Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AL354811.1-201ENST00000610286 706 ntBASIC22.2■■□□□ 1.14
PCDH15Q96QU1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCDH15Q96QU1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH15Q96QU1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH15Q96QU1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 TERF1P2-201ENST00000583350 1212 ntBASIC22.19■■□□□ 1.14
PCDH15Q96QU1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH15Q96QU1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDH15Q96QU1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDH15Q96QU1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDH15Q96QU1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH15Q96QU1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH15Q96QU1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDH15Q96QU1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDH15Q96QU1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH15Q96QU1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH15Q96QU1 AC010525.1-201ENST00000585559 441 ntBASIC22.14■■□□□ 1.14
PCDH15Q96QU1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH15Q96QU1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH15Q96QU1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH15Q96QU1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH15Q96QU1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 AC141586.4-201ENST00000624558 1573 ntBASIC22.13■■□□□ 1.13
PCDH15Q96QU1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH15Q96QU1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH15Q96QU1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH15Q96QU1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH15Q96QU1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH15Q96QU1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDH15Q96QU1 AL161729.1-201ENST00000604104 1402 ntBASIC22.11■■□□□ 1.13
PCDH15Q96QU1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH15Q96QU1 AC022211.4-201ENST00000625094 2161 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms