Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SFTPA1Q8IWL2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.69■■■□□ 2.18
SFTPA1Q8IWL2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
SFTPA1Q8IWL2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SFTPA1Q8IWL2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SFTPA1Q8IWL2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SFTPA1Q8IWL2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SFTPA1Q8IWL2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
SFTPA1Q8IWL2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
SFTPA1Q8IWL2 AL133380.1-201ENST00000506013 324 ntBASIC28.62■■■□□ 2.17
SFTPA1Q8IWL2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SFTPA1Q8IWL2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.61■■■□□ 2.17
SFTPA1Q8IWL2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SFTPA1Q8IWL2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SFTPA1Q8IWL2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.58■■■□□ 2.17
SFTPA1Q8IWL2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SFTPA1Q8IWL2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.56■■■□□ 2.16
SFTPA1Q8IWL2 AL391121.1-201ENST00000607967 1349 ntBASIC28.56■■■□□ 2.16
SFTPA1Q8IWL2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.56■■■□□ 2.16
SFTPA1Q8IWL2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SFTPA1Q8IWL2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.54■■■□□ 2.16
SFTPA1Q8IWL2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.53■■■□□ 2.16
SFTPA1Q8IWL2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
SFTPA1Q8IWL2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SFTPA1Q8IWL2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SFTPA1Q8IWL2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SFTPA1Q8IWL2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.45■■■□□ 2.14
SFTPA1Q8IWL2 AL162393.1-201ENST00000437852 946 ntBASIC28.43■■■□□ 2.14
SFTPA1Q8IWL2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SFTPA1Q8IWL2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.41■■■□□ 2.14
SFTPA1Q8IWL2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
SFTPA1Q8IWL2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SFTPA1Q8IWL2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.39■■■□□ 2.14
SFTPA1Q8IWL2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SFTPA1Q8IWL2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
SFTPA1Q8IWL2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SFTPA1Q8IWL2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SFTPA1Q8IWL2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SFTPA1Q8IWL2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.34■■■□□ 2.13
SFTPA1Q8IWL2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SFTPA1Q8IWL2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.34■■■□□ 2.13
SFTPA1Q8IWL2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
SFTPA1Q8IWL2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.33■■■□□ 2.13
SFTPA1Q8IWL2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.33■■■□□ 2.12
SFTPA1Q8IWL2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SFTPA1Q8IWL2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SFTPA1Q8IWL2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SFTPA1Q8IWL2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SFTPA1Q8IWL2 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.26■■■□□ 2.11
SFTPA1Q8IWL2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SFTPA1Q8IWL2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
SFTPA1Q8IWL2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.24■■■□□ 2.11
SFTPA1Q8IWL2 AP006261.1-201ENST00000584783 668 ntBASIC28.24■■■□□ 2.11
SFTPA1Q8IWL2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SFTPA1Q8IWL2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SFTPA1Q8IWL2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SFTPA1Q8IWL2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SFTPA1Q8IWL2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.2■■■□□ 2.1
SFTPA1Q8IWL2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SFTPA1Q8IWL2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
SFTPA1Q8IWL2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SFTPA1Q8IWL2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.17■■■□□ 2.1
SFTPA1Q8IWL2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.16■■■□□ 2.1
SFTPA1Q8IWL2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
SFTPA1Q8IWL2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
SFTPA1Q8IWL2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
SFTPA1Q8IWL2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SFTPA1Q8IWL2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
SFTPA1Q8IWL2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SFTPA1Q8IWL2 DUX4L28-201ENST00000623687 678 ntBASIC28.11■■■□□ 2.09
SFTPA1Q8IWL2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.1■■■□□ 2.09
SFTPA1Q8IWL2 MIR762-201ENST00000390236 83 ntBASIC28.09■■■□□ 2.09
SFTPA1Q8IWL2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SFTPA1Q8IWL2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
SFTPA1Q8IWL2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SFTPA1Q8IWL2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SFTPA1Q8IWL2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.07■■■□□ 2.08
SFTPA1Q8IWL2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SFTPA1Q8IWL2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.06■■■□□ 2.08
SFTPA1Q8IWL2 MIR3665-201ENST00000578708 105 ntBASIC28.06■■■□□ 2.08
SFTPA1Q8IWL2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
SFTPA1Q8IWL2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.05■■■□□ 2.08
SFTPA1Q8IWL2 AC087741.3-201ENST00000624270 1347 ntBASIC28.05■■■□□ 2.08
SFTPA1Q8IWL2 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.04■■■□□ 2.08
SFTPA1Q8IWL2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SFTPA1Q8IWL2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SFTPA1Q8IWL2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SFTPA1Q8IWL2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SFTPA1Q8IWL2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.99■■■□□ 2.07
SFTPA1Q8IWL2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.99■■■□□ 2.07
SFTPA1Q8IWL2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SFTPA1Q8IWL2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
SFTPA1Q8IWL2 WASH5P-204ENST00000632292 975 ntBASIC27.98■■■□□ 2.07
SFTPA1Q8IWL2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SFTPA1Q8IWL2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.96■■■□□ 2.07
SFTPA1Q8IWL2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
SFTPA1Q8IWL2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.96■■■□□ 2.07
SFTPA1Q8IWL2 AC005559.1-201ENST00000589661 871 ntBASIC27.96■■■□□ 2.07
SFTPA1Q8IWL2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.95■■■□□ 2.06
SFTPA1Q8IWL2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms