RNA–Protein interactions for RNA: ENST00000308677.8

PRKACA-201, Transcript of protein kinase cAMP-activated catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKACA, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACA-201ENST00000308677 NISCHQ9Y2I1 1504 aa44.62■■■■■ 4.73
PRKACA-201ENST00000308677 SHROOM4Q9ULL8 1493 aa38.37■■■■□ 3.73
PRKACA-201ENST00000308677 CCDC180Q9P1Z9 1646 aa37.78■■■■□ 3.64
PRKACA-201ENST00000308677 ZCCHC6Q5VYS8 1495 aaKnown RBP37.71■■■■□ 3.63
PRKACA-201ENST00000308677 SUPT5HO00267 1087 aaKnown RBP37.66■■■■□ 3.62
PRKACA-201ENST00000308677 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
PRKACA-201ENST00000308677 CHIC1Q5VXU3 224 aa36.49■■■■□ 3.43
PRKACA-201ENST00000308677 DCAF1Q9Y4B6 1507 aa36.47■■■■□ 3.43
PRKACA-201ENST00000308677 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
PRKACA-201ENST00000308677 SCRIBQ14160 1630 aa35.65■■■■□ 3.3
PRKACA-201ENST00000308677 ABCC9O60706 1549 aa35.57■■■■□ 3.28
PRKACA-201ENST00000308677 LOC105371045A0A1W2PR82 267 aa35.54■■■■□ 3.28
PRKACA-201ENST00000308677 PCGF6Q9BYE7 350 aa35.5■■■■□ 3.27
PRKACA-201ENST00000308677 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
PRKACA-201ENST00000308677 HRCP23327 699 aa35.38■■■■□ 3.25
PRKACA-201ENST00000308677 RB1CC1Q8TDY2 1594 aa35.01■■■■□ 3.2
PRKACA-201ENST00000308677 NACADO15069 1562 aa35■■■■□ 3.19
PRKACA-201ENST00000308677 TRIM41Q8WV44 630 aa35■■■■□ 3.19
PRKACA-201ENST00000308677 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
PRKACA-201ENST00000308677 FAM9AQ8IZU1 332 aaPredicted RBP34.85■■■■□ 3.17
PRKACA-201ENST00000308677 PPARGC1BQ86YN6 1023 aaKnown RBP34.8■■■■□ 3.16
PRKACA-201ENST00000308677 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
PRKACA-201ENST00000308677 TRIM26Q12899 539 aaPredicted RBP34.69■■■■□ 3.14
PRKACA-201ENST00000308677 EHMT2Q96KQ7 1210 aa34.67■■■■□ 3.14
PRKACA-201ENST00000308677 WIZO95785 1651 aa34.58■■■■□ 3.13
PRKACA-201ENST00000308677 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
PRKACA-201ENST00000308677 SMARCA4P51532 1647 aa33.96■■■■□ 3.03
PRKACA-201ENST00000308677 EIF4G1Q04637 1599 aaKnown RBP33.96■■■■□ 3.03
PRKACA-201ENST00000308677 UNC13AQ9UPW8 1703 aa33.94■■■■□ 3.02
PRKACA-201ENST00000308677 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
PRKACA-201ENST00000308677 CCDC88BA6NC98 1476 aa33.9■■■■□ 3.02
PRKACA-201ENST00000308677 ZEB1P37275 1124 aaPredicted RBP33.87■■■■□ 3.01
PRKACA-201ENST00000308677 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
PRKACA-201ENST00000308677 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
PRKACA-201ENST00000308677 SMARCA2P51531 1590 aa33.78■■■■□ 3
PRKACA-201ENST00000308677 SOGA1O94964 1423 aa33.58■■■□□ 2.97
PRKACA-201ENST00000308677 BICRAQ9NZM4 1560 aa33.54■■■□□ 2.96
PRKACA-201ENST00000308677 TTBK1Q5TCY1 1321 aaPredicted RBP33.52■■■□□ 2.96
PRKACA-201ENST00000308677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.44■■■□□ 2.94
PRKACA-201ENST00000308677 RUSC2Q8N2Y8 1516 aa33.42■■■□□ 2.94
PRKACA-201ENST00000308677 CSRNP3Q8WYN3 585 aa33.4■■■□□ 2.94
PRKACA-201ENST00000308677 CEP162Q5TB80 1403 aa33.39■■■□□ 2.94
PRKACA-201ENST00000308677 UBTFP17480 764 aaKnown RBP33.38■■■□□ 2.93
PRKACA-201ENST00000308677 CCER1Q8TC90 406 aaPredicted RBP33.32■■■□□ 2.92
PRKACA-201ENST00000308677 TNIKQ9UKE5 1360 aa33.29■■■□□ 2.92
PRKACA-201ENST00000308677 WRNQ14191 1432 aaPredicted RBP eCLIP33.25■■■□□ 2.91
PRKACA-201ENST00000308677 EEA1Q15075 1411 aa33.24■■■□□ 2.91
PRKACA-201ENST00000308677 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
PRKACA-201ENST00000308677 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
PRKACA-201ENST00000308677 GOLGA3Q08378 1498 aa33.09■■■□□ 2.89
PRKACA-201ENST00000308677 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
PRKACA-201ENST00000308677 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
PRKACA-201ENST00000308677 CEP164Q9UPV0 1460 aa32.89■■■□□ 2.86
PRKACA-201ENST00000308677 RANGAP1P46060 587 aaPredicted RBP32.86■■■□□ 2.85
PRKACA-201ENST00000308677 CLIP1P30622 1438 aa32.78■■■□□ 2.84
PRKACA-201ENST00000308677 KIF21BO75037 1637 aa32.77■■■□□ 2.84
PRKACA-201ENST00000308677 RAPGEF2Q9Y4G8 1499 aa32.73■■■□□ 2.83
PRKACA-201ENST00000308677 HNRNPUL2Q1KMD3 747 aaKnown RBP32.69■■■□□ 2.82
PRKACA-201ENST00000308677 SCAF1Q9H7N4 1312 aaKnown RBP32.65■■■□□ 2.82
PRKACA-201ENST00000308677 DIEXFQ68CQ4 756 aaKnown RBP32.63■■■□□ 2.81
PRKACA-201ENST00000308677 APLP2Q06481 763 aa32.62■■■□□ 2.81
PRKACA-201ENST00000308677 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
PRKACA-201ENST00000308677 VPS8Q8N3P4 1428 aa32.59■■■□□ 2.81
PRKACA-201ENST00000308677 NCAPD3P42695 1498 aa32.44■■■□□ 2.78
PRKACA-201ENST00000308677 BIVM-ERCC5R4GMW8 1640 aa32.42■■■□□ 2.78
PRKACA-201ENST00000308677 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
PRKACA-201ENST00000308677 ZNF316A6NFI3 1004 aaPredicted RBP32.35■■■□□ 2.77
PRKACA-201ENST00000308677 CUX1P39880 1505 aa32.33■■■□□ 2.77
PRKACA-201ENST00000308677 NEUROD1Q13562 356 aa32.33■■■□□ 2.77
PRKACA-201ENST00000308677 ACIN1Q9UKV3 1341 aaKnown RBP32.32■■■□□ 2.76
PRKACA-201ENST00000308677 PRXQ9BXM0 1461 aa32.31■■■□□ 2.76
PRKACA-201ENST00000308677 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
PRKACA-201ENST00000308677 KIF27Q86VH2 1401 aa32.22■■■□□ 2.75
PRKACA-201ENST00000308677 CFTRP13569 1480 aa32.21■■■□□ 2.75
PRKACA-201ENST00000308677 ARAP1Q96P48 1450 aa32.19■■■□□ 2.74
PRKACA-201ENST00000308677 KANK4Q5T7N3 995 aaPredicted RBP32.18■■■□□ 2.74
PRKACA-201ENST00000308677 CENPBP07199 599 aaPredicted RBP32.14■■■□□ 2.74
PRKACA-201ENST00000308677 GTF3C3Q9Y5Q9 886 aa32.02■■■□□ 2.72
PRKACA-201ENST00000308677 YTHDC1Q96MU7 727 aaKnown RBP31.99■■■□□ 2.71
PRKACA-201ENST00000308677 MIER1Q8N108 512 aa31.95■■■□□ 2.71
PRKACA-201ENST00000308677 CUX2O14529 1486 aa31.95■■■□□ 2.71
PRKACA-201ENST00000308677 ARHGAP35Q9NRY4 1499 aa31.93■■■□□ 2.7
PRKACA-201ENST00000308677 CADPSQ9ULU8 1353 aa31.9■■■□□ 2.7
PRKACA-201ENST00000308677 IGF1RP08069 1367 aa31.9■■■□□ 2.7
PRKACA-201ENST00000308677 ITGAEP38570 1179 aa31.87■■■□□ 2.69
PRKACA-201ENST00000308677 DHX57Q6P158 1386 aaKnown RBP31.87■■■□□ 2.69
PRKACA-201ENST00000308677 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
PRKACA-201ENST00000308677 RRBP1Q9P2E9 1410 aaKnown RBP31.79■■■□□ 2.68
PRKACA-201ENST00000308677 PELP1Q8IZL8 1130 aaKnown RBP31.79■■■□□ 2.68
PRKACA-201ENST00000308677 FGD5Q6ZNL6 1462 aa31.79■■■□□ 2.68
PRKACA-201ENST00000308677 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
PRKACA-201ENST00000308677 CCNB3Q8WWL7 1395 aa31.76■■■□□ 2.67
PRKACA-201ENST00000308677 CLSPNQ9HAW4 1339 aa31.74■■■□□ 2.67
PRKACA-201ENST00000308677 P3H3Q8IVL6 736 aa31.68■■■□□ 2.66
PRKACA-201ENST00000308677 CC2D2AQ9P2K1 1620 aa31.66■■■□□ 2.66
PRKACA-201ENST00000308677 ATP1B4Q9UN42 357 aaPredicted RBP31.62■■■□□ 2.65
PRKACA-201ENST00000308677 FANCD2Q9BXW9 1451 aa31.6■■■□□ 2.65
PRKACA-201ENST00000308677 TIAM1Q13009 1591 aa31.54■■■□□ 2.64
PRKACA-201ENST00000308677 RAD54L2Q9Y4B4 1467 aa31.53■■■□□ 2.64
PRKACA-201ENST00000308677 RAB3GAP2Q9H2M9 1393 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms