Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
DDX60Q8IY21 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.1■■■■□ 3.21
DDX60Q8IY21 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
DDX60Q8IY21 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
DDX60Q8IY21 CAHM-201ENST00000604200 896 ntBASIC35.09■■■■□ 3.21
DDX60Q8IY21 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC35.06■■■■□ 3.2
DDX60Q8IY21 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.06■■■■□ 3.2
DDX60Q8IY21 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
DDX60Q8IY21 AL391121.1-201ENST00000607967 1349 ntBASIC35.06■■■■□ 3.2
DDX60Q8IY21 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
DDX60Q8IY21 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
DDX60Q8IY21 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
DDX60Q8IY21 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
DDX60Q8IY21 RPS2P35-201ENST00000443417 897 ntBASIC35.03■■■■□ 3.2
DDX60Q8IY21 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
DDX60Q8IY21 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC35.02■■■■□ 3.2
DDX60Q8IY21 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.02■■■■□ 3.2
DDX60Q8IY21 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
DDX60Q8IY21 AL162393.1-201ENST00000437852 946 ntBASIC35■■■■□ 3.19
DDX60Q8IY21 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.99■■■■□ 3.19
DDX60Q8IY21 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC34.99■■■■□ 3.19
DDX60Q8IY21 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
DDX60Q8IY21 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
DDX60Q8IY21 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
DDX60Q8IY21 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
DDX60Q8IY21 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
DDX60Q8IY21 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
DDX60Q8IY21 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.89■■■■□ 3.18
DDX60Q8IY21 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.89■■■■□ 3.18
DDX60Q8IY21 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC34.88■■■■□ 3.17
DDX60Q8IY21 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
DDX60Q8IY21 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
DDX60Q8IY21 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.83■■■■□ 3.17
DDX60Q8IY21 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
DDX60Q8IY21 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.81■■■■□ 3.16
DDX60Q8IY21 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
DDX60Q8IY21 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC34.79■■■■□ 3.16
DDX60Q8IY21 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.78■■■■□ 3.16
DDX60Q8IY21 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.78■■■■□ 3.16
DDX60Q8IY21 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.77■■■■□ 3.16
DDX60Q8IY21 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
DDX60Q8IY21 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
DDX60Q8IY21 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
DDX60Q8IY21 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.7■■■■□ 3.15
DDX60Q8IY21 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.69■■■■□ 3.14
DDX60Q8IY21 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
DDX60Q8IY21 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
DDX60Q8IY21 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
DDX60Q8IY21 AP006261.1-201ENST00000584783 668 ntBASIC34.63■■■■□ 3.13
DDX60Q8IY21 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.61■■■■□ 3.13
DDX60Q8IY21 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
DDX60Q8IY21 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
DDX60Q8IY21 DUX4L28-201ENST00000623687 678 ntBASIC34.57■■■■□ 3.12
DDX60Q8IY21 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
DDX60Q8IY21 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
DDX60Q8IY21 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
DDX60Q8IY21 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.52■■■■□ 3.12
DDX60Q8IY21 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
DDX60Q8IY21 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
DDX60Q8IY21 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
DDX60Q8IY21 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC34.49■■■■□ 3.11
DDX60Q8IY21 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
DDX60Q8IY21 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.49■■■■□ 3.11
DDX60Q8IY21 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.49■■■■□ 3.11
DDX60Q8IY21 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
DDX60Q8IY21 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
DDX60Q8IY21 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
DDX60Q8IY21 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.47■■■■□ 3.11
DDX60Q8IY21 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
DDX60Q8IY21 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
DDX60Q8IY21 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
DDX60Q8IY21 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34.41■■■■□ 3.1
DDX60Q8IY21 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
DDX60Q8IY21 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
DDX60Q8IY21 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
DDX60Q8IY21 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
DDX60Q8IY21 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
DDX60Q8IY21 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
DDX60Q8IY21 MIR3665-201ENST00000578708 105 ntBASIC34.38■■■■□ 3.09
DDX60Q8IY21 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
DDX60Q8IY21 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
DDX60Q8IY21 AC087741.3-201ENST00000624270 1347 ntBASIC34.37■■■■□ 3.09
DDX60Q8IY21 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.36■■■■□ 3.09
DDX60Q8IY21 MIR762-201ENST00000390236 83 ntBASIC34.36■■■■□ 3.09
DDX60Q8IY21 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
DDX60Q8IY21 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.35■■■■□ 3.09
DDX60Q8IY21 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.35■■■■□ 3.09
DDX60Q8IY21 AC005559.1-201ENST00000589661 871 ntBASIC34.35■■■■□ 3.09
DDX60Q8IY21 WASH5P-204ENST00000632292 975 ntBASIC34.33■■■■□ 3.09
DDX60Q8IY21 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
DDX60Q8IY21 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC34.32■■■■□ 3.08
DDX60Q8IY21 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
DDX60Q8IY21 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
DDX60Q8IY21 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.28■■■■□ 3.08
DDX60Q8IY21 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.28■■■■□ 3.08
DDX60Q8IY21 AC044849.2-201ENST00000606596 710 ntBASIC34.27■■■■□ 3.08
DDX60Q8IY21 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.24■■■■□ 3.07
DDX60Q8IY21 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.23■■■■□ 3.07
DDX60Q8IY21 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
DDX60Q8IY21 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms