Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TRGV5A0A0B4J1U4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRGV5A0A0B4J1U4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRGV5A0A0B4J1U4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRGV5A0A0B4J1U4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRGV5A0A0B4J1U4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.19■■□□□ 1.62
TRGV5A0A0B4J1U4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.18■■□□□ 1.62
TRGV5A0A0B4J1U4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRGV5A0A0B4J1U4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.17■■□□□ 1.62
TRGV5A0A0B4J1U4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TRGV5A0A0B4J1U4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.16■■□□□ 1.62
TRGV5A0A0B4J1U4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
TRGV5A0A0B4J1U4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRGV5A0A0B4J1U4 SUZ12P1-203ENST00000578195 985 ntBASIC25.11■■□□□ 1.61
TRGV5A0A0B4J1U4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.11■■□□□ 1.61
TRGV5A0A0B4J1U4 AL133380.1-201ENST00000506013 324 ntBASIC25.1■■□□□ 1.61
TRGV5A0A0B4J1U4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
TRGV5A0A0B4J1U4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.09■■□□□ 1.61
TRGV5A0A0B4J1U4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.08■■□□□ 1.61
TRGV5A0A0B4J1U4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRGV5A0A0B4J1U4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.07■■□□□ 1.6
TRGV5A0A0B4J1U4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRGV5A0A0B4J1U4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.04■■□□□ 1.6
TRGV5A0A0B4J1U4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRGV5A0A0B4J1U4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.03■■□□□ 1.6
TRGV5A0A0B4J1U4 CAHM-201ENST00000604200 896 ntBASIC25.02■■□□□ 1.6
TRGV5A0A0B4J1U4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRGV5A0A0B4J1U4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRGV5A0A0B4J1U4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRGV5A0A0B4J1U4 AL391121.1-201ENST00000607967 1349 ntBASIC24.98■■□□□ 1.59
TRGV5A0A0B4J1U4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRGV5A0A0B4J1U4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
TRGV5A0A0B4J1U4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRGV5A0A0B4J1U4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
TRGV5A0A0B4J1U4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRGV5A0A0B4J1U4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRGV5A0A0B4J1U4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRGV5A0A0B4J1U4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRGV5A0A0B4J1U4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TRGV5A0A0B4J1U4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRGV5A0A0B4J1U4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.93■■□□□ 1.58
TRGV5A0A0B4J1U4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRGV5A0A0B4J1U4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.91■■□□□ 1.58
TRGV5A0A0B4J1U4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRGV5A0A0B4J1U4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRGV5A0A0B4J1U4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
TRGV5A0A0B4J1U4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
TRGV5A0A0B4J1U4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRGV5A0A0B4J1U4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.86■■□□□ 1.57
TRGV5A0A0B4J1U4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.85■■□□□ 1.57
TRGV5A0A0B4J1U4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.85■■□□□ 1.57
TRGV5A0A0B4J1U4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
TRGV5A0A0B4J1U4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
TRGV5A0A0B4J1U4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRGV5A0A0B4J1U4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRGV5A0A0B4J1U4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRGV5A0A0B4J1U4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRGV5A0A0B4J1U4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRGV5A0A0B4J1U4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRGV5A0A0B4J1U4 RPS2P35-201ENST00000443417 897 ntBASIC24.78■■□□□ 1.56
TRGV5A0A0B4J1U4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.76■■□□□ 1.55
TRGV5A0A0B4J1U4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRGV5A0A0B4J1U4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRGV5A0A0B4J1U4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.75■■□□□ 1.55
TRGV5A0A0B4J1U4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRGV5A0A0B4J1U4 AP006261.1-201ENST00000584783 668 ntBASIC24.74■■□□□ 1.55
TRGV5A0A0B4J1U4 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.74■■□□□ 1.55
TRGV5A0A0B4J1U4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRGV5A0A0B4J1U4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRGV5A0A0B4J1U4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.73■■□□□ 1.55
TRGV5A0A0B4J1U4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.71■■□□□ 1.55
TRGV5A0A0B4J1U4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.71■■□□□ 1.55
TRGV5A0A0B4J1U4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRGV5A0A0B4J1U4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRGV5A0A0B4J1U4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRGV5A0A0B4J1U4 AL162393.1-201ENST00000437852 946 ntBASIC24.69■■□□□ 1.54
TRGV5A0A0B4J1U4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRGV5A0A0B4J1U4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRGV5A0A0B4J1U4 WASH5P-204ENST00000632292 975 ntBASIC24.68■■□□□ 1.54
TRGV5A0A0B4J1U4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRGV5A0A0B4J1U4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRGV5A0A0B4J1U4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRGV5A0A0B4J1U4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRGV5A0A0B4J1U4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRGV5A0A0B4J1U4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TRGV5A0A0B4J1U4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TRGV5A0A0B4J1U4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRGV5A0A0B4J1U4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.64■■□□□ 1.54
TRGV5A0A0B4J1U4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.64■■□□□ 1.54
TRGV5A0A0B4J1U4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TRGV5A0A0B4J1U4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.64■■□□□ 1.54
TRGV5A0A0B4J1U4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.64■■□□□ 1.53
TRGV5A0A0B4J1U4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRGV5A0A0B4J1U4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRGV5A0A0B4J1U4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
TRGV5A0A0B4J1U4 MIR3665-201ENST00000578708 105 ntBASIC24.61■■□□□ 1.53
TRGV5A0A0B4J1U4 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.61■■□□□ 1.53
TRGV5A0A0B4J1U4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRGV5A0A0B4J1U4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRGV5A0A0B4J1U4 MIR762-201ENST00000390236 83 ntBASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms