Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HPS6Q86YV9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.08■■□□□ 1.12
HPS6Q86YV9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HPS6Q86YV9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HPS6Q86YV9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HPS6Q86YV9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.07■■□□□ 1.12
HPS6Q86YV9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.07■■□□□ 1.12
HPS6Q86YV9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.07■■□□□ 1.12
HPS6Q86YV9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.07■■□□□ 1.12
HPS6Q86YV9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HPS6Q86YV9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
HPS6Q86YV9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HPS6Q86YV9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HPS6Q86YV9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
HPS6Q86YV9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HPS6Q86YV9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.06■■□□□ 1.12
HPS6Q86YV9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HPS6Q86YV9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HPS6Q86YV9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HPS6Q86YV9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.06■■□□□ 1.12
HPS6Q86YV9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
HPS6Q86YV9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
HPS6Q86YV9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HPS6Q86YV9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HPS6Q86YV9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HPS6Q86YV9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.06■■□□□ 1.12
HPS6Q86YV9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HPS6Q86YV9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.05■■□□□ 1.12
HPS6Q86YV9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
HPS6Q86YV9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
HPS6Q86YV9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.05■■□□□ 1.12
HPS6Q86YV9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HPS6Q86YV9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HPS6Q86YV9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HPS6Q86YV9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HPS6Q86YV9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
HPS6Q86YV9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 AC021242.3-201ENST00000607598 1377 ntBASIC22.04■■□□□ 1.12
HPS6Q86YV9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
HPS6Q86YV9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
HPS6Q86YV9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 UNC93B8-201ENST00000511903 705 ntBASIC22.04■■□□□ 1.12
HPS6Q86YV9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
HPS6Q86YV9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.04■■□□□ 1.12
HPS6Q86YV9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HPS6Q86YV9 ANOS2P-203ENST00000472227 1816 ntBASIC22.03■■□□□ 1.12
HPS6Q86YV9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS6Q86YV9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS6Q86YV9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS6Q86YV9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.03■■□□□ 1.12
HPS6Q86YV9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.03■■□□□ 1.12
HPS6Q86YV9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS6Q86YV9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS6Q86YV9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.02■■□□□ 1.12
HPS6Q86YV9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HPS6Q86YV9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HPS6Q86YV9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.02■■□□□ 1.12
HPS6Q86YV9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.02■■□□□ 1.12
HPS6Q86YV9 LINC00526-201ENST00000581067 1875 ntBASIC22.02■■□□□ 1.12
HPS6Q86YV9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
HPS6Q86YV9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS6Q86YV9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.01■■□□□ 1.11
HPS6Q86YV9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.01■■□□□ 1.11
HPS6Q86YV9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HPS6Q86YV9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HPS6Q86YV9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22■■□□□ 1.11
HPS6Q86YV9 AC120024.1-201ENST00000562672 995 ntBASIC22■■□□□ 1.11
HPS6Q86YV9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS6Q86YV9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22■■□□□ 1.11
HPS6Q86YV9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
HPS6Q86YV9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HPS6Q86YV9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HPS6Q86YV9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HPS6Q86YV9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.99■■□□□ 1.11
HPS6Q86YV9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.99■■□□□ 1.11
HPS6Q86YV9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
HPS6Q86YV9 GUSBP5-202ENST00000510805 1989 ntBASIC21.99■■□□□ 1.11
HPS6Q86YV9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HPS6Q86YV9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HPS6Q86YV9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HPS6Q86YV9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HPS6Q86YV9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.98■■□□□ 1.11
HPS6Q86YV9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms