Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
SLX4Q8IY92 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.13■■■■□ 3.21
SLX4Q8IY92 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
SLX4Q8IY92 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC35.12■■■■□ 3.21
SLX4Q8IY92 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
SLX4Q8IY92 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
SLX4Q8IY92 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.09■■■■□ 3.21
SLX4Q8IY92 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.07■■■■□ 3.2
SLX4Q8IY92 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
SLX4Q8IY92 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC35.06■■■■□ 3.2
SLX4Q8IY92 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
SLX4Q8IY92 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC35.03■■■■□ 3.2
SLX4Q8IY92 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.19
SLX4Q8IY92 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
SLX4Q8IY92 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SLX4Q8IY92 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.94■■■■□ 3.18
SLX4Q8IY92 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.92■■■■□ 3.18
SLX4Q8IY92 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
SLX4Q8IY92 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.9■■■■□ 3.18
SLX4Q8IY92 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.88■■■■□ 3.17
SLX4Q8IY92 DUX4L28-201ENST00000623687 678 ntBASIC34.88■■■■□ 3.17
SLX4Q8IY92 MIR7108-201ENST00000614319 87 ntBASIC34.87■■■■□ 3.17
SLX4Q8IY92 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
SLX4Q8IY92 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.85■■■■□ 3.17
SLX4Q8IY92 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SLX4Q8IY92 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
SLX4Q8IY92 MIR3665-201ENST00000578708 105 ntBASIC34.83■■■■□ 3.17
SLX4Q8IY92 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
SLX4Q8IY92 AC087741.3-201ENST00000624270 1347 ntBASIC34.81■■■■□ 3.16
SLX4Q8IY92 ABHD17AP4-201ENST00000411545 909 ntBASIC34.81■■■■□ 3.16
SLX4Q8IY92 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
SLX4Q8IY92 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.79■■■■□ 3.16
SLX4Q8IY92 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SLX4Q8IY92 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SLX4Q8IY92 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.77■■■■□ 3.16
SLX4Q8IY92 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.77■■■■□ 3.16
SLX4Q8IY92 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.76■■■■□ 3.15
SLX4Q8IY92 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.75■■■■□ 3.15
SLX4Q8IY92 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.7■■■■□ 3.15
SLX4Q8IY92 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
SLX4Q8IY92 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
SLX4Q8IY92 AC044849.2-201ENST00000606596 710 ntBASIC34.69■■■■□ 3.14
SLX4Q8IY92 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
SLX4Q8IY92 PVT1-219ENST00000523427 938 ntTSL 3 BASIC34.67■■■■□ 3.14
SLX4Q8IY92 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.66■■■■□ 3.14
SLX4Q8IY92 HLA-V-202ENST00000446817 847 ntBASIC34.65■■■■□ 3.14
SLX4Q8IY92 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SLX4Q8IY92 MIR762-201ENST00000390236 83 ntBASIC34.6■■■■□ 3.13
SLX4Q8IY92 AC005559.1-201ENST00000589661 871 ntBASIC34.6■■■■□ 3.13
SLX4Q8IY92 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.6■■■■□ 3.13
SLX4Q8IY92 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
SLX4Q8IY92 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
SLX4Q8IY92 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC34.58■■■■□ 3.13
SLX4Q8IY92 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
SLX4Q8IY92 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.58■■■■□ 3.13
SLX4Q8IY92 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC34.57■■■■□ 3.12
SLX4Q8IY92 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.56■■■■□ 3.12
SLX4Q8IY92 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
SLX4Q8IY92 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC34.54■■■■□ 3.12
SLX4Q8IY92 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SLX4Q8IY92 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SLX4Q8IY92 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
SLX4Q8IY92 MBP-237ENST00000579129 1052 ntTSL 5 BASIC34.48■■■■□ 3.11
SLX4Q8IY92 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC34.48■■■■□ 3.11
SLX4Q8IY92 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC34.47■■■■□ 3.11
SLX4Q8IY92 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC34.46■■■■□ 3.11
SLX4Q8IY92 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
SLX4Q8IY92 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SLX4Q8IY92 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC34.44■■■■□ 3.1
SLX4Q8IY92 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
SLX4Q8IY92 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
SLX4Q8IY92 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
SLX4Q8IY92 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34.4■■■■□ 3.1
SLX4Q8IY92 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC34.4■■■■□ 3.1
SLX4Q8IY92 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.37■■■■□ 3.09
SLX4Q8IY92 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC34.37■■■■□ 3.09
SLX4Q8IY92 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC34.37■■■■□ 3.09
SLX4Q8IY92 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
SLX4Q8IY92 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC34.36■■■■□ 3.09
SLX4Q8IY92 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SLX4Q8IY92 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
SLX4Q8IY92 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SLX4Q8IY92 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC34.33■■■■□ 3.09
SLX4Q8IY92 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.32■■■■□ 3.08
SLX4Q8IY92 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
SLX4Q8IY92 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
SLX4Q8IY92 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
SLX4Q8IY92 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
SLX4Q8IY92 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SLX4Q8IY92 BOD1-206ENST00000480951 814 ntTSL 2 BASIC34.29■■■■□ 3.08
SLX4Q8IY92 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
SLX4Q8IY92 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
SLX4Q8IY92 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SLX4Q8IY92 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SLX4Q8IY92 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC34.25■■■■□ 3.07
SLX4Q8IY92 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.24■■■■□ 3.07
SLX4Q8IY92 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC34.23■■■■□ 3.07
SLX4Q8IY92 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SLX4Q8IY92 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
SLX4Q8IY92 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms