RNA–Protein interactions for RNA: ENST00000308677.8

PRKACA-201, Transcript of protein kinase cAMP-activated catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKACA, Length 2,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACA-201ENST00000308677 NISCHQ9Y2I1 1504 aa44.62■■■■■ 4.73
PRKACA-201ENST00000308677 SHROOM4Q9ULL8 1493 aa38.37■■■■□ 3.73
PRKACA-201ENST00000308677 CCDC180Q9P1Z9 1646 aa37.78■■■■□ 3.64
PRKACA-201ENST00000308677 ZCCHC6Q5VYS8 1495 aaKnown RBP37.71■■■■□ 3.63
PRKACA-201ENST00000308677 SUPT5HO00267 1087 aaKnown RBP37.66■■■■□ 3.62
PRKACA-201ENST00000308677 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
PRKACA-201ENST00000308677 CHIC1Q5VXU3 224 aa36.49■■■■□ 3.43
PRKACA-201ENST00000308677 DCAF1Q9Y4B6 1507 aa36.47■■■■□ 3.43
PRKACA-201ENST00000308677 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
PRKACA-201ENST00000308677 SCRIBQ14160 1630 aa35.65■■■■□ 3.3
PRKACA-201ENST00000308677 ABCC9O60706 1549 aa35.57■■■■□ 3.28
PRKACA-201ENST00000308677 LOC105371045A0A1W2PR82 267 aa35.54■■■■□ 3.28
PRKACA-201ENST00000308677 PCGF6Q9BYE7 350 aa35.5■■■■□ 3.27
PRKACA-201ENST00000308677 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
PRKACA-201ENST00000308677 HRCP23327 699 aa35.38■■■■□ 3.25
PRKACA-201ENST00000308677 RB1CC1Q8TDY2 1594 aa35.01■■■■□ 3.2
PRKACA-201ENST00000308677 NACADO15069 1562 aa35■■■■□ 3.19
PRKACA-201ENST00000308677 TRIM41Q8WV44 630 aa35■■■■□ 3.19
PRKACA-201ENST00000308677 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
PRKACA-201ENST00000308677 FAM9AQ8IZU1 332 aaPredicted RBP34.85■■■■□ 3.17
PRKACA-201ENST00000308677 PPARGC1BQ86YN6 1023 aaKnown RBP34.8■■■■□ 3.16
PRKACA-201ENST00000308677 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
PRKACA-201ENST00000308677 TRIM26Q12899 539 aaPredicted RBP34.69■■■■□ 3.14
PRKACA-201ENST00000308677 EHMT2Q96KQ7 1210 aa34.67■■■■□ 3.14
PRKACA-201ENST00000308677 WIZO95785 1651 aa34.58■■■■□ 3.13
PRKACA-201ENST00000308677 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
PRKACA-201ENST00000308677 SMARCA4P51532 1647 aa33.96■■■■□ 3.03
PRKACA-201ENST00000308677 EIF4G1Q04637 1599 aaKnown RBP33.96■■■■□ 3.03
PRKACA-201ENST00000308677 UNC13AQ9UPW8 1703 aa33.94■■■■□ 3.02
PRKACA-201ENST00000308677 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
PRKACA-201ENST00000308677 CCDC88BA6NC98 1476 aa33.9■■■■□ 3.02
PRKACA-201ENST00000308677 ZEB1P37275 1124 aaPredicted RBP33.87■■■■□ 3.01
PRKACA-201ENST00000308677 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
PRKACA-201ENST00000308677 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
PRKACA-201ENST00000308677 SMARCA2P51531 1590 aa33.78■■■■□ 3
PRKACA-201ENST00000308677 SOGA1O94964 1423 aa33.58■■■□□ 2.97
PRKACA-201ENST00000308677 BICRAQ9NZM4 1560 aa33.54■■■□□ 2.96
PRKACA-201ENST00000308677 TTBK1Q5TCY1 1321 aaPredicted RBP33.52■■■□□ 2.96
PRKACA-201ENST00000308677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.44■■■□□ 2.94
PRKACA-201ENST00000308677 RUSC2Q8N2Y8 1516 aa33.42■■■□□ 2.94
PRKACA-201ENST00000308677 CSRNP3Q8WYN3 585 aa33.4■■■□□ 2.94
PRKACA-201ENST00000308677 CEP162Q5TB80 1403 aa33.39■■■□□ 2.94
PRKACA-201ENST00000308677 UBTFP17480 764 aaKnown RBP33.38■■■□□ 2.93
PRKACA-201ENST00000308677 CCER1Q8TC90 406 aaPredicted RBP33.32■■■□□ 2.92
PRKACA-201ENST00000308677 TNIKQ9UKE5 1360 aa33.29■■■□□ 2.92
PRKACA-201ENST00000308677 WRNQ14191 1432 aaPredicted RBP eCLIP33.25■■■□□ 2.91
PRKACA-201ENST00000308677 EEA1Q15075 1411 aa33.24■■■□□ 2.91
PRKACA-201ENST00000308677 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
PRKACA-201ENST00000308677 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
PRKACA-201ENST00000308677 GOLGA3Q08378 1498 aa33.09■■■□□ 2.89
PRKACA-201ENST00000308677 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
PRKACA-201ENST00000308677 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
PRKACA-201ENST00000308677 CEP164Q9UPV0 1460 aa32.89■■■□□ 2.86
PRKACA-201ENST00000308677 RANGAP1P46060 587 aaPredicted RBP32.86■■■□□ 2.85
PRKACA-201ENST00000308677 CLIP1P30622 1438 aa32.78■■■□□ 2.84
PRKACA-201ENST00000308677 KIF21BO75037 1637 aa32.77■■■□□ 2.84
PRKACA-201ENST00000308677 RAPGEF2Q9Y4G8 1499 aa32.73■■■□□ 2.83
PRKACA-201ENST00000308677 HNRNPUL2Q1KMD3 747 aaKnown RBP32.69■■■□□ 2.82
PRKACA-201ENST00000308677 SCAF1Q9H7N4 1312 aaKnown RBP32.65■■■□□ 2.82
PRKACA-201ENST00000308677 DIEXFQ68CQ4 756 aaKnown RBP32.63■■■□□ 2.81
PRKACA-201ENST00000308677 APLP2Q06481 763 aa32.62■■■□□ 2.81
PRKACA-201ENST00000308677 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
PRKACA-201ENST00000308677 VPS8Q8N3P4 1428 aa32.59■■■□□ 2.81
PRKACA-201ENST00000308677 NCAPD3P42695 1498 aa32.44■■■□□ 2.78
PRKACA-201ENST00000308677 BIVM-ERCC5R4GMW8 1640 aa32.42■■■□□ 2.78
PRKACA-201ENST00000308677 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
PRKACA-201ENST00000308677 ZNF316A6NFI3 1004 aaPredicted RBP32.35■■■□□ 2.77
PRKACA-201ENST00000308677 CUX1P39880 1505 aa32.33■■■□□ 2.77
PRKACA-201ENST00000308677 NEUROD1Q13562 356 aa32.33■■■□□ 2.77
PRKACA-201ENST00000308677 ACIN1Q9UKV3 1341 aaKnown RBP32.32■■■□□ 2.76
PRKACA-201ENST00000308677 PRXQ9BXM0 1461 aa32.31■■■□□ 2.76
PRKACA-201ENST00000308677 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
PRKACA-201ENST00000308677 KIF27Q86VH2 1401 aa32.22■■■□□ 2.75
PRKACA-201ENST00000308677 CFTRP13569 1480 aa32.21■■■□□ 2.75
PRKACA-201ENST00000308677 ARAP1Q96P48 1450 aa32.19■■■□□ 2.74
PRKACA-201ENST00000308677 KANK4Q5T7N3 995 aaPredicted RBP32.18■■■□□ 2.74
PRKACA-201ENST00000308677 CENPBP07199 599 aaPredicted RBP32.14■■■□□ 2.74
PRKACA-201ENST00000308677 GTF3C3Q9Y5Q9 886 aa32.02■■■□□ 2.72
PRKACA-201ENST00000308677 YTHDC1Q96MU7 727 aaKnown RBP31.99■■■□□ 2.71
PRKACA-201ENST00000308677 MIER1Q8N108 512 aa31.95■■■□□ 2.71
PRKACA-201ENST00000308677 CUX2O14529 1486 aa31.95■■■□□ 2.71
PRKACA-201ENST00000308677 ARHGAP35Q9NRY4 1499 aa31.93■■■□□ 2.7
PRKACA-201ENST00000308677 CADPSQ9ULU8 1353 aa31.9■■■□□ 2.7
PRKACA-201ENST00000308677 IGF1RP08069 1367 aa31.9■■■□□ 2.7
PRKACA-201ENST00000308677 ITGAEP38570 1179 aa31.87■■■□□ 2.69
PRKACA-201ENST00000308677 DHX57Q6P158 1386 aaKnown RBP31.87■■■□□ 2.69
PRKACA-201ENST00000308677 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
PRKACA-201ENST00000308677 RRBP1Q9P2E9 1410 aaKnown RBP31.79■■■□□ 2.68
PRKACA-201ENST00000308677 PELP1Q8IZL8 1130 aaKnown RBP31.79■■■□□ 2.68
PRKACA-201ENST00000308677 FGD5Q6ZNL6 1462 aa31.79■■■□□ 2.68
PRKACA-201ENST00000308677 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
PRKACA-201ENST00000308677 CCNB3Q8WWL7 1395 aa31.76■■■□□ 2.67
PRKACA-201ENST00000308677 CLSPNQ9HAW4 1339 aa31.74■■■□□ 2.67
PRKACA-201ENST00000308677 P3H3Q8IVL6 736 aa31.68■■■□□ 2.66
PRKACA-201ENST00000308677 CC2D2AQ9P2K1 1620 aa31.66■■■□□ 2.66
PRKACA-201ENST00000308677 ATP1B4Q9UN42 357 aaPredicted RBP31.62■■■□□ 2.65
PRKACA-201ENST00000308677 FANCD2Q9BXW9 1451 aa31.6■■■□□ 2.65
PRKACA-201ENST00000308677 TIAM1Q13009 1591 aa31.54■■■□□ 2.64
PRKACA-201ENST00000308677 RAD54L2Q9Y4B4 1467 aa31.53■■■□□ 2.64
PRKACA-201ENST00000308677 RAB3GAP2Q9H2M9 1393 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms