RNA–Protein interactions for RNA: ENST00000540200.5

POLDIP2-201, Transcript of DNA polymerase delta interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLDIP2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP2-201ENST00000540200 NISCHQ9Y2I1 1504 aa49.75■■■■■ 5.56
POLDIP2-201ENST00000540200 CCDC180Q9P1Z9 1646 aa42.99■■■■■ 4.47
POLDIP2-201ENST00000540200 ZCCHC6Q5VYS8 1495 aaKnown RBP41.86■■■■■ 4.29
POLDIP2-201ENST00000540200 DCAF8L2P0C7V8 631 aa41.23■■■■■ 4.19
POLDIP2-201ENST00000540200 SHROOM4Q9ULL8 1493 aa41.15■■■■■ 4.18
POLDIP2-201ENST00000540200 DCAF1Q9Y4B6 1507 aa41.02■■■■■ 4.16
POLDIP2-201ENST00000540200 ABCC9O60706 1549 aa40.54■■■■■ 4.08
POLDIP2-201ENST00000540200 MYO15BQ96JP2 1530 aa40.34■■■■■ 4.05
POLDIP2-201ENST00000540200 NACADO15069 1562 aa40.01■■■■■ 4
POLDIP2-201ENST00000540200 SUPT5HO00267 1087 aaKnown RBP39.83■■■■□ 3.97
POLDIP2-201ENST00000540200 SCRIBQ14160 1630 aa39.8■■■■□ 3.96
POLDIP2-201ENST00000540200 RB1CC1Q8TDY2 1594 aa39.58■■■■□ 3.93
POLDIP2-201ENST00000540200 RSF1Q96T23 1441 aaPredicted RBP38.85■■■■□ 3.81
POLDIP2-201ENST00000540200 UNC13AQ9UPW8 1703 aa38.81■■■■□ 3.8
POLDIP2-201ENST00000540200 CECR2Q9BXF3 1484 aa38.74■■■■□ 3.79
POLDIP2-201ENST00000540200 MROH2BQ7Z745 1585 aa38.52■■■■□ 3.76
POLDIP2-201ENST00000540200 BICRAQ9NZM4 1560 aa38.45■■■■□ 3.75
POLDIP2-201ENST00000540200 PABPN1Q86U42 306 aaKnown RBP eCLIP38.44■■■■□ 3.74
POLDIP2-201ENST00000540200 BAZ1AQ9NRL2 1556 aaPredicted RBP38.33■■■■□ 3.73
POLDIP2-201ENST00000540200 CHIC1Q5VXU3 224 aa38.3■■■■□ 3.72
POLDIP2-201ENST00000540200 WIZO95785 1651 aa38.21■■■■□ 3.71
POLDIP2-201ENST00000540200 SMARCA4P51532 1647 aa38.11■■■■□ 3.69
POLDIP2-201ENST00000540200 TOP2AP11388 1531 aaKnown RBP37.73■■■■□ 3.63
POLDIP2-201ENST00000540200 PEG3Q9GZU2 1588 aa37.58■■■■□ 3.61
POLDIP2-201ENST00000540200 CCDC88BA6NC98 1476 aa37.47■■■■□ 3.59
POLDIP2-201ENST00000540200 ATAD2BQ9ULI0 1458 aa37.44■■■■□ 3.58
POLDIP2-201ENST00000540200 SMARCA2P51531 1590 aa37.44■■■■□ 3.58
POLDIP2-201ENST00000540200 TRIM41Q8WV44 630 aa37.34■■■■□ 3.57
POLDIP2-201ENST00000540200 EIF4G1Q04637 1599 aaKnown RBP37.27■■■■□ 3.56
POLDIP2-201ENST00000540200 BAZ1BQ9UIG0 1483 aaKnown RBP37.24■■■■□ 3.55
POLDIP2-201ENST00000540200 NCAPD3P42695 1498 aa37.01■■■■□ 3.52
POLDIP2-201ENST00000540200 LOC105371045A0A1W2PR82 267 aa36.97■■■■□ 3.51
POLDIP2-201ENST00000540200 HMGXB3Q12766 1538 aa36.92■■■■□ 3.5
POLDIP2-201ENST00000540200 ABCC8Q09428 1581 aa36.86■■■■□ 3.49
POLDIP2-201ENST00000540200 FAM9AQ8IZU1 332 aaPredicted RBP36.78■■■■□ 3.48
POLDIP2-201ENST00000540200 CC2D2AQ9P2K1 1620 aa36.6■■■■□ 3.45
POLDIP2-201ENST00000540200 WRNQ14191 1432 aaPredicted RBP eCLIP36.53■■■■□ 3.44
POLDIP2-201ENST00000540200 SYNJ1O43426 1573 aa36.34■■■■□ 3.41
POLDIP2-201ENST00000540200 CFTRP13569 1480 aa36.34■■■■□ 3.41
POLDIP2-201ENST00000540200 EHMT2Q96KQ7 1210 aa36.34■■■■□ 3.41
POLDIP2-201ENST00000540200 SOGA1O94964 1423 aa36.31■■■■□ 3.4
POLDIP2-201ENST00000540200 RUSC2Q8N2Y8 1516 aa36.16■■■■□ 3.38
POLDIP2-201ENST00000540200 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
POLDIP2-201ENST00000540200 EEA1Q15075 1411 aa36.14■■■■□ 3.38
POLDIP2-201ENST00000540200 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
POLDIP2-201ENST00000540200 CSRNP3Q8WYN3 585 aa36.07■■■■□ 3.37
POLDIP2-201ENST00000540200 BIVM-ERCC5R4GMW8 1640 aa36■■■■□ 3.35
POLDIP2-201ENST00000540200 PRDM2Q13029 1718 aa35.98■■■■□ 3.35
POLDIP2-201ENST00000540200 CUX1P39880 1505 aa35.96■■■■□ 3.35
POLDIP2-201ENST00000540200 DNAJC5BQ9UF47 199 aa35.82■■■■□ 3.32
POLDIP2-201ENST00000540200 NESP48681 1621 aa35.75■■■■□ 3.31
POLDIP2-201ENST00000540200 FANCD2Q9BXW9 1451 aa35.74■■■■□ 3.31
POLDIP2-201ENST00000540200 TNIKQ9UKE5 1360 aa35.74■■■■□ 3.31
POLDIP2-201ENST00000540200 GOLGA3Q08378 1498 aa35.72■■■■□ 3.31
POLDIP2-201ENST00000540200 PCGF6Q9BYE7 350 aa35.72■■■■□ 3.31
POLDIP2-201ENST00000540200 UBTFP17480 764 aaKnown RBP35.71■■■■□ 3.31
POLDIP2-201ENST00000540200 CEP164Q9UPV0 1460 aa35.68■■■■□ 3.3
POLDIP2-201ENST00000540200 KIF21BO75037 1637 aa35.64■■■■□ 3.3
POLDIP2-201ENST00000540200 CEP162Q5TB80 1403 aa35.61■■■■□ 3.29
POLDIP2-201ENST00000540200 LAMC3Q9Y6N6 1575 aa35.61■■■■□ 3.29
POLDIP2-201ENST00000540200 KIF27Q86VH2 1401 aa35.54■■■■□ 3.28
POLDIP2-201ENST00000540200 RAPGEF2Q9Y4G8 1499 aa35.51■■■■□ 3.28
POLDIP2-201ENST00000540200 TRIM26Q12899 539 aaPredicted RBP35.5■■■■□ 3.27
POLDIP2-201ENST00000540200 FGD5Q6ZNL6 1462 aa35.5■■■■□ 3.27
POLDIP2-201ENST00000540200 PRXQ9BXM0 1461 aa35.42■■■■□ 3.26
POLDIP2-201ENST00000540200 DNMBPQ6XZF7 1577 aa35.42■■■■□ 3.26
POLDIP2-201ENST00000540200 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
POLDIP2-201ENST00000540200 TOPBP1Q92547 1522 aa35.39■■■■□ 3.26
POLDIP2-201ENST00000540200 CUX2O14529 1486 aa35.38■■■■□ 3.25
POLDIP2-201ENST00000540200 ERICH3Q5RHP9 1530 aa35.32■■■■□ 3.24
POLDIP2-201ENST00000540200 POLA1P09884 1462 aaPredicted RBP35.27■■■■□ 3.24
POLDIP2-201ENST00000540200 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
POLDIP2-201ENST00000540200 IGF1RP08069 1367 aa35.26■■■■□ 3.23
POLDIP2-201ENST00000540200 PPARGC1BQ86YN6 1023 aaKnown RBP35.24■■■■□ 3.23
POLDIP2-201ENST00000540200 CLIP1P30622 1438 aa35.23■■■■□ 3.23
POLDIP2-201ENST00000540200 RAD54L2Q9Y4B4 1467 aa35.23■■■■□ 3.23
POLDIP2-201ENST00000540200 KIF21AQ7Z4S6 1674 aa35.18■■■■□ 3.22
POLDIP2-201ENST00000540200 ABCA10Q8WWZ4 1543 aa35.15■■■■□ 3.22
POLDIP2-201ENST00000540200 RANGAP1P46060 587 aaPredicted RBP35.11■■■■□ 3.21
POLDIP2-201ENST00000540200 CARMIL1Q5VZK9 1371 aa35.07■■■■□ 3.2
POLDIP2-201ENST00000540200 HRCP23327 699 aa34.98■■■■□ 3.19
POLDIP2-201ENST00000540200 VPS8Q8N3P4 1428 aa34.95■■■■□ 3.19
POLDIP2-201ENST00000540200 WDR97A6NE52 1622 aa34.91■■■■□ 3.18
POLDIP2-201ENST00000540200 MRC2Q9UBG0 1479 aa34.89■■■■□ 3.18
POLDIP2-201ENST00000540200 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
POLDIP2-201ENST00000540200 TTBK1Q5TCY1 1321 aaPredicted RBP34.86■■■■□ 3.17
POLDIP2-201ENST00000540200 ARAP1Q96P48 1450 aa34.8■■■■□ 3.16
POLDIP2-201ENST00000540200 ABCA5Q8WWZ7 1642 aa34.79■■■■□ 3.16
POLDIP2-201ENST00000540200 TARBP1Q13395 1621 aaKnown RBP34.78■■■■□ 3.16
POLDIP2-201ENST00000540200 GAPVD1Q14C86 1478 aa34.78■■■■□ 3.16
POLDIP2-201ENST00000540200 CUL7Q14999 1698 aa34.75■■■■□ 3.15
POLDIP2-201ENST00000540200 ARHGAP35Q9NRY4 1499 aa34.73■■■■□ 3.15
POLDIP2-201ENST00000540200 APLP2Q06481 763 aa34.68■■■■□ 3.14
POLDIP2-201ENST00000540200 WDR62O43379 1518 aa34.66■■■■□ 3.14
POLDIP2-201ENST00000540200 ERCC6Q03468 1493 aa34.66■■■■□ 3.14
POLDIP2-201ENST00000540200 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.121e-6■■■■■ 38.5
POLDIP2-201ENST00000540200 IFT140Q96RY7 1462 aa34.53■■■■□ 3.12
POLDIP2-201ENST00000540200 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
POLDIP2-201ENST00000540200 THOC2Q8NI27 1593 aaKnown RBP34.45■■■■□ 3.1
POLDIP2-201ENST00000540200 PBRM1Q86U86 1689 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms