Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.89■■■□□ 2.54
ATP2A2P16615 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ATP2A2P16615 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.87■■■□□ 2.53
ATP2A2P16615 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ATP2A2P16615 AC145285.7-201ENST00000614819 1539 ntBASIC30.87■■■□□ 2.53
ATP2A2P16615 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ATP2A2P16615 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
ATP2A2P16615 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
ATP2A2P16615 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.84■■■□□ 2.53
ATP2A2P16615 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ATP2A2P16615 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
ATP2A2P16615 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ATP2A2P16615 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
ATP2A2P16615 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.79■■■□□ 2.52
ATP2A2P16615 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ATP2A2P16615 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ATP2A2P16615 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
ATP2A2P16615 AL133380.1-201ENST00000506013 324 ntBASIC30.75■■■□□ 2.51
ATP2A2P16615 MIR7108-201ENST00000614319 87 ntBASIC30.74■■■□□ 2.51
ATP2A2P16615 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ATP2A2P16615 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ATP2A2P16615 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
ATP2A2P16615 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.72■■■□□ 2.51
ATP2A2P16615 ABHD17AP4-201ENST00000411545 909 ntBASIC30.71■■■□□ 2.51
ATP2A2P16615 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
ATP2A2P16615 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ATP2A2P16615 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.7■■■□□ 2.51
ATP2A2P16615 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.69■■■□□ 2.5
ATP2A2P16615 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
ATP2A2P16615 MIR3665-201ENST00000578708 105 ntBASIC30.68■■■□□ 2.5
ATP2A2P16615 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATP2A2P16615 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2A2P16615 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.66■■■□□ 2.5
ATP2A2P16615 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2A2P16615 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.65■■■□□ 2.5
ATP2A2P16615 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.64■■■□□ 2.5
ATP2A2P16615 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ATP2A2P16615 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ATP2A2P16615 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.59■■■□□ 2.49
ATP2A2P16615 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.57■■■□□ 2.48
ATP2A2P16615 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
ATP2A2P16615 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
ATP2A2P16615 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ATP2A2P16615 AC087741.3-201ENST00000624270 1347 ntBASIC30.54■■■□□ 2.48
ATP2A2P16615 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ATP2A2P16615 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.53■■■□□ 2.48
ATP2A2P16615 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ATP2A2P16615 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
ATP2A2P16615 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
ATP2A2P16615 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.51■■■□□ 2.47
ATP2A2P16615 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.49■■■□□ 2.47
ATP2A2P16615 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.49■■■□□ 2.47
ATP2A2P16615 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ATP2A2P16615 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ATP2A2P16615 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
ATP2A2P16615 DUX4L28-201ENST00000623687 678 ntBASIC30.48■■■□□ 2.47
ATP2A2P16615 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ATP2A2P16615 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.46■■■□□ 2.47
ATP2A2P16615 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.44■■■□□ 2.46
ATP2A2P16615 HLA-V-202ENST00000446817 847 ntBASIC30.44■■■□□ 2.46
ATP2A2P16615 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.44■■■□□ 2.46
ATP2A2P16615 AC044849.2-201ENST00000606596 710 ntBASIC30.43■■■□□ 2.46
ATP2A2P16615 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.42■■■□□ 2.46
ATP2A2P16615 MIR762-201ENST00000390236 83 ntBASIC30.38■■■□□ 2.45
ATP2A2P16615 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
ATP2A2P16615 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.38■■■□□ 2.45
ATP2A2P16615 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ATP2A2P16615 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ATP2A2P16615 AC005559.1-201ENST00000589661 871 ntBASIC30.34■■■□□ 2.45
ATP2A2P16615 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATP2A2P16615 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATP2A2P16615 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.32■■■□□ 2.44
ATP2A2P16615 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.32■■■□□ 2.44
ATP2A2P16615 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
ATP2A2P16615 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
ATP2A2P16615 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.31■■■□□ 2.44
ATP2A2P16615 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP2A2P16615 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.3■■■□□ 2.44
ATP2A2P16615 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ATP2A2P16615 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.29■■■□□ 2.44
ATP2A2P16615 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP2A2P16615 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.23■■■□□ 2.43
ATP2A2P16615 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.21■■■□□ 2.43
ATP2A2P16615 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.21■■■□□ 2.43
ATP2A2P16615 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.21■■■□□ 2.43
ATP2A2P16615 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.21■■■□□ 2.43
ATP2A2P16615 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ATP2A2P16615 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.19■■■□□ 2.42
ATP2A2P16615 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.19■■■□□ 2.42
ATP2A2P16615 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ATP2A2P16615 ZNRF2P2-203ENST00000454624 420 ntBASIC30.18■■■□□ 2.42
ATP2A2P16615 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATP2A2P16615 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
ATP2A2P16615 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.17■■■□□ 2.42
ATP2A2P16615 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ATP2A2P16615 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.16■■■□□ 2.42
ATP2A2P16615 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.14■■■□□ 2.42
ATP2A2P16615 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ATP2A2P16615 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.13■■■□□ 2.41
ATP2A2P16615 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms