Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMEFF1Q8IYR6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.13■■■□□ 2.09
TMEFF1Q8IYR6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMEFF1Q8IYR6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
TMEFF1Q8IYR6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEFF1Q8IYR6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEFF1Q8IYR6 AL133380.1-201ENST00000506013 324 ntBASIC28.11■■■□□ 2.09
TMEFF1Q8IYR6 AP006261.1-201ENST00000584783 668 ntBASIC28.1■■■□□ 2.09
TMEFF1Q8IYR6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.08■■■□□ 2.09
TMEFF1Q8IYR6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TMEFF1Q8IYR6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TMEFF1Q8IYR6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
TMEFF1Q8IYR6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.03■■■□□ 2.08
TMEFF1Q8IYR6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
TMEFF1Q8IYR6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
TMEFF1Q8IYR6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
TMEFF1Q8IYR6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.01■■■□□ 2.07
TMEFF1Q8IYR6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEFF1Q8IYR6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
TMEFF1Q8IYR6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.99■■■□□ 2.07
TMEFF1Q8IYR6 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.99■■■□□ 2.07
TMEFF1Q8IYR6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
TMEFF1Q8IYR6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.96■■■□□ 2.07
TMEFF1Q8IYR6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
TMEFF1Q8IYR6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.95■■■□□ 2.06
TMEFF1Q8IYR6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.95■■■□□ 2.06
TMEFF1Q8IYR6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
TMEFF1Q8IYR6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.93■■■□□ 2.06
TMEFF1Q8IYR6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
TMEFF1Q8IYR6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
TMEFF1Q8IYR6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEFF1Q8IYR6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.88■■■□□ 2.05
TMEFF1Q8IYR6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.88■■■□□ 2.05
TMEFF1Q8IYR6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.87■■■□□ 2.05
TMEFF1Q8IYR6 MIR3665-201ENST00000578708 105 ntBASIC27.86■■■□□ 2.05
TMEFF1Q8IYR6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
TMEFF1Q8IYR6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.84■■■□□ 2.05
TMEFF1Q8IYR6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
TMEFF1Q8IYR6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
TMEFF1Q8IYR6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.83■■■□□ 2.05
TMEFF1Q8IYR6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
TMEFF1Q8IYR6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
TMEFF1Q8IYR6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TMEFF1Q8IYR6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMEFF1Q8IYR6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.78■■■□□ 2.04
TMEFF1Q8IYR6 ABHD17AP4-201ENST00000411545 909 ntBASIC27.78■■■□□ 2.04
TMEFF1Q8IYR6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.77■■■□□ 2.04
TMEFF1Q8IYR6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TMEFF1Q8IYR6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TMEFF1Q8IYR6 MIR7108-201ENST00000614319 87 ntBASIC27.76■■■□□ 2.03
TMEFF1Q8IYR6 AC087741.3-201ENST00000624270 1347 ntBASIC27.75■■■□□ 2.03
TMEFF1Q8IYR6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TMEFF1Q8IYR6 DUX4L28-201ENST00000623687 678 ntBASIC27.74■■■□□ 2.03
TMEFF1Q8IYR6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TMEFF1Q8IYR6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
TMEFF1Q8IYR6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.73■■■□□ 2.03
TMEFF1Q8IYR6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TMEFF1Q8IYR6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.72■■■□□ 2.03
TMEFF1Q8IYR6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
TMEFF1Q8IYR6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEFF1Q8IYR6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEFF1Q8IYR6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
TMEFF1Q8IYR6 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.71■■■□□ 2.03
TMEFF1Q8IYR6 MIR762-201ENST00000390236 83 ntBASIC27.7■■■□□ 2.02
TMEFF1Q8IYR6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TMEFF1Q8IYR6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.68■■■□□ 2.02
TMEFF1Q8IYR6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.67■■■□□ 2.02
TMEFF1Q8IYR6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TMEFF1Q8IYR6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.66■■■□□ 2.02
TMEFF1Q8IYR6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
TMEFF1Q8IYR6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
TMEFF1Q8IYR6 AC005559.1-201ENST00000589661 871 ntBASIC27.65■■■□□ 2.02
TMEFF1Q8IYR6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEFF1Q8IYR6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEFF1Q8IYR6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.64■■■□□ 2.02
TMEFF1Q8IYR6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TMEFF1Q8IYR6 AC044849.2-201ENST00000606596 710 ntBASIC27.63■■■□□ 2.01
TMEFF1Q8IYR6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.6■■■□□ 2.01
TMEFF1Q8IYR6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.6■■■□□ 2.01
TMEFF1Q8IYR6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.59■■■□□ 2.01
TMEFF1Q8IYR6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.58■■■□□ 2.01
TMEFF1Q8IYR6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.58■■■□□ 2.01
TMEFF1Q8IYR6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEFF1Q8IYR6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMEFF1Q8IYR6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
TMEFF1Q8IYR6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
TMEFF1Q8IYR6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.55■■■□□ 2
TMEFF1Q8IYR6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMEFF1Q8IYR6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.55■■■□□ 2
TMEFF1Q8IYR6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TMEFF1Q8IYR6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEFF1Q8IYR6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.53■■■□□ 2
TMEFF1Q8IYR6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.51■■□□□ 1.99
TMEFF1Q8IYR6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
TMEFF1Q8IYR6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
TMEFF1Q8IYR6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.5■■□□□ 1.99
TMEFF1Q8IYR6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.49■■□□□ 1.99
TMEFF1Q8IYR6 HLA-V-202ENST00000446817 847 ntBASIC27.48■■□□□ 1.99
TMEFF1Q8IYR6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.47■■□□□ 1.99
TMEFF1Q8IYR6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms