Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TRABD2BA6NFA1 ABHD17AP4-201ENST00000411545 909 ntBASIC27.16■■□□□ 1.94
TRABD2BA6NFA1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRABD2BA6NFA1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRABD2BA6NFA1 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.11■■□□□ 1.93
TRABD2BA6NFA1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
TRABD2BA6NFA1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
TRABD2BA6NFA1 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.09■■□□□ 1.93
TRABD2BA6NFA1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.07■■□□□ 1.92
TRABD2BA6NFA1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.07■■□□□ 1.92
TRABD2BA6NFA1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRABD2BA6NFA1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRABD2BA6NFA1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
TRABD2BA6NFA1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRABD2BA6NFA1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.04■■□□□ 1.92
TRABD2BA6NFA1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.03■■□□□ 1.92
TRABD2BA6NFA1 AC145285.7-201ENST00000614819 1539 ntBASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 MIR3665-201ENST00000578708 105 ntBASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
TRABD2BA6NFA1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TRABD2BA6NFA1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.99■■□□□ 1.91
TRABD2BA6NFA1 AL133380.1-201ENST00000506013 324 ntBASIC26.99■■□□□ 1.91
TRABD2BA6NFA1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.99■■□□□ 1.91
TRABD2BA6NFA1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.98■■□□□ 1.91
TRABD2BA6NFA1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRABD2BA6NFA1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.97■■□□□ 1.91
TRABD2BA6NFA1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRABD2BA6NFA1 HLA-V-202ENST00000446817 847 ntBASIC26.93■■□□□ 1.9
TRABD2BA6NFA1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.93■■□□□ 1.9
TRABD2BA6NFA1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.92■■□□□ 1.9
TRABD2BA6NFA1 AC087741.3-201ENST00000624270 1347 ntBASIC26.9■■□□□ 1.9
TRABD2BA6NFA1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.89■■□□□ 1.9
TRABD2BA6NFA1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
TRABD2BA6NFA1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRABD2BA6NFA1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRABD2BA6NFA1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.85■■□□□ 1.89
TRABD2BA6NFA1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
TRABD2BA6NFA1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRABD2BA6NFA1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.83■■□□□ 1.89
TRABD2BA6NFA1 DUX4L28-201ENST00000623687 678 ntBASIC26.82■■□□□ 1.88
TRABD2BA6NFA1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TRABD2BA6NFA1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.81■■□□□ 1.88
TRABD2BA6NFA1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TRABD2BA6NFA1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TRABD2BA6NFA1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
TRABD2BA6NFA1 AC044849.2-201ENST00000606596 710 ntBASIC26.78■■□□□ 1.88
TRABD2BA6NFA1 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.75■■□□□ 1.87
TRABD2BA6NFA1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.74■■□□□ 1.87
TRABD2BA6NFA1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRABD2BA6NFA1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.72■■□□□ 1.87
TRABD2BA6NFA1 MIR762-201ENST00000390236 83 ntBASIC26.71■■□□□ 1.87
TRABD2BA6NFA1 AC005559.1-201ENST00000589661 871 ntBASIC26.68■■□□□ 1.86
TRABD2BA6NFA1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.68■■□□□ 1.86
TRABD2BA6NFA1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TRABD2BA6NFA1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRABD2BA6NFA1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.66■■□□□ 1.86
TRABD2BA6NFA1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.66■■□□□ 1.86
TRABD2BA6NFA1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRABD2BA6NFA1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.64■■□□□ 1.86
TRABD2BA6NFA1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 ZNRF2P2-203ENST00000454624 420 ntBASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRABD2BA6NFA1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.62■■□□□ 1.85
TRABD2BA6NFA1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRABD2BA6NFA1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.61■■□□□ 1.85
TRABD2BA6NFA1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.6■■□□□ 1.85
TRABD2BA6NFA1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRABD2BA6NFA1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.58■■□□□ 1.85
TRABD2BA6NFA1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TRABD2BA6NFA1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRABD2BA6NFA1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TRABD2BA6NFA1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.56■■□□□ 1.84
TRABD2BA6NFA1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRABD2BA6NFA1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRABD2BA6NFA1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRABD2BA6NFA1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRABD2BA6NFA1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRABD2BA6NFA1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.52■■□□□ 1.84
TRABD2BA6NFA1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
TRABD2BA6NFA1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.49■■□□□ 1.83
TRABD2BA6NFA1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRABD2BA6NFA1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRABD2BA6NFA1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
TRABD2BA6NFA1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRABD2BA6NFA1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.44■■□□□ 1.82
TRABD2BA6NFA1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRABD2BA6NFA1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
TRABD2BA6NFA1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms