8N9R0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00304Q8N9R0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
LINC00304Q8N9R0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00304Q8N9R0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00304Q8N9R0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00304Q8N9R0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC00304Q8N9R0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00304Q8N9R0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00304Q8N9R0 AL391121.1-201ENST00000607967 1349 ntBASIC15.9■□□□□ 0.14
LINC00304Q8N9R0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00304Q8N9R0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00304Q8N9R0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00304Q8N9R0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00304Q8N9R0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC00304Q8N9R0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00304Q8N9R0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC15.87■□□□□ 0.13
LINC00304Q8N9R0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00304Q8N9R0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms