Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 MIR572-201ENST00000384983 95 ntBASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 AC123595.1-201ENST00000440769 1046 ntBASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 IGHV3-19-201ENST00000521488 291 ntBASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 AC012414.1-201ENST00000556676 535 ntBASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC11.84□□□□□ -0.51
KRTAP4-1Q9BYQ7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
KRTAP4-1Q9BYQ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AC135731.1-201ENST00000569415 2548 ntBASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 ID1-201ENST00000376105 1233 ntBASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 NTF6G-201ENST00000591094 616 ntBASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AL358852.1-201ENST00000623174 1268 ntBASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AC141586.4-201ENST00000624558 1573 ntBASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP4-1Q9BYQ7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 ALDH1A3-203ENST00000557963 1670 ntBASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 KRT18P14-201ENST00000534205 1250 ntBASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC11.82□□□□□ -0.52
KRTAP4-1Q9BYQ7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 TERF1P2-201ENST00000583350 1212 ntBASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 AC133637.1-201ENST00000624115 1537 ntBASIC11.81□□□□□ -0.52
KRTAP4-1Q9BYQ7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 GXYLT1P2-201ENST00000433312 1230 ntBASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC11.8□□□□□ -0.52
KRTAP4-1Q9BYQ7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms