Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC087741.3-201ENST00000624270 1347 ntBASIC24.38■■□□□ 1.49
CSMD2Q7Z408 AC145285.7-201ENST00000614819 1539 ntBASIC24.37■■□□□ 1.49
CSMD2Q7Z408 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.36■■□□□ 1.49
CSMD2Q7Z408 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CSMD2Q7Z408 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CSMD2Q7Z408 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CSMD2Q7Z408 MIR3665-201ENST00000578708 105 ntBASIC24.3■■□□□ 1.48
CSMD2Q7Z408 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.29■■□□□ 1.48
CSMD2Q7Z408 DUX4L28-201ENST00000623687 678 ntBASIC24.28■■□□□ 1.48
CSMD2Q7Z408 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CSMD2Q7Z408 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CSMD2Q7Z408 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CSMD2Q7Z408 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.25■■□□□ 1.47
CSMD2Q7Z408 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.24■■□□□ 1.47
CSMD2Q7Z408 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSMD2Q7Z408 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.24■■□□□ 1.47
CSMD2Q7Z408 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSMD2Q7Z408 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.23■■□□□ 1.47
CSMD2Q7Z408 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.23■■□□□ 1.47
CSMD2Q7Z408 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CSMD2Q7Z408 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSMD2Q7Z408 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
CSMD2Q7Z408 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.2■■□□□ 1.46
CSMD2Q7Z408 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSMD2Q7Z408 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSMD2Q7Z408 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.19■■□□□ 1.46
CSMD2Q7Z408 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSMD2Q7Z408 AL133380.1-201ENST00000506013 324 ntBASIC24.18■■□□□ 1.46
CSMD2Q7Z408 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CSMD2Q7Z408 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.17■■□□□ 1.46
CSMD2Q7Z408 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CSMD2Q7Z408 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.16■■□□□ 1.46
CSMD2Q7Z408 AC044849.2-201ENST00000606596 710 ntBASIC24.15■■□□□ 1.46
CSMD2Q7Z408 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.15■■□□□ 1.46
CSMD2Q7Z408 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.14■■□□□ 1.46
CSMD2Q7Z408 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CSMD2Q7Z408 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CSMD2Q7Z408 MIR4449-201ENST00000578365 66 ntBASIC24.12■■□□□ 1.45
CSMD2Q7Z408 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSMD2Q7Z408 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CSMD2Q7Z408 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.09■■□□□ 1.45
CSMD2Q7Z408 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSMD2Q7Z408 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CSMD2Q7Z408 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSMD2Q7Z408 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.08■■□□□ 1.44
CSMD2Q7Z408 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.08■■□□□ 1.44
CSMD2Q7Z408 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.08■■□□□ 1.44
CSMD2Q7Z408 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.06■■□□□ 1.44
CSMD2Q7Z408 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CSMD2Q7Z408 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.05■■□□□ 1.44
CSMD2Q7Z408 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.05■■□□□ 1.44
CSMD2Q7Z408 MIR762-201ENST00000390236 83 ntBASIC24.04■■□□□ 1.44
CSMD2Q7Z408 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CSMD2Q7Z408 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CSMD2Q7Z408 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CSMD2Q7Z408 AC005559.1-201ENST00000589661 871 ntBASIC24.01■■□□□ 1.43
CSMD2Q7Z408 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24■■□□□ 1.43
CSMD2Q7Z408 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CSMD2Q7Z408 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CSMD2Q7Z408 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.95■■□□□ 1.42
CSMD2Q7Z408 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSMD2Q7Z408 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.94■■□□□ 1.42
CSMD2Q7Z408 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.94■■□□□ 1.42
CSMD2Q7Z408 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSMD2Q7Z408 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSMD2Q7Z408 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CSMD2Q7Z408 ZNRF2P2-203ENST00000454624 420 ntBASIC23.91■■□□□ 1.42
CSMD2Q7Z408 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CSMD2Q7Z408 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSMD2Q7Z408 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CSMD2Q7Z408 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.89■■□□□ 1.41
CSMD2Q7Z408 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.88■■□□□ 1.41
CSMD2Q7Z408 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CSMD2Q7Z408 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CSMD2Q7Z408 HSD17B1P1-201ENST00000590052 955 ntBASIC23.88■■□□□ 1.41
CSMD2Q7Z408 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.86■■□□□ 1.41
CSMD2Q7Z408 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSMD2Q7Z408 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.85■■□□□ 1.41
CSMD2Q7Z408 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CSMD2Q7Z408 MIR639-201ENST00000384974 98 ntBASIC23.83■■□□□ 1.41
CSMD2Q7Z408 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.79■■□□□ 1.4
CSMD2Q7Z408 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CSMD2Q7Z408 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.79■■□□□ 1.4
CSMD2Q7Z408 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSMD2Q7Z408 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CSMD2Q7Z408 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSMD2Q7Z408 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.77■■□□□ 1.4
CSMD2Q7Z408 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSMD2Q7Z408 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSMD2Q7Z408 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.74■■□□□ 1.39
CSMD2Q7Z408 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSMD2Q7Z408 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.72■■□□□ 1.39
CSMD2Q7Z408 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.72■■□□□ 1.39
CSMD2Q7Z408 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CSMD2Q7Z408 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSMD2Q7Z408 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.71■■□□□ 1.39
CSMD2Q7Z408 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.71■■□□□ 1.39
CSMD2Q7Z408 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSMD2Q7Z408 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSMD2Q7Z408 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms